RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 NISCHQ9Y2I1 1504 aa46.89■■■■■ 5.1
HOMER3-209ENST00000596482 CCDC180Q9P1Z9 1646 aa41.84■■■■■ 4.29
HOMER3-209ENST00000596482 ABCC9O60706 1549 aa41.05■■■■■ 4.16
HOMER3-209ENST00000596482 RB1CC1Q8TDY2 1594 aa39.46■■■■□ 3.91
HOMER3-209ENST00000596482 NACADO15069 1562 aa39.35■■■■□ 3.89
HOMER3-209ENST00000596482 DCAF8L2P0C7V8 631 aa39.2■■■■□ 3.87
HOMER3-209ENST00000596482 ZCCHC6Q5VYS8 1495 aaKnown RBP39.06■■■■□ 3.84
HOMER3-209ENST00000596482 MYO15BQ96JP2 1530 aa39.04■■■■□ 3.84
HOMER3-209ENST00000596482 DCAF1Q9Y4B6 1507 aa38.81■■■■□ 3.8
HOMER3-209ENST00000596482 UNC13AQ9UPW8 1703 aa38.5■■■■□ 3.75
HOMER3-209ENST00000596482 PABPN1Q86U42 306 aaKnown RBP eCLIP38.27■■■■□ 3.72
HOMER3-209ENST00000596482 BICRAQ9NZM4 1560 aa38.2■■■■□ 3.71
HOMER3-209ENST00000596482 SCRIBQ14160 1630 aa38.16■■■■□ 3.7
HOMER3-209ENST00000596482 SHROOM4Q9ULL8 1493 aa37.9■■■■□ 3.66
HOMER3-209ENST00000596482 DNAJC5BQ9UF47 199 aa37.69■■■■□ 3.62
HOMER3-209ENST00000596482 EIF4G1Q04637 1599 aaKnown RBP37.25■■■■□ 3.55
HOMER3-209ENST00000596482 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
HOMER3-209ENST00000596482 CECR2Q9BXF3 1484 aa36.92■■■■□ 3.5
HOMER3-209ENST00000596482 SMARCA4P51532 1647 aa36.46■■■■□ 3.43
HOMER3-209ENST00000596482 BAZ1AQ9NRL2 1556 aaPredicted RBP36.4■■■■□ 3.42
HOMER3-209ENST00000596482 SMARCA2P51531 1590 aa36.27■■■■□ 3.4
HOMER3-209ENST00000596482 ATAD2BQ9ULI0 1458 aa36.27■■■■□ 3.4
HOMER3-209ENST00000596482 NCAPD3P42695 1498 aa36.26■■■■□ 3.4
HOMER3-209ENST00000596482 HMGXB3Q12766 1538 aa36.14■■■■□ 3.38
HOMER3-209ENST00000596482 MROH2BQ7Z745 1585 aa36.12■■■■□ 3.37
HOMER3-209ENST00000596482 PEG3Q9GZU2 1588 aa36.09■■■■□ 3.37
HOMER3-209ENST00000596482 BAZ1BQ9UIG0 1483 aaKnown RBP36.02■■■■□ 3.36
HOMER3-209ENST00000596482 WIZO95785 1651 aa35.73■■■■□ 3.31
HOMER3-209ENST00000596482 RSF1Q96T23 1441 aaPredicted RBP35.63■■■■□ 3.29
HOMER3-209ENST00000596482 ERCC6Q03468 1493 aa35.47■■■■□ 3.27
HOMER3-209ENST00000596482 NESP48681 1621 aa35.44■■■■□ 3.26
HOMER3-209ENST00000596482 LAMC3Q9Y6N6 1575 aa35.4■■■■□ 3.26
HOMER3-209ENST00000596482 TOP2AP11388 1531 aaKnown RBP35.4■■■■□ 3.26
HOMER3-209ENST00000596482 CADPSQ9ULU8 1353 aa35.2■■■■□ 3.23
HOMER3-209ENST00000596482 PDS5BQ9NTI5 1447 aa35.15■■■■□ 3.22
HOMER3-209ENST00000596482 CUX2O14529 1486 aa35.14■■■■□ 3.22
HOMER3-209ENST00000596482 KIF21AQ7Z4S6 1674 aa35.08■■■■□ 3.21
HOMER3-209ENST00000596482 THOC2Q8NI27 1593 aaKnown RBP35.02■■■■□ 3.2
HOMER3-209ENST00000596482 CFTRP13569 1480 aa34.97■■■■□ 3.19
HOMER3-209ENST00000596482 CCDC88BA6NC98 1476 aa34.91■■■■□ 3.18
HOMER3-209ENST00000596482 CEP164Q9UPV0 1460 aa34.84■■■■□ 3.17
HOMER3-209ENST00000596482 FANCD2Q9BXW9 1451 aa34.84■■■■□ 3.17
HOMER3-209ENST00000596482 MRC2Q9UBG0 1479 aa34.82■■■■□ 3.16
HOMER3-209ENST00000596482 PRDM2Q13029 1718 aa34.75■■■■□ 3.15
HOMER3-209ENST00000596482 WDR62O43379 1518 aa34.71■■■■□ 3.15
HOMER3-209ENST00000596482 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
HOMER3-209ENST00000596482 URB2Q14146 1524 aaKnown RBP34.48■■■■□ 3.11
HOMER3-209ENST00000596482 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
HOMER3-209ENST00000596482 ABCC8Q09428 1581 aa34.25■■■■□ 3.07
HOMER3-209ENST00000596482 DNMBPQ6XZF7 1577 aa34.23■■■■□ 3.07
HOMER3-209ENST00000596482 DNAJC5Q9H3Z4 198 aa34.13■■■■□ 3.05
HOMER3-209ENST00000596482 IFT140Q96RY7 1462 aa34.1■■■■□ 3.05
HOMER3-209ENST00000596482 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.02
HOMER3-209ENST00000596482 CUX1P39880 1505 aa33.92■■■■□ 3.02
HOMER3-209ENST00000596482 ZNF608Q9ULD9 1512 aaPredicted RBP33.92■■■■□ 3.02
HOMER3-209ENST00000596482 TARBP1Q13395 1621 aaKnown RBP33.88■■■■□ 3.01
HOMER3-209ENST00000596482 EIF4G3O43432 1585 aaKnown RBP33.85■■■■□ 3.01
HOMER3-209ENST00000596482 FGD5Q6ZNL6 1462 aa33.85■■■■□ 3.01
HOMER3-209ENST00000596482 SOGA1O94964 1423 aa33.78■■■■□ 3
HOMER3-209ENST00000596482 RAD54L2Q9Y4B4 1467 aa33.77■■■■□ 3
HOMER3-209ENST00000596482 AQRO60306 1485 aaKnown RBP eCLIP33.69■■■□□ 2.98
HOMER3-209ENST00000596482 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
HOMER3-209ENST00000596482 WRNQ14191 1432 aaPredicted RBP eCLIP33.65■■■□□ 2.98
HOMER3-209ENST00000596482 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
HOMER3-209ENST00000596482 TOP2BQ02880 1626 aa33.61■■■□□ 2.97
HOMER3-209ENST00000596482 TDRD9Q8NDG6 1382 aaKnown RBP33.6■■■□□ 2.97
HOMER3-209ENST00000596482 SYNJ1O43426 1573 aa33.58■■■□□ 2.97
HOMER3-209ENST00000596482 OSCARQ8IYS5 282 aa33.56■■■□□ 2.96
HOMER3-209ENST00000596482 ABCA10Q8WWZ4 1543 aa33.51■■■□□ 2.95
HOMER3-209ENST00000596482 GRIN2BQ13224 1484 aa33.45■■■□□ 2.95
HOMER3-209ENST00000596482 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
HOMER3-209ENST00000596482 CHD1O14646 1710 aa33.43■■■□□ 2.94
HOMER3-209ENST00000596482 GAPVD1Q14C86 1478 aa33.42■■■□□ 2.94
HOMER3-209ENST00000596482 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
HOMER3-209ENST00000596482 PBRM1Q86U86 1689 aa33.4■■■□□ 2.94
HOMER3-209ENST00000596482 MAGI1Q96QZ7 1491 aaPredicted RBP33.4■■■□□ 2.94
HOMER3-209ENST00000596482 FBLN2P98095 1184 aa33.34■■■□□ 2.93
HOMER3-209ENST00000596482 SYNJ2O15056 1496 aa33.25■■■□□ 2.91
HOMER3-209ENST00000596482 CHMP7Q8WUX9 453 aaPredicted RBP33.22■■■□□ 2.91
HOMER3-209ENST00000596482 ADAMTS12P58397 1594 aa33.13■■■□□ 2.89
HOMER3-209ENST00000596482 ERICH3Q5RHP9 1530 aa33.12■■■□□ 2.89
HOMER3-209ENST00000596482 RIMBP3CA6NJZ7 1639 aa33.11■■■□□ 2.89
HOMER3-209ENST00000596482 RIMBP3BA6NNM3 1639 aa33.11■■■□□ 2.89
HOMER3-209ENST00000596482 RIMBP3Q9UFD9 1639 aa33.11■■■□□ 2.89
HOMER3-209ENST00000596482 ARHGEF11O15085 1522 aa33.08■■■□□ 2.89
HOMER3-209ENST00000596482 CLASP1Q7Z460 1538 aa33.06■■■□□ 2.88
HOMER3-209ENST00000596482 FHAD1B1AJZ9 1412 aa33.03■■■□□ 2.88
HOMER3-209ENST00000596482 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
HOMER3-209ENST00000596482 TRIM41Q8WV44 630 aa33.02■■■□□ 2.88
HOMER3-209ENST00000596482 KIF27Q86VH2 1401 aa32.97■■■□□ 2.87
HOMER3-209ENST00000596482 NUP160Q12769 1436 aa32.86■■■□□ 2.85
HOMER3-209ENST00000596482 CEP170Q5SW79 1584 aa32.86■■■□□ 2.85
HOMER3-209ENST00000596482 CUL7Q14999 1698 aa32.82■■■□□ 2.84
HOMER3-209ENST00000596482 ARAP1Q96P48 1450 aa32.8■■■□□ 2.84
HOMER3-209ENST00000596482 IGF1RP08069 1367 aa32.77■■■□□ 2.84
HOMER3-209ENST00000596482 CYB5RLQ6IPT4 315 aa32.71■■■□□ 2.83
HOMER3-209ENST00000596482 RUSC2Q8N2Y8 1516 aa32.66■■■□□ 2.82
HOMER3-209ENST00000596482 SHROOM2Q13796 1616 aa32.64■■■□□ 2.82
HOMER3-209ENST00000596482 CARMIL1Q5VZK9 1371 aa32.62■■■□□ 2.81
HOMER3-209ENST00000596482 ERCC6L2Q5T890 1561 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms