RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 C3P01024 1663 aa22.88■■□□□ 1.25
IRF3-211ENST00000596644 ITGAEP38570 1179 aa22.88■■□□□ 1.25
IRF3-211ENST00000596644 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
IRF3-211ENST00000596644 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
IRF3-211ENST00000596644 RNF17Q9BXT8 1623 aaKnown RBP22.87■■□□□ 1.25
IRF3-211ENST00000596644 CEBPAP49715 358 aaPredicted RBP22.87■■□□□ 1.25
IRF3-211ENST00000596644 PTPRKQ15262 1439 aa22.85■■□□□ 1.25
IRF3-211ENST00000596644 KDM5DQ9BY66 1539 aa22.84■■□□□ 1.25
IRF3-211ENST00000596644 FAM135AQ9P2D6 1515 aa22.84■■□□□ 1.25
IRF3-211ENST00000596644 ZMYM3Q14202 1370 aa22.81■■□□□ 1.24
IRF3-211ENST00000596644 WASHC2CQ9Y4E1 1318 aa22.81■■□□□ 1.24
IRF3-211ENST00000596644 ROCK1Q13464 1354 aa22.8■■□□□ 1.24
IRF3-211ENST00000596644 MROH1Q8NDA8 1641 aa22.79■■□□□ 1.24
IRF3-211ENST00000596644 ZC3H13Q5T200 1668 aaKnown RBP22.79■■□□□ 1.24
IRF3-211ENST00000596644 PREX1Q8TCU6 1659 aa22.77■■□□□ 1.24
IRF3-211ENST00000596644 ANKRD50Q9ULJ7 1429 aa22.77■■□□□ 1.24
IRF3-211ENST00000596644 DEPDC5O75140 1603 aa22.77■■□□□ 1.24
IRF3-211ENST00000596644 PRDM15P57071 1507 aaPredicted RBP22.77■■□□□ 1.24
IRF3-211ENST00000596644 ABCC3O15438 1527 aa22.76■■□□□ 1.23
IRF3-211ENST00000596644 CEP152O94986 1710 aa22.75■■□□□ 1.23
IRF3-211ENST00000596644 SETD1BQ9UPS6 1966 aaKnown RBP22.74■■□□□ 1.23
IRF3-211ENST00000596644 LMTK3Q96Q04 1460 aa22.74■■□□□ 1.23
IRF3-211ENST00000596644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.23
IRF3-211ENST00000596644 NPATQ14207 1427 aa22.74■■□□□ 1.23
IRF3-211ENST00000596644 KANK1Q14678 1352 aa22.73■■□□□ 1.23
IRF3-211ENST00000596644 UHRF1BP1Q6BDS2 1440 aa22.72■■□□□ 1.23
IRF3-211ENST00000596644 CAMSAP1Q5T5Y3 1602 aa22.71■■□□□ 1.23
IRF3-211ENST00000596644 PZPP20742 1482 aa22.7■■□□□ 1.22
IRF3-211ENST00000596644 MYO3AQ8NEV4 1616 aa22.65■■□□□ 1.22
IRF3-211ENST00000596644 UNC13BO14795 1591 aa22.65■■□□□ 1.22
IRF3-211ENST00000596644 VWDEQ8N2E2 1590 aa22.65■■□□□ 1.22
IRF3-211ENST00000596644 GCC2Q8IWJ2 1684 aa22.65■■□□□ 1.22
IRF3-211ENST00000596644 HSPA2P54652 639 aa22.63■■□□□ 1.21
IRF3-211ENST00000596644 FBXO31Q5XUX0 539 aaPredicted RBP22.63■■□□□ 1.21
IRF3-211ENST00000596644 LMTK2Q8IWU2 1503 aa22.62■■□□□ 1.21
IRF3-211ENST00000596644 TNRQ92752 1358 aa22.62■■□□□ 1.21
IRF3-211ENST00000596644 CFAP65Q6ZU64 1925 aaKnown RBP22.61■■□□□ 1.21
IRF3-211ENST00000596644 NAIPQ13075 1403 aa22.6■■□□□ 1.21
IRF3-211ENST00000596644 ARHGAP31Q2M1Z3 1444 aa22.6■■□□□ 1.21
IRF3-211ENST00000596644 ZNF142P52746 1687 aaPredicted RBP22.6■■□□□ 1.21
IRF3-211ENST00000596644 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
IRF3-211ENST00000596644 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
IRF3-211ENST00000596644 CEP170BQ9Y4F5 1589 aaPredicted RBP22.59■■□□□ 1.21
IRF3-211ENST00000596644 HFM1A2PYH4 1435 aa22.58■■□□□ 1.21
IRF3-211ENST00000596644 EFCAB6Q5THR3 1501 aa22.57■■□□□ 1.2
IRF3-211ENST00000596644 TET3O43151 1660 aa22.57■■□□□ 1.2
IRF3-211ENST00000596644 IQGAP3Q86VI3 1631 aa22.56■■□□□ 1.2
IRF3-211ENST00000596644 A2ML1A8K2U0 1454 aa22.54■■□□□ 1.2
IRF3-211ENST00000596644 NUP155O75694 1391 aa22.54■■□□□ 1.2
IRF3-211ENST00000596644 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
IRF3-211ENST00000596644 RPRD2Q5VT52 1461 aaKnown RBP22.49■■□□□ 1.19
IRF3-211ENST00000596644 E9PCH4 1651 aa22.47■■□□□ 1.19
IRF3-211ENST00000596644 STRCQ7RTU9 1775 aa22.47■■□□□ 1.19
IRF3-211ENST00000596644 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
IRF3-211ENST00000596644 TRIM52Q96A61 297 aa22.45■■□□□ 1.18
IRF3-211ENST00000596644 SYNMO15061 1565 aa22.45■■□□□ 1.18
IRF3-211ENST00000596644 NOS1P29475 1434 aa22.44■■□□□ 1.18
IRF3-211ENST00000596644 PLA2R1Q13018 1463 aa22.44■■□□□ 1.18
IRF3-211ENST00000596644 UBR1Q8IWV7 1749 aa22.41■■□□□ 1.18
IRF3-211ENST00000596644 THEMISQ8N1K5 641 aaPredicted RBP22.41■■□□□ 1.18
IRF3-211ENST00000596644 PIK3C2BO00750 1634 aa22.41■■□□□ 1.18
IRF3-211ENST00000596644 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
IRF3-211ENST00000596644 DMRT2Q9Y5R5 561 aa22.4■■□□□ 1.18
IRF3-211ENST00000596644 STAG3Q9UJ98 1225 aa22.38■■□□□ 1.17
IRF3-211ENST00000596644 POLR1AO95602 1720 aaPredicted RBP22.37■■□□□ 1.17
IRF3-211ENST00000596644 NCKAP5LQ9HCH0 1330 aa22.37■■□□□ 1.17
IRF3-211ENST00000596644 PKD2Q13563 968 aa22.37■■□□□ 1.17
IRF3-211ENST00000596644 IDI1Q13907 227 aa22.36■■□□□ 1.17
IRF3-211ENST00000596644 SLC52A1Q9NWF4 448 aa22.36■■□□□ 1.17
IRF3-211ENST00000596644 SPHKAPQ2M3C7 1700 aa22.35■■□□□ 1.17
IRF3-211ENST00000596644 KDM5AP29375 1690 aaKnown RBP22.35■■□□□ 1.17
IRF3-211ENST00000596644 PTPRTO14522 1441 aa22.34■■□□□ 1.17
IRF3-211ENST00000596644 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
IRF3-211ENST00000596644 ADGRB3O60242 1522 aa22.33■■□□□ 1.17
IRF3-211ENST00000596644 ACIN1Q9UKV3 1341 aaKnown RBP22.32■■□□□ 1.16
IRF3-211ENST00000596644 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
IRF3-211ENST00000596644 RAB3GAP2Q9H2M9 1393 aa22.32■■□□□ 1.16
IRF3-211ENST00000596644 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
IRF3-211ENST00000596644 SLIT1O75093 1534 aa22.28■■□□□ 1.16
IRF3-211ENST00000596644 MYO5BQ9ULV0 1848 aa22.27■■□□□ 1.16
IRF3-211ENST00000596644 CHGAP10645 457 aaKnown RBP22.27■■□□□ 1.16
IRF3-211ENST00000596644 ARHGAP23Q9P227 1491 aa22.27■■□□□ 1.16
IRF3-211ENST00000596644 TRPM2O94759 1503 aa22.26■■□□□ 1.15
IRF3-211ENST00000596644 TMEM2Q9UHN6 1383 aa22.26■■□□□ 1.15
IRF3-211ENST00000596644 TMEM131LA2VDJ0 1609 aa22.26■■□□□ 1.15
IRF3-211ENST00000596644 MPHOSPH9Q99550 1183 aa22.25■■□□□ 1.15
IRF3-211ENST00000596644 EID1Q9Y6B2 187 aa22.25■■□□□ 1.15
IRF3-211ENST00000596644 SCAF11Q99590 1463 aaKnown RBP22.25■■□□□ 1.15
IRF3-211ENST00000596644 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
IRF3-211ENST00000596644 IQGAP1P46940 1657 aa22.23■■□□□ 1.15
IRF3-211ENST00000596644 MED14O60244 1454 aa22.23■■□□□ 1.15
IRF3-211ENST00000596644 TXNDC2Q86VQ3 553 aa22.23■■□□□ 1.15
IRF3-211ENST00000596644 CLTCL1P53675 1640 aa22.22■■□□□ 1.15
IRF3-211ENST00000596644 LTKP29376 864 aa22.2■■□□□ 1.14
IRF3-211ENST00000596644 FOXD1Q16676 465 aa22.2■■□□□ 1.14
IRF3-211ENST00000596644 KIF1BO60333 1816 aa22.19■■□□□ 1.14
IRF3-211ENST00000596644 HRCP23327 699 aa22.18■■□□□ 1.14
IRF3-211ENST00000596644 RIMS2Q9UQ26 1411 aa22.17■■□□□ 1.14
IRF3-211ENST00000596644 HDGFP51858 240 aaKnown RBP22.16■■□□□ 1.14
IRF3-211ENST00000596644 ZFYVE9O95405 1425 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms