RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 SETD1BQ9UPS6 1966 aaKnown RBP21.85■■□□□ 1.09
HDDC2-206ENST00000608461 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
HDDC2-206ENST00000608461 RRBP1Q9P2E9 1410 aaKnown RBP21.84■■□□□ 1.09
HDDC2-206ENST00000608461 RRP7BPQ9NSQ0 103 aa21.84■■□□□ 1.09
HDDC2-206ENST00000608461 CLTCQ00610 1675 aaKnown RBP21.82■■□□□ 1.08
HDDC2-206ENST00000608461 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
HDDC2-206ENST00000608461 KDM5DQ9BY66 1539 aa21.81■■□□□ 1.08
HDDC2-206ENST00000608461 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
HDDC2-206ENST00000608461 NPATQ14207 1427 aa21.8■■□□□ 1.08
HDDC2-206ENST00000608461 ROCK1Q13464 1354 aa21.8■■□□□ 1.08
HDDC2-206ENST00000608461 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
HDDC2-206ENST00000608461 PLPPR3Q6T4P5 718 aa21.79■■□□□ 1.08
HDDC2-206ENST00000608461 ZC3H13Q5T200 1668 aaKnown RBP21.78■■□□□ 1.08
HDDC2-206ENST00000608461 PREX1Q8TCU6 1659 aa21.78■■□□□ 1.08
HDDC2-206ENST00000608461 LMTK3Q96Q04 1460 aa21.77■■□□□ 1.08
HDDC2-206ENST00000608461 PTPRKQ15262 1439 aa21.76■■□□□ 1.07
HDDC2-206ENST00000608461 DEPDC5O75140 1603 aa21.74■■□□□ 1.07
HDDC2-206ENST00000608461 PRDM15P57071 1507 aaPredicted RBP21.74■■□□□ 1.07
HDDC2-206ENST00000608461 MROH1Q8NDA8 1641 aa21.73■■□□□ 1.07
HDDC2-206ENST00000608461 UHRF1BP1Q6BDS2 1440 aa21.73■■□□□ 1.07
HDDC2-206ENST00000608461 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
HDDC2-206ENST00000608461 KANK1Q14678 1352 aa21.72■■□□□ 1.07
HDDC2-206ENST00000608461 PZPP20742 1482 aa21.71■■□□□ 1.07
HDDC2-206ENST00000608461 ABCC3O15438 1527 aa21.71■■□□□ 1.07
HDDC2-206ENST00000608461 ITGAEP38570 1179 aa21.67■■□□□ 1.06
HDDC2-206ENST00000608461 ARHGAP31Q2M1Z3 1444 aa21.65■■□□□ 1.06
HDDC2-206ENST00000608461 VWDEQ8N2E2 1590 aa21.65■■□□□ 1.06
HDDC2-206ENST00000608461 LMTK2Q8IWU2 1503 aa21.65■■□□□ 1.06
HDDC2-206ENST00000608461 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.05
HDDC2-206ENST00000608461 CEP152O94986 1710 aa21.63■■□□□ 1.05
HDDC2-206ENST00000608461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.055e-7■■■□□ 18.3
HDDC2-206ENST00000608461 ZNF142P52746 1687 aaPredicted RBP21.61■■□□□ 1.05
HDDC2-206ENST00000608461 MYO3AQ8NEV4 1616 aa21.61■■□□□ 1.05
HDDC2-206ENST00000608461 TNRQ92752 1358 aa21.61■■□□□ 1.05
HDDC2-206ENST00000608461 HSPA2P54652 639 aa21.6■■□□□ 1.05
HDDC2-206ENST00000608461 FBXO31Q5XUX0 539 aaPredicted RBP21.6■■□□□ 1.05
HDDC2-206ENST00000608461 UNC13BO14795 1591 aa21.6■■□□□ 1.05
HDDC2-206ENST00000608461 SPATA31D1Q6ZQQ2 1576 aa21.6■■□□□ 1.05
HDDC2-206ENST00000608461 NLRP1Q9C000 1473 aa21.58■■□□□ 1.05
HDDC2-206ENST00000608461 CEP170BQ9Y4F5 1589 aaPredicted RBP21.57■■□□□ 1.04
HDDC2-206ENST00000608461 A2ML1A8K2U0 1454 aa21.57■■□□□ 1.04
HDDC2-206ENST00000608461 ERVK-7P63135 1459 aa21.56■■□□□ 1.04
HDDC2-206ENST00000608461 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
HDDC2-206ENST00000608461 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
HDDC2-206ENST00000608461 RPRD2Q5VT52 1461 aaKnown RBP21.55■■□□□ 1.04
HDDC2-206ENST00000608461 NAIPQ13075 1403 aa21.55■■□□□ 1.04
HDDC2-206ENST00000608461 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
HDDC2-206ENST00000608461 EFCAB6Q5THR3 1501 aa21.54■■□□□ 1.04
HDDC2-206ENST00000608461 TET3O43151 1660 aa21.53■■□□□ 1.04
HDDC2-206ENST00000608461 PLA2R1Q13018 1463 aa21.52■■□□□ 1.04
HDDC2-206ENST00000608461 IQGAP3Q86VI3 1631 aa21.51■■□□□ 1.03
HDDC2-206ENST00000608461 NUP155O75694 1391 aa21.49■■□□□ 1.03
HDDC2-206ENST00000608461 STRCQ7RTU9 1775 aa21.49■■□□□ 1.03
HDDC2-206ENST00000608461 THEMISQ8N1K5 641 aaPredicted RBP21.49■■□□□ 1.03
HDDC2-206ENST00000608461 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
HDDC2-206ENST00000608461 CFAP65Q6ZU64 1925 aaKnown RBP21.49■■□□□ 1.03
HDDC2-206ENST00000608461 PKD2Q13563 968 aa21.47■■□□□ 1.03
HDDC2-206ENST00000608461 UGGT1Q9NYU2 1555 aa21.47■■□□□ 1.03
HDDC2-206ENST00000608461 NOS1P29475 1434 aa21.46■■□□□ 1.03
HDDC2-206ENST00000608461 SLC52A1Q9NWF4 448 aa21.45■■□□□ 1.02
HDDC2-206ENST00000608461 PTPRTO14522 1441 aa21.45■■□□□ 1.02
HDDC2-206ENST00000608461 KDM5AP29375 1690 aaKnown RBP21.43■■□□□ 1.02
HDDC2-206ENST00000608461 E9PCH4 1651 aa21.4■■□□□ 1.02
HDDC2-206ENST00000608461 UBR1Q8IWV7 1749 aa21.39■■□□□ 1.01
HDDC2-206ENST00000608461 ANKLE2Q86XL3 938 aa21.39■■□□□ 1.01
HDDC2-206ENST00000608461 SYNMO15061 1565 aa21.39■■□□□ 1.01
HDDC2-206ENST00000608461 IDI1Q13907 227 aa21.38■■□□□ 1.01
HDDC2-206ENST00000608461 PIK3C2BO00750 1634 aa21.36■■□□□ 1.01
HDDC2-206ENST00000608461 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
HDDC2-206ENST00000608461 NCKAP5LQ9HCH0 1330 aa21.35■■□□□ 1.01
HDDC2-206ENST00000608461 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
HDDC2-206ENST00000608461 STAG3Q9UJ98 1225 aa21.34■■□□□ 1.01
HDDC2-206ENST00000608461 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
HDDC2-206ENST00000608461 SLIT1O75093 1534 aa21.34■■□□□ 1.01
HDDC2-206ENST00000608461 MED14O60244 1454 aa21.32■■□□□ 1
HDDC2-206ENST00000608461 ARHGAP23Q9P227 1491 aa21.32■■□□□ 1
HDDC2-206ENST00000608461 ADGRB3O60242 1522 aa21.3■■□□□ 1
HDDC2-206ENST00000608461 NEURL4Q96JN8 1562 aa21.29■■□□□ 1
HDDC2-206ENST00000608461 TMEM2Q9UHN6 1383 aa21.29■■□□□ 1
HDDC2-206ENST00000608461 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
HDDC2-206ENST00000608461 EID1Q9Y6B2 187 aa21.29■■□□□ 1
HDDC2-206ENST00000608461 SPHKAPQ2M3C7 1700 aa21.29■■□□□ 1
HDDC2-206ENST00000608461 HRCP23327 699 aa21.28■■□□□ 1
HDDC2-206ENST00000608461 SCAF11Q99590 1463 aaKnown RBP21.27■■□□□ 1
HDDC2-206ENST00000608461 HDGFP51858 240 aaKnown RBP21.27■■□□□ 1
HDDC2-206ENST00000608461 NPHP4O75161 1426 aaPredicted RBP21.26■□□□□ 0.99
HDDC2-206ENST00000608461 TMEM131LA2VDJ0 1609 aa21.26■□□□□ 0.99
HDDC2-206ENST00000608461 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
HDDC2-206ENST00000608461 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
HDDC2-206ENST00000608461 TRPM2O94759 1503 aa21.24■□□□□ 0.99
HDDC2-206ENST00000608461 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
HDDC2-206ENST00000608461 LTKP29376 864 aa21.22■□□□□ 0.99
HDDC2-206ENST00000608461 MPHOSPH9Q99550 1183 aa21.22■□□□□ 0.99
HDDC2-206ENST00000608461 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
HDDC2-206ENST00000608461 CERKQ8TCT0 537 aa21.19■□□□□ 0.98
HDDC2-206ENST00000608461 LTBP4Q8N2S1 1624 aa21.18■□□□□ 0.98
HDDC2-206ENST00000608461 MYO5BQ9ULV0 1848 aa21.18■□□□□ 0.98
HDDC2-206ENST00000608461 ZFYVE9O95405 1425 aa21.18■□□□□ 0.98
HDDC2-206ENST00000608461 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
HDDC2-206ENST00000608461 RIMS2Q9UQ26 1411 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms