RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 DUOX2Q9NRD8 1548 aa34.91■■■■□ 3.18
CCDC9-204ENST00000599398 KIF15Q9NS87 1388 aa34.9■■■■□ 3.18
CCDC9-204ENST00000599398 WASHC2CQ9Y4E1 1318 aa34.9■■■■□ 3.18
CCDC9-204ENST00000599398 RRP7BPQ9NSQ0 103 aa34.9■■■■□ 3.18
CCDC9-204ENST00000599398 EIF2AK4Q9P2K8 1649 aaKnown RBP34.89■■■■□ 3.18
CCDC9-204ENST00000599398 PPARGC1BQ86YN6 1023 aaKnown RBP34.89■■■■□ 3.18
CCDC9-204ENST00000599398 CHIC2Q9UKJ5 165 aa34.89■■■■□ 3.18
CCDC9-204ENST00000599398 FAM135AQ9P2D6 1515 aa34.87■■■■□ 3.17
CCDC9-204ENST00000599398 PTPRKQ15262 1439 aa34.87■■■■□ 3.17
CCDC9-204ENST00000599398 RNF17Q9BXT8 1623 aaKnown RBP34.86■■■■□ 3.17
CCDC9-204ENST00000599398 ANKRD30AQ9BXX3 1397 aa34.82■■■■□ 3.16
CCDC9-204ENST00000599398 ERBINQ96RT1 1412 aa34.79■■■■□ 3.16
CCDC9-204ENST00000599398 MYO3AQ8NEV4 1616 aa34.78■■■■□ 3.16
CCDC9-204ENST00000599398 PZPP20742 1482 aa34.76■■■■□ 3.15
CCDC9-204ENST00000599398 MROH1Q8NDA8 1641 aa34.75■■■■□ 3.15
CCDC9-204ENST00000599398 FBXO31Q5XUX0 539 aaPredicted RBP34.75■■■■□ 3.15
CCDC9-204ENST00000599398 ZC3H13Q5T200 1668 aaKnown RBP34.75■■■■□ 3.15
CCDC9-204ENST00000599398 STRCQ7RTU9 1775 aa34.74■■■■□ 3.15
CCDC9-204ENST00000599398 ABCC3O15438 1527 aa34.74■■■■□ 3.15
CCDC9-204ENST00000599398 NCOA1Q15788 1441 aa34.73■■■■□ 3.15
CCDC9-204ENST00000599398 ZNF142P52746 1687 aaPredicted RBP34.71■■■■□ 3.15
CCDC9-204ENST00000599398 CEP170BQ9Y4F5 1589 aaPredicted RBP34.7■■■■□ 3.15
CCDC9-204ENST00000599398 CEP152O94986 1710 aa34.7■■■■□ 3.15
CCDC9-204ENST00000599398 TNRQ92752 1358 aa34.7■■■■□ 3.15
CCDC9-204ENST00000599398 ADGRL2O95490 1459 aa34.7■■■■□ 3.15
CCDC9-204ENST00000599398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.69■■■■□ 3.143e-8■■■■□ 26.5
CCDC9-204ENST00000599398 CAMSAP1Q5T5Y3 1602 aa34.68■■■■□ 3.14
CCDC9-204ENST00000599398 DMRT2Q9Y5R5 561 aa34.68■■■■□ 3.14
CCDC9-204ENST00000599398 PRDM15P57071 1507 aaPredicted RBP34.66■■■■□ 3.14
CCDC9-204ENST00000599398 A2ML1A8K2U0 1454 aa34.63■■■■□ 3.13
CCDC9-204ENST00000599398 DEPDC5O75140 1603 aa34.63■■■■□ 3.13
CCDC9-204ENST00000599398 KANK1Q14678 1352 aa34.62■■■■□ 3.13
CCDC9-204ENST00000599398 CFAP65Q6ZU64 1925 aaKnown RBP34.61■■■■□ 3.13
CCDC9-204ENST00000599398 ITGAEP38570 1179 aa34.6■■■■□ 3.13
CCDC9-204ENST00000599398 ILDR1Q86SU0 546 aaPredicted RBP34.57■■■■□ 3.12
CCDC9-204ENST00000599398 ANKRD50Q9ULJ7 1429 aa34.56■■■■□ 3.12
CCDC9-204ENST00000599398 PTPRTO14522 1441 aa34.55■■■■□ 3.12
CCDC9-204ENST00000599398 NCKAP5LQ9HCH0 1330 aa34.55■■■■□ 3.12
CCDC9-204ENST00000599398 ERVK-7P63135 1459 aa34.54■■■■□ 3.12
CCDC9-204ENST00000599398 SPATA31D1Q6ZQQ2 1576 aa34.53■■■■□ 3.12
CCDC9-204ENST00000599398 PLA2R1Q13018 1463 aa34.53■■■■□ 3.12
CCDC9-204ENST00000599398 NLRP1Q9C000 1473 aa34.53■■■■□ 3.12
CCDC9-204ENST00000599398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.53■■■■□ 3.12
CCDC9-204ENST00000599398 ROCK1Q13464 1354 aa34.49■■■■□ 3.11
CCDC9-204ENST00000599398 ARHGAP31Q2M1Z3 1444 aa34.49■■■■□ 3.11
CCDC9-204ENST00000599398 PKD2Q13563 968 aa34.49■■■■□ 3.11
CCDC9-204ENST00000599398 VWDEQ8N2E2 1590 aa34.47■■■■□ 3.11
CCDC9-204ENST00000599398 UGGT1Q9NYU2 1555 aa34.46■■■■□ 3.11
CCDC9-204ENST00000599398 LMTK2Q8IWU2 1503 aa34.45■■■■□ 3.1
CCDC9-204ENST00000599398 RRBP1Q9P2E9 1410 aaKnown RBP34.44■■■■□ 3.1
CCDC9-204ENST00000599398 THEMISQ8N1K5 641 aaPredicted RBP34.43■■■■□ 3.1
CCDC9-204ENST00000599398 CERKQ8TCT0 537 aa34.41■■■■□ 3.1
CCDC9-204ENST00000599398 FBXO41Q8TF61 875 aa34.39■■■■□ 3.1
CCDC9-204ENST00000599398 POLR1AO95602 1720 aaPredicted RBP34.38■■■■□ 3.09
CCDC9-204ENST00000599398 EFCAB6Q5THR3 1501 aa34.36■■■■□ 3.09
CCDC9-204ENST00000599398 UNC13BO14795 1591 aa34.34■■■■□ 3.09
CCDC9-204ENST00000599398 ANKLE2Q86XL3 938 aa34.34■■■■□ 3.09
CCDC9-204ENST00000599398 UBR1Q8IWV7 1749 aa34.3■■■■□ 3.08
CCDC9-204ENST00000599398 NEURL4Q96JN8 1562 aa34.29■■■■□ 3.08
CCDC9-204ENST00000599398 TET3O43151 1660 aa34.28■■■■□ 3.08
CCDC9-204ENST00000599398 ZNF335Q9H4Z2 1342 aaPredicted RBP34.26■■■■□ 3.07
CCDC9-204ENST00000599398 LTBP4Q8N2S1 1624 aa34.26■■■■□ 3.07
CCDC9-204ENST00000599398 STAG3Q9UJ98 1225 aa34.25■■■■□ 3.07
CCDC9-204ENST00000599398 PIK3C2BO00750 1634 aa34.25■■■■□ 3.07
CCDC9-204ENST00000599398 GCC2Q8IWJ2 1684 aa34.25■■■■□ 3.07
CCDC9-204ENST00000599398 SYNMO15061 1565 aa34.24■■■■□ 3.07
CCDC9-204ENST00000599398 RPRD2Q5VT52 1461 aaKnown RBP34.24■■■■□ 3.07
CCDC9-204ENST00000599398 NOS1P29475 1434 aa34.23■■■■□ 3.07
CCDC9-204ENST00000599398 NUP155O75694 1391 aa34.23■■■■□ 3.07
CCDC9-204ENST00000599398 IDI1Q13907 227 aa34.21■■■■□ 3.07
CCDC9-204ENST00000599398 IQGAP3Q86VI3 1631 aa34.21■■■■□ 3.07
CCDC9-204ENST00000599398 NPHP4O75161 1426 aaPredicted RBP34.21■■■■□ 3.07
CCDC9-204ENST00000599398 MED14O60244 1454 aa34.17■■■■□ 3.06
CCDC9-204ENST00000599398 IQGAP1P46940 1657 aa34.15■■■■□ 3.06
CCDC9-204ENST00000599398 SLC52A1Q9NWF4 448 aa34.15■■■■□ 3.06
CCDC9-204ENST00000599398 E9PCH4 1651 aa34.15■■■■□ 3.06
CCDC9-204ENST00000599398 SLIT1O75093 1534 aa34.14■■■■□ 3.06
CCDC9-204ENST00000599398 NAIPQ13075 1403 aa34.13■■■■□ 3.05
CCDC9-204ENST00000599398 TXNDC2Q86VQ3 553 aa34.13■■■■□ 3.05
CCDC9-204ENST00000599398 SCAF11Q99590 1463 aaKnown RBP34.13■■■■□ 3.05
CCDC9-204ENST00000599398 ARHGAP23Q9P227 1491 aa34.13■■■■□ 3.05
CCDC9-204ENST00000599398 KDM5AP29375 1690 aaKnown RBP34.12■■■■□ 3.05
CCDC9-204ENST00000599398 EID1Q9Y6B2 187 aa34.12■■■■□ 3.05
CCDC9-204ENST00000599398 TMEM2Q9UHN6 1383 aa34.1■■■■□ 3.05
CCDC9-204ENST00000599398 ADGRB3O60242 1522 aa34.09■■■■□ 3.05
CCDC9-204ENST00000599398 LTKP29376 864 aa34.09■■■■□ 3.05
CCDC9-204ENST00000599398 HFM1A2PYH4 1435 aa34.06■■■■□ 3.04
CCDC9-204ENST00000599398 IQSEC2Q5JU85 1478 aa34.06■■■■□ 3.04
CCDC9-204ENST00000599398 MYO5BQ9ULV0 1848 aa34■■■■□ 3.03
CCDC9-204ENST00000599398 CHGAP10645 457 aaKnown RBP34■■■■□ 3.03
CCDC9-204ENST00000599398 TRIM52Q96A61 297 aa33.99■■■■□ 3.03
CCDC9-204ENST00000599398 CPS1P31327 1500 aa33.99■■■■□ 3.03
CCDC9-204ENST00000599398 TMEM131LA2VDJ0 1609 aa33.95■■■■□ 3.03
CCDC9-204ENST00000599398 SPHKAPQ2M3C7 1700 aa33.93■■■■□ 3.02
CCDC9-204ENST00000599398 UBAP1LF5GYI3 381 aa33.89■■■■□ 3.02
CCDC9-204ENST00000599398 BCANQ96GW7 911 aa33.89■■■■□ 3.02
CCDC9-204ENST00000599398 STRCP1A6NGW2 1772 aa33.89■■■■□ 3.02
CCDC9-204ENST00000599398 RIMS2Q9UQ26 1411 aa33.88■■■■□ 3.01
CCDC9-204ENST00000599398 PPP1R15AO75807 674 aaPredicted RBP33.87■■■■□ 3.01
CCDC9-204ENST00000599398 HDGFP51858 240 aaKnown RBP33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms