RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CNTLNQ9NXG0 1405 aa16.67■□□□□ 0.26
USP6NL-206ENST00000609853 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
USP6NL-206ENST00000609853 FANCAO15360 1455 aa16.66■□□□□ 0.26
USP6NL-206ENST00000609853 ZFYVE16Q7Z3T8 1539 aa16.66■□□□□ 0.26
USP6NL-206ENST00000609853 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
USP6NL-206ENST00000609853 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
USP6NL-206ENST00000609853 KDM5CP41229 1560 aa16.63■□□□□ 0.25
USP6NL-206ENST00000609853 INO80Q9ULG1 1556 aaPredicted RBP16.63■□□□□ 0.25
USP6NL-206ENST00000609853 USP47Q96K76 1375 aa16.63■□□□□ 0.25
USP6NL-206ENST00000609853 ATP7AQ04656 1500 aa16.61■□□□□ 0.25
USP6NL-206ENST00000609853 DEPDC5O75140 1603 aa16.61■□□□□ 0.25
USP6NL-206ENST00000609853 PLA2R1Q13018 1463 aa16.61■□□□□ 0.25
USP6NL-206ENST00000609853 CFAP74Q9C0B2 1584 aa16.6■□□□□ 0.25
USP6NL-206ENST00000609853 ADGRL1O94910 1474 aa16.6■□□□□ 0.25
USP6NL-206ENST00000609853 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
USP6NL-206ENST00000609853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.59■□□□□ 0.25
USP6NL-206ENST00000609853 C11orf95C9JLR9 678 aaPredicted RBP16.59■□□□□ 0.25
USP6NL-206ENST00000609853 KIF7Q2M1P5 1343 aa16.59■□□□□ 0.25
USP6NL-206ENST00000609853 AFAP1Q8N556 730 aa16.58■□□□□ 0.24
USP6NL-206ENST00000609853 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
USP6NL-206ENST00000609853 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
USP6NL-206ENST00000609853 ZNF326Q5BKZ1 582 aaKnown RBP16.57■□□□□ 0.24
USP6NL-206ENST00000609853 ROCK2O75116 1388 aaKnown RBP16.56■□□□□ 0.24
USP6NL-206ENST00000609853 LAMC1P11047 1609 aa16.56■□□□□ 0.24
USP6NL-206ENST00000609853 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
USP6NL-206ENST00000609853 PRAG1Q86YV5 1406 aa16.55■□□□□ 0.24
USP6NL-206ENST00000609853 TRPM1Q7Z4N2 1603 aa16.55■□□□□ 0.24
USP6NL-206ENST00000609853 TET3O43151 1660 aa16.55■□□□□ 0.24
USP6NL-206ENST00000609853 KANK1Q14678 1352 aa16.55■□□□□ 0.24
USP6NL-206ENST00000609853 STAC3Q96MF2 364 aa16.54■□□□□ 0.24
USP6NL-206ENST00000609853 ZNF518AQ6AHZ1 1483 aa16.54■□□□□ 0.24
USP6NL-206ENST00000609853 VWDEQ8N2E2 1590 aa16.54■□□□□ 0.24
USP6NL-206ENST00000609853 BCORL1Q5H9F3 1711 aa16.54■□□□□ 0.24
USP6NL-206ENST00000609853 E9PCH4 1651 aa16.54■□□□□ 0.24
USP6NL-206ENST00000609853 DHX29Q7Z478 1369 aaKnown RBP16.53■□□□□ 0.24
USP6NL-206ENST00000609853 A2MP01023 1474 aa16.52■□□□□ 0.24
USP6NL-206ENST00000609853 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.24
USP6NL-206ENST00000609853 TRPM2O94759 1503 aa16.52■□□□□ 0.23
USP6NL-206ENST00000609853 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.23
USP6NL-206ENST00000609853 PTPRTO14522 1441 aa16.51■□□□□ 0.23
USP6NL-206ENST00000609853 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
USP6NL-206ENST00000609853 SPHKAPQ2M3C7 1700 aa16.51■□□□□ 0.23
USP6NL-206ENST00000609853 CD109Q6YHK3 1445 aa16.51■□□□□ 0.23
USP6NL-206ENST00000609853 PRDM15P57071 1507 aaPredicted RBP16.51■□□□□ 0.23
USP6NL-206ENST00000609853 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
USP6NL-206ENST00000609853 KIDINS220Q9ULH0 1771 aa16.5■□□□□ 0.23
USP6NL-206ENST00000609853 CEP152O94986 1710 aa16.49■□□□□ 0.23
USP6NL-206ENST00000609853 MSH5O43196 834 aa16.48■□□□□ 0.23
USP6NL-206ENST00000609853 NEO1Q92859 1461 aa16.46■□□□□ 0.23
USP6NL-206ENST00000609853 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
USP6NL-206ENST00000609853 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
USP6NL-206ENST00000609853 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
USP6NL-206ENST00000609853 MROH1Q8NDA8 1641 aa16.45■□□□□ 0.22
USP6NL-206ENST00000609853 RNF17Q9BXT8 1623 aaKnown RBP16.45■□□□□ 0.22
USP6NL-206ENST00000609853 ST20-MTHFSA0A0A6YYL1 179 aa16.45■□□□□ 0.22
USP6NL-206ENST00000609853 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
USP6NL-206ENST00000609853 LMTK2Q8IWU2 1503 aa16.44■□□□□ 0.22
USP6NL-206ENST00000609853 KIF3BO15066 747 aa16.44■□□□□ 0.22
USP6NL-206ENST00000609853 HECW2Q9P2P5 1572 aa16.42■□□□□ 0.22
USP6NL-206ENST00000609853 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
USP6NL-206ENST00000609853 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
USP6NL-206ENST00000609853 EFCAB6Q5THR3 1501 aa16.41■□□□□ 0.22
USP6NL-206ENST00000609853 MADDQ8WXG6 1647 aa16.39■□□□□ 0.22
USP6NL-206ENST00000609853 RIMBP3CA6NJZ7 1639 aa16.39■□□□□ 0.21
USP6NL-206ENST00000609853 RIMBP3BA6NNM3 1639 aa16.39■□□□□ 0.21
USP6NL-206ENST00000609853 RIMBP3Q9UFD9 1639 aa16.39■□□□□ 0.21
USP6NL-206ENST00000609853 KIAA1210Q9ULL0 1709 aa16.38■□□□□ 0.21
USP6NL-206ENST00000609853 GLI2P10070 1586 aa16.38■□□□□ 0.21
USP6NL-206ENST00000609853 KIF1BO60333 1816 aa16.37■□□□□ 0.21
USP6NL-206ENST00000609853 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
USP6NL-206ENST00000609853 MRS2Q9HD23 443 aa16.37■□□□□ 0.21
USP6NL-206ENST00000609853 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
USP6NL-206ENST00000609853 MAP3K4Q9Y6R4 1608 aa16.37■□□□□ 0.21
USP6NL-206ENST00000609853 NBPF1Q3BBV0 1214 aa16.36■□□□□ 0.21
USP6NL-206ENST00000609853 HNRNPUQ00839 825 aaKnown RBP eCLIP16.36■□□□□ 0.21
USP6NL-206ENST00000609853 COL17A1Q9UMD9 1497 aaPredicted RBP16.36■□□□□ 0.21
USP6NL-206ENST00000609853 PPRC1Q5VV67 1664 aaKnown RBP16.35■□□□□ 0.21
USP6NL-206ENST00000609853 POLR3GLQ9BT43 218 aa16.35■□□□□ 0.21
USP6NL-206ENST00000609853 FRMPD1Q5SYB0 1578 aa16.34■□□□□ 0.21
USP6NL-206ENST00000609853 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
USP6NL-206ENST00000609853 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.21
USP6NL-206ENST00000609853 MYOM2P54296 1465 aa16.33■□□□□ 0.2
USP6NL-206ENST00000609853 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
USP6NL-206ENST00000609853 RALBP1Q15311 655 aa16.33■□□□□ 0.2
USP6NL-206ENST00000609853 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
USP6NL-206ENST00000609853 TESK2Q96S53 571 aa16.32■□□□□ 0.2
USP6NL-206ENST00000609853 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
USP6NL-206ENST00000609853 TMF1P82094 1093 aa16.31■□□□□ 0.2
USP6NL-206ENST00000609853 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
USP6NL-206ENST00000609853 NEFLP07196 543 aa16.31■□□□□ 0.2
USP6NL-206ENST00000609853 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
USP6NL-206ENST00000609853 SCAF11Q99590 1463 aaKnown RBP16.3■□□□□ 0.2
USP6NL-206ENST00000609853 IFT172Q9UG01 1749 aa16.3■□□□□ 0.2
USP6NL-206ENST00000609853 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
USP6NL-206ENST00000609853 ZBED9Q6R2W3 1325 aa16.29■□□□□ 0.2
USP6NL-206ENST00000609853 EIF3AQ14152 1382 aaKnown RBP16.28■□□□□ 0.2
USP6NL-206ENST00000609853 CDCA8Q53HL2 280 aa16.28■□□□□ 0.2
USP6NL-206ENST00000609853 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.2
USP6NL-206ENST00000609853 BRD4O60885 1362 aaPredicted RBP16.27■□□□□ 0.2
USP6NL-206ENST00000609853 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms