RNA–Protein interactions for RNA: ENST00000598758.5

TGFB1-203, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-203ENST00000598758 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
TGFB1-203ENST00000598758 PIP4K2BP78356 416 aa15.38■□□□□ 0.05
TGFB1-203ENST00000598758 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
TGFB1-203ENST00000598758 MBD5Q9P267 1494 aa15.37■□□□□ 0.05
TGFB1-203ENST00000598758 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
TGFB1-203ENST00000598758 ZNF644Q9H582 1327 aaPredicted RBP15.36■□□□□ 0.05
TGFB1-203ENST00000598758 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
TGFB1-203ENST00000598758 PZPP20742 1482 aa15.35■□□□□ 0.05
TGFB1-203ENST00000598758 TNRQ92752 1358 aa15.35■□□□□ 0.05
TGFB1-203ENST00000598758 KDM5DQ9BY66 1539 aa15.34■□□□□ 0.05
TGFB1-203ENST00000598758 FOXD1Q16676 465 aa15.34■□□□□ 0.05
TGFB1-203ENST00000598758 FBXO31Q5XUX0 539 aaPredicted RBP15.34■□□□□ 0.05
TGFB1-203ENST00000598758 DEPDC5O75140 1603 aa15.34■□□□□ 0.05
TGFB1-203ENST00000598758 IQGAP1P46940 1657 aa15.34■□□□□ 0.05
TGFB1-203ENST00000598758 FAM135AQ9P2D6 1515 aa15.32■□□□□ 0.04
TGFB1-203ENST00000598758 TOM1O60784 492 aa15.31■□□□□ 0.04
TGFB1-203ENST00000598758 DHX29Q7Z478 1369 aaKnown RBP15.31■□□□□ 0.04
TGFB1-203ENST00000598758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.31■□□□□ 0.04
TGFB1-203ENST00000598758 RTEL1-TNFRSF6BF6WH68 1400 aa15.31■□□□□ 0.04
TGFB1-203ENST00000598758 MED14O60244 1454 aa15.31■□□□□ 0.04
TGFB1-203ENST00000598758 EHBP1L1Q8N3D4 1523 aa15.3■□□□□ 0.04
TGFB1-203ENST00000598758 RNF17Q9BXT8 1623 aaKnown RBP15.3■□□□□ 0.04
TGFB1-203ENST00000598758 ZC3H13Q5T200 1668 aaKnown RBP15.29■□□□□ 0.04
TGFB1-203ENST00000598758 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
TGFB1-203ENST00000598758 XIRP1Q702N8 1843 aaKnown RBP15.29■□□□□ 0.04
TGFB1-203ENST00000598758 SYNMO15061 1565 aa15.28■□□□□ 0.04
TGFB1-203ENST00000598758 NPHP4O75161 1426 aaPredicted RBP15.28■□□□□ 0.04
TGFB1-203ENST00000598758 MTUS2Q5JR59 1369 aa15.28■□□□□ 0.04
TGFB1-203ENST00000598758 NLRP1Q9C000 1473 aa15.27■□□□□ 0.04
TGFB1-203ENST00000598758 CFAP65Q6ZU64 1925 aaKnown RBP15.27■□□□□ 0.03
TGFB1-203ENST00000598758 LRRC7Q96NW7 1537 aa15.27■□□□□ 0.03
TGFB1-203ENST00000598758 KIF3BO15066 747 aa15.26■□□□□ 0.03
TGFB1-203ENST00000598758 CCDC141Q6ZP82 1450 aa15.26■□□□□ 0.03
TGFB1-203ENST00000598758 MIA2Q96PC5 1412 aa15.26■□□□□ 0.03
TGFB1-203ENST00000598758 CAMSAP2Q08AD1 1489 aa15.25■□□□□ 0.03
TGFB1-203ENST00000598758 ANKLE2Q86XL3 938 aa15.24■□□□□ 0.03
TGFB1-203ENST00000598758 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
TGFB1-203ENST00000598758 CEP152O94986 1710 aa15.23■□□□□ 0.03
TGFB1-203ENST00000598758 UBR1Q8IWV7 1749 aa15.23■□□□□ 0.03
TGFB1-203ENST00000598758 MROH1Q8NDA8 1641 aa15.22■□□□□ 0.03
TGFB1-203ENST00000598758 ABCC3O15438 1527 aa15.22■□□□□ 0.03
TGFB1-203ENST00000598758 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
TGFB1-203ENST00000598758 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
TGFB1-203ENST00000598758 THEMISQ8N1K5 641 aaPredicted RBP15.2■□□□□ 0.02
TGFB1-203ENST00000598758 NCOA2Q15596 1464 aa15.2■□□□□ 0.02
TGFB1-203ENST00000598758 RGS17Q9UGC6 210 aaPredicted RBP15.19■□□□□ 0.02
TGFB1-203ENST00000598758 ERVK-7P63135 1459 aa15.19■□□□□ 0.02
TGFB1-203ENST00000598758 EIF2AK4Q9P2K8 1649 aaKnown RBP15.17■□□□□ 0.02
TGFB1-203ENST00000598758 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
TGFB1-203ENST00000598758 SETD1AO15047 1707 aaKnown RBP15.14■□□□□ 0.01
TGFB1-203ENST00000598758 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
TGFB1-203ENST00000598758 ARHGAP23Q9P227 1491 aa15.13■□□□□ 0.01
TGFB1-203ENST00000598758 SLIT1O75093 1534 aa15.12■□□□□ 0.01
TGFB1-203ENST00000598758 PIK3C2BO00750 1634 aa15.1■□□□□ 0.01
TGFB1-203ENST00000598758 ROBO1Q9Y6N7 1651 aa15.09■□□□□ 0.01
TGFB1-203ENST00000598758 LTKP29376 864 aa15.09■□□□□ 0.01
TGFB1-203ENST00000598758 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
TGFB1-203ENST00000598758 MAP3K1Q13233 1512 aa15.07■□□□□ 0
TGFB1-203ENST00000598758 POTEAQ6S8J7 498 aa15.07■□□□□ 0
TGFB1-203ENST00000598758 PRDM15P57071 1507 aaPredicted RBP15.07■□□□□ 0
TGFB1-203ENST00000598758 ADRA2BP18089 450 aa15.06■□□□□ 0
TGFB1-203ENST00000598758 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
TGFB1-203ENST00000598758 FAM135BQ49AJ0 1406 aa15.05■□□□□ -0
TGFB1-203ENST00000598758 TSPY4P0CV99 314 aa15.04■□□□□ -0
TGFB1-203ENST00000598758 TSPY10P0CW01 314 aa15.04■□□□□ -0
TGFB1-203ENST00000598758 KDM5AP29375 1690 aaKnown RBP15.03■□□□□ -0
TGFB1-203ENST00000598758 DUOX2Q9NRD8 1548 aa15.03■□□□□ -0
TGFB1-203ENST00000598758 TXNDC2Q86VQ3 553 aa15.03■□□□□ -0
TGFB1-203ENST00000598758 NWD1Q149M9 1564 aa15.02□□□□□ -0.01
TGFB1-203ENST00000598758 LRRC9Q6ZRR7 1453 aa15.01□□□□□ -0.01
TGFB1-203ENST00000598758 ARHGAP31Q2M1Z3 1444 aa15.01□□□□□ -0.01
TGFB1-203ENST00000598758 TMEM94Q12767 1356 aa15.01□□□□□ -0.01
TGFB1-203ENST00000598758 PHLPP1O60346 1717 aa15.01□□□□□ -0.01
TGFB1-203ENST00000598758 TET3O43151 1660 aa15.01□□□□□ -0.01
TGFB1-203ENST00000598758 TMEM2Q9UHN6 1383 aa14.99□□□□□ -0.01
TGFB1-203ENST00000598758 MYO5BQ9ULV0 1848 aa14.99□□□□□ -0.01
TGFB1-203ENST00000598758 EFCAB6Q5THR3 1501 aa14.98□□□□□ -0.01
TGFB1-203ENST00000598758 RBM33Q96EV2 1170 aaKnown RBP14.97□□□□□ -0.01
TGFB1-203ENST00000598758 COL16A1Q07092 1604 aaPredicted RBP14.96□□□□□ -0.01
TGFB1-203ENST00000598758 CHD2O14647 1828 aaKnown RBP14.96□□□□□ -0.01
TGFB1-203ENST00000598758 MYOM3Q5VTT5 1437 aa14.95□□□□□ -0.02
TGFB1-203ENST00000598758 ERBINQ96RT1 1412 aa14.95□□□□□ -0.02
TGFB1-203ENST00000598758 ADGRB3O60242 1522 aa14.95□□□□□ -0.02
TGFB1-203ENST00000598758 KIF15Q9NS87 1388 aa14.95□□□□□ -0.02
TGFB1-203ENST00000598758 NKTRP30414 1462 aaKnown RBP14.95□□□□□ -0.02
TGFB1-203ENST00000598758 EID1Q9Y6B2 187 aa14.94□□□□□ -0.02
TGFB1-203ENST00000598758 LMTK2Q8IWU2 1503 aa14.93□□□□□ -0.02
TGFB1-203ENST00000598758 KCNA6P17658 529 aa14.93□□□□□ -0.02
TGFB1-203ENST00000598758 ABCC5O15440 1437 aa14.92□□□□□ -0.02
TGFB1-203ENST00000598758 LRP6O75581 1613 aa14.92□□□□□ -0.02
TGFB1-203ENST00000598758 KANK4Q5T7N3 995 aaPredicted RBP14.92□□□□□ -0.02
TGFB1-203ENST00000598758 SLC26A8Q96RN1 970 aa14.92□□□□□ -0.02
TGFB1-203ENST00000598758 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
TGFB1-203ENST00000598758 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
TGFB1-203ENST00000598758 GCC2Q8IWJ2 1684 aa14.91□□□□□ -0.02
TGFB1-203ENST00000598758 PROSER2Q86WR7 435 aaPredicted RBP14.91□□□□□ -0.02
TGFB1-203ENST00000598758 IDI1Q13907 227 aa14.9□□□□□ -0.02
TGFB1-203ENST00000598758 NOS1P29475 1434 aa14.9□□□□□ -0.02
TGFB1-203ENST00000598758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
TGFB1-203ENST00000598758 SRCAPQ6ZRS2 3230 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms