RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 KIF15Q9NS87 1388 aa29.6■■■□□ 2.33
HOMER3-209ENST00000596482 RNF17Q9BXT8 1623 aaKnown RBP29.59■■■□□ 2.33
HOMER3-209ENST00000596482 NPATQ14207 1427 aa29.58■■■□□ 2.33
HOMER3-209ENST00000596482 ERBINQ96RT1 1412 aa29.54■■■□□ 2.32
HOMER3-209ENST00000596482 ANKRD30AQ9BXX3 1397 aa29.54■■■□□ 2.32
HOMER3-209ENST00000596482 PPARGC1BQ86YN6 1023 aaKnown RBP29.53■■■□□ 2.32
HOMER3-209ENST00000596482 HSPA2P54652 639 aa29.52■■■□□ 2.32
HOMER3-209ENST00000596482 RRP7BPQ9NSQ0 103 aa29.51■■■□□ 2.31
HOMER3-209ENST00000596482 SETD1BQ9UPS6 1966 aaKnown RBP29.51■■■□□ 2.31
HOMER3-209ENST00000596482 ZC3H13Q5T200 1668 aaKnown RBP29.5■■■□□ 2.31
HOMER3-209ENST00000596482 ADGRL2O95490 1459 aa29.5■■■□□ 2.31
HOMER3-209ENST00000596482 CHIC2Q9UKJ5 165 aa29.5■■■□□ 2.31
HOMER3-209ENST00000596482 WASHC2CQ9Y4E1 1318 aa29.49■■■□□ 2.31
HOMER3-209ENST00000596482 PTPRKQ15262 1439 aa29.49■■■□□ 2.31
HOMER3-209ENST00000596482 MROH1Q8NDA8 1641 aa29.47■■■□□ 2.31
HOMER3-209ENST00000596482 MYO3AQ8NEV4 1616 aa29.46■■■□□ 2.31
HOMER3-209ENST00000596482 NCOA1Q15788 1441 aa29.45■■■□□ 2.31
HOMER3-209ENST00000596482 ABCC3O15438 1527 aa29.45■■■□□ 2.31
HOMER3-209ENST00000596482 PZPP20742 1482 aa29.45■■■□□ 2.31
HOMER3-209ENST00000596482 PRDM15P57071 1507 aaPredicted RBP29.45■■■□□ 2.3
HOMER3-209ENST00000596482 ZNF142P52746 1687 aaPredicted RBP29.4■■■□□ 2.3
HOMER3-209ENST00000596482 DEPDC5O75140 1603 aa29.4■■■□□ 2.3
HOMER3-209ENST00000596482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.39■■■□□ 2.3
HOMER3-209ENST00000596482 CEP152O94986 1710 aa29.39■■■□□ 2.3
HOMER3-209ENST00000596482 CEP170BQ9Y4F5 1589 aaPredicted RBP29.37■■■□□ 2.29
HOMER3-209ENST00000596482 CAMSAP1Q5T5Y3 1602 aa29.37■■■□□ 2.29
HOMER3-209ENST00000596482 KANK1Q14678 1352 aa29.35■■■□□ 2.29
HOMER3-209ENST00000596482 TNRQ92752 1358 aa29.35■■■□□ 2.29
HOMER3-209ENST00000596482 RRBP1Q9P2E9 1410 aaKnown RBP29.33■■■□□ 2.29
HOMER3-209ENST00000596482 ANKRD50Q9ULJ7 1429 aa29.33■■■□□ 2.29
HOMER3-209ENST00000596482 ROCK1Q13464 1354 aa29.32■■■□□ 2.28
HOMER3-209ENST00000596482 FBXO31Q5XUX0 539 aaPredicted RBP29.3■■■□□ 2.28
HOMER3-209ENST00000596482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.3■■■□□ 2.28
HOMER3-209ENST00000596482 A2ML1A8K2U0 1454 aa29.29■■■□□ 2.28
HOMER3-209ENST00000596482 ITGAEP38570 1179 aa29.29■■■□□ 2.28
HOMER3-209ENST00000596482 STRCQ7RTU9 1775 aa29.28■■■□□ 2.28
HOMER3-209ENST00000596482 SPATA31D1Q6ZQQ2 1576 aa29.27■■■□□ 2.28
HOMER3-209ENST00000596482 ERVK-7P63135 1459 aa29.27■■■□□ 2.28
HOMER3-209ENST00000596482 NLRP1Q9C000 1473 aa29.25■■■□□ 2.27
HOMER3-209ENST00000596482 VWDEQ8N2E2 1590 aa29.25■■■□□ 2.27
HOMER3-209ENST00000596482 LMTK2Q8IWU2 1503 aa29.25■■■□□ 2.27
HOMER3-209ENST00000596482 ARHGAP31Q2M1Z3 1444 aa29.24■■■□□ 2.27
HOMER3-209ENST00000596482 PLA2R1Q13018 1463 aa29.23■■■□□ 2.27
HOMER3-209ENST00000596482 DMRT2Q9Y5R5 561 aa29.23■■■□□ 2.27
HOMER3-209ENST00000596482 UNC13BO14795 1591 aa29.19■■■□□ 2.26
HOMER3-209ENST00000596482 EFCAB6Q5THR3 1501 aa29.18■■■□□ 2.26
HOMER3-209ENST00000596482 PTPRTO14522 1441 aa29.17■■■□□ 2.26
HOMER3-209ENST00000596482 UGGT1Q9NYU2 1555 aa29.16■■■□□ 2.26
HOMER3-209ENST00000596482 PKD2Q13563 968 aa29.11■■■□□ 2.25
HOMER3-209ENST00000596482 TET3O43151 1660 aa29.11■■■□□ 2.25
HOMER3-209ENST00000596482 NCKAP5LQ9HCH0 1330 aa29.09■■■□□ 2.25
HOMER3-209ENST00000596482 CFAP65Q6ZU64 1925 aaKnown RBP29.08■■■□□ 2.25
HOMER3-209ENST00000596482 POLR1AO95602 1720 aaPredicted RBP29.08■■■□□ 2.25
HOMER3-209ENST00000596482 RPRD2Q5VT52 1461 aaKnown RBP29.07■■■□□ 2.24
HOMER3-209ENST00000596482 IQGAP3Q86VI3 1631 aa29.07■■■□□ 2.24
HOMER3-209ENST00000596482 GCC2Q8IWJ2 1684 aa29.07■■■□□ 2.24
HOMER3-209ENST00000596482 THEMISQ8N1K5 641 aaPredicted RBP29.07■■■□□ 2.24
HOMER3-209ENST00000596482 UBR1Q8IWV7 1749 aa29.03■■■□□ 2.24
HOMER3-209ENST00000596482 SYNMO15061 1565 aa29.02■■■□□ 2.24
HOMER3-209ENST00000596482 NOS1P29475 1434 aa29.02■■■□□ 2.24
HOMER3-209ENST00000596482 NUP155O75694 1391 aa29.01■■■□□ 2.23
HOMER3-209ENST00000596482 PIK3C2BO00750 1634 aa29■■■□□ 2.23
HOMER3-209ENST00000596482 NAIPQ13075 1403 aa29■■■□□ 2.23
HOMER3-209ENST00000596482 NEURL4Q96JN8 1562 aa29■■■□□ 2.23
HOMER3-209ENST00000596482 HFM1A2PYH4 1435 aa28.98■■■□□ 2.23
HOMER3-209ENST00000596482 ANKLE2Q86XL3 938 aa28.98■■■□□ 2.23
HOMER3-209ENST00000596482 E9PCH4 1651 aa28.96■■■□□ 2.23
HOMER3-209ENST00000596482 KDM5AP29375 1690 aaKnown RBP28.95■■■□□ 2.22
HOMER3-209ENST00000596482 STAG3Q9UJ98 1225 aa28.94■■■□□ 2.22
HOMER3-209ENST00000596482 ADGRB3O60242 1522 aa28.93■■■□□ 2.22
HOMER3-209ENST00000596482 CERKQ8TCT0 537 aa28.92■■■□□ 2.22
HOMER3-209ENST00000596482 SLIT1O75093 1534 aa28.91■■■□□ 2.22
HOMER3-209ENST00000596482 NPHP4O75161 1426 aaPredicted RBP28.91■■■□□ 2.22
HOMER3-209ENST00000596482 MED14O60244 1454 aa28.91■■■□□ 2.22
HOMER3-209ENST00000596482 ILDR1Q86SU0 546 aaPredicted RBP28.9■■■□□ 2.22
HOMER3-209ENST00000596482 SLC52A1Q9NWF4 448 aa28.9■■■□□ 2.22
HOMER3-209ENST00000596482 ARHGAP23Q9P227 1491 aa28.9■■■□□ 2.22
HOMER3-209ENST00000596482 IQGAP1P46940 1657 aa28.89■■■□□ 2.22
HOMER3-209ENST00000596482 LTBP4Q8N2S1 1624 aa28.89■■■□□ 2.22
HOMER3-209ENST00000596482 SCAF11Q99590 1463 aaKnown RBP28.89■■■□□ 2.22
HOMER3-209ENST00000596482 IDI1Q13907 227 aa28.88■■■□□ 2.21
HOMER3-209ENST00000596482 FBXO41Q8TF61 875 aa28.87■■■□□ 2.21
HOMER3-209ENST00000596482 ZNF335Q9H4Z2 1342 aaPredicted RBP28.85■■■□□ 2.21
HOMER3-209ENST00000596482 TMEM2Q9UHN6 1383 aa28.85■■■□□ 2.21
HOMER3-209ENST00000596482 EID1Q9Y6B2 187 aa28.83■■■□□ 2.21
HOMER3-209ENST00000596482 TXNDC2Q86VQ3 553 aa28.8■■■□□ 2.2
HOMER3-209ENST00000596482 SPHKAPQ2M3C7 1700 aa28.8■■■□□ 2.2
HOMER3-209ENST00000596482 TRIM52Q96A61 297 aa28.79■■■□□ 2.2
HOMER3-209ENST00000596482 IQSEC2Q5JU85 1478 aa28.78■■■□□ 2.2
HOMER3-209ENST00000596482 TMEM131LA2VDJ0 1609 aa28.76■■■□□ 2.2
HOMER3-209ENST00000596482 LTKP29376 864 aa28.76■■■□□ 2.19
HOMER3-209ENST00000596482 CPS1P31327 1500 aa28.74■■■□□ 2.19
HOMER3-209ENST00000596482 MYO5BQ9ULV0 1848 aa28.73■■■□□ 2.19
HOMER3-209ENST00000596482 CHGAP10645 457 aaKnown RBP28.72■■■□□ 2.19
HOMER3-209ENST00000596482 TRPM2O94759 1503 aa28.7■■■□□ 2.19
HOMER3-209ENST00000596482 RIMS2Q9UQ26 1411 aa28.69■■■□□ 2.18
HOMER3-209ENST00000596482 ZFYVE9O95405 1425 aa28.68■■■□□ 2.18
HOMER3-209ENST00000596482 SLC4A1APQ9BWU0 796 aaKnown RBP28.67■■■□□ 2.18
HOMER3-209ENST00000596482 PPP1R15AO75807 674 aaPredicted RBP28.65■■■□□ 2.18
HOMER3-209ENST00000596482 HDGFP51858 240 aaKnown RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms