RNA–Protein interactions for RNA: ENST00000596288.5

MCM3-205, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-205ENST00000596288 ARID4BQ4LE39 1312 aaPredicted RBP12.2□□□□□ -0.46
MCM3-205ENST00000596288 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
MCM3-205ENST00000596288 ERICH6BQ5W0A0 696 aa12.19□□□□□ -0.46
MCM3-205ENST00000596288 KIF15Q9NS87 1388 aa12.19□□□□□ -0.46
MCM3-205ENST00000596288 FAM135AQ9P2D6 1515 aa12.18□□□□□ -0.46
MCM3-205ENST00000596288 SHROOM2Q13796 1616 aa12.18□□□□□ -0.46
MCM3-205ENST00000596288 CCDC141Q6ZP82 1450 aa12.18□□□□□ -0.46
MCM3-205ENST00000596288 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
MCM3-205ENST00000596288 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
MCM3-205ENST00000596288 UNC13BO14795 1591 aa12.17□□□□□ -0.46
MCM3-205ENST00000596288 TTC37Q6PGP7 1564 aa12.17□□□□□ -0.46
MCM3-205ENST00000596288 TRPM1Q7Z4N2 1603 aa12.17□□□□□ -0.46
MCM3-205ENST00000596288 HNRNPMP52272 730 aaKnown RBP eCLIP12.16□□□□□ -0.46
MCM3-205ENST00000596288 CHD1O14646 1710 aa12.15□□□□□ -0.46
MCM3-205ENST00000596288 PLA2R1Q13018 1463 aa12.15□□□□□ -0.46
MCM3-205ENST00000596288 SMG6Q86US8 1419 aaKnown RBP12.15□□□□□ -0.46
MCM3-205ENST00000596288 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
MCM3-205ENST00000596288 SYCP2Q9BX26 1530 aa12.15□□□□□ -0.46
MCM3-205ENST00000596288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.14□□□□□ -0.472e-10■■■□□ 17.2
MCM3-205ENST00000596288 PPP4R2Q9NY27 417 aa12.14□□□□□ -0.47
MCM3-205ENST00000596288 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
MCM3-205ENST00000596288 RNF123Q5XPI4 1314 aa12.13□□□□□ -0.47
MCM3-205ENST00000596288 PLXNC1O60486 1568 aa12.13□□□□□ -0.47
MCM3-205ENST00000596288 IQGAP3Q86VI3 1631 aa12.12□□□□□ -0.47
MCM3-205ENST00000596288 TSPY4P0CV99 314 aa12.12□□□□□ -0.47
MCM3-205ENST00000596288 TSPY10P0CW01 314 aa12.12□□□□□ -0.47
MCM3-205ENST00000596288 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
MCM3-205ENST00000596288 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
MCM3-205ENST00000596288 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
MCM3-205ENST00000596288 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
MCM3-205ENST00000596288 LAS1LQ9Y4W2 734 aaKnown RBP12.12□□□□□ -0.47
MCM3-205ENST00000596288 ERCC6L2Q5T890 1561 aa12.11□□□□□ -0.47
MCM3-205ENST00000596288 LAMC1P11047 1609 aa12.11□□□□□ -0.47
MCM3-205ENST00000596288 CARD11Q9BXL7 1154 aa12.11□□□□□ -0.47
MCM3-205ENST00000596288 MAGI2Q86UL8 1455 aa12.11□□□□□ -0.47
MCM3-205ENST00000596288 ST20-MTHFSA0A0A6YYL1 179 aa12.1□□□□□ -0.47
MCM3-205ENST00000596288 MYO5CQ9NQX4 1742 aa12.1□□□□□ -0.47
MCM3-205ENST00000596288 A2MP01023 1474 aa12.1□□□□□ -0.47
MCM3-205ENST00000596288 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
MCM3-205ENST00000596288 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
MCM3-205ENST00000596288 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
MCM3-205ENST00000596288 SKAP1Q86WV1 359 aa12.09□□□□□ -0.47
MCM3-205ENST00000596288 DCAF11Q8TEB1 546 aa12.09□□□□□ -0.47
MCM3-205ENST00000596288 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
MCM3-205ENST00000596288 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
MCM3-205ENST00000596288 ATP10AO60312 1499 aa12.08□□□□□ -0.48
MCM3-205ENST00000596288 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
MCM3-205ENST00000596288 ARHGAP5Q13017 1502 aa12.07□□□□□ -0.48
MCM3-205ENST00000596288 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
MCM3-205ENST00000596288 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
MCM3-205ENST00000596288 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
MCM3-205ENST00000596288 BRD4O60885 1362 aaPredicted RBP12.06□□□□□ -0.48
MCM3-205ENST00000596288 PLEKHH2Q8IVE3 1493 aa12.06□□□□□ -0.48
MCM3-205ENST00000596288 RNF17Q9BXT8 1623 aaKnown RBP12.06□□□□□ -0.48
MCM3-205ENST00000596288 COL17A1Q9UMD9 1497 aaPredicted RBP12.05□□□□□ -0.48
MCM3-205ENST00000596288 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
MCM3-205ENST00000596288 DUOX2Q9NRD8 1548 aa12.04□□□□□ -0.48
MCM3-205ENST00000596288 MYBBP1AQ9BQG0 1328 aaKnown RBP12.04□□□□□ -0.48
MCM3-205ENST00000596288 PER1O15534 1290 aaPredicted RBP12.04□□□□□ -0.48
MCM3-205ENST00000596288 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
MCM3-205ENST00000596288 NOP58Q9Y2X3 529 aaKnown RBP12.03□□□□□ -0.48
MCM3-205ENST00000596288 ZCCHC11Q5TAX3 1644 aaKnown RBP12.02□□□□□ -0.48
MCM3-205ENST00000596288 TESK2Q96S53 571 aa12.02□□□□□ -0.48
MCM3-205ENST00000596288 ERBINQ96RT1 1412 aa12.02□□□□□ -0.48
MCM3-205ENST00000596288 EIF2AK4Q9P2K8 1649 aaKnown RBP12.02□□□□□ -0.49
MCM3-205ENST00000596288 ABCC1P33527 1531 aa12.02□□□□□ -0.49
MCM3-205ENST00000596288 RALBP1Q15311 655 aa12.02□□□□□ -0.49
MCM3-205ENST00000596288 SENP3Q9H4L4 574 aaPredicted RBP12.02□□□□□ -0.49
MCM3-205ENST00000596288 DISP3Q9P2K9 1392 aa12.01□□□□□ -0.49
MCM3-205ENST00000596288 PLCH2O75038 1416 aa12□□□□□ -0.49
MCM3-205ENST00000596288 TMC1Q8TDI8 760 aa12□□□□□ -0.49
MCM3-205ENST00000596288 CLASP1Q7Z460 1538 aa12□□□□□ -0.49
MCM3-205ENST00000596288 ARXQ96QS3 562 aa12□□□□□ -0.49
MCM3-205ENST00000596288 UHRF1BP1LA0JNW5 1464 aa11.99□□□□□ -0.49
MCM3-205ENST00000596288 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
MCM3-205ENST00000596288 IQGAP1P46940 1657 aa11.98□□□□□ -0.49
MCM3-205ENST00000596288 ZMYM4Q5VZL5 1548 aa11.98□□□□□ -0.49
MCM3-205ENST00000596288 RGL3Q3MIN7 710 aa11.98□□□□□ -0.49
MCM3-205ENST00000596288 TRAPPC8Q9Y2L5 1435 aa11.97□□□□□ -0.49
MCM3-205ENST00000596288 DEPDC5O75140 1603 aa11.97□□□□□ -0.49
MCM3-205ENST00000596288 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.49
MCM3-205ENST00000596288 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.5
MCM3-205ENST00000596288 NLRP13Q86W25 1043 aa11.95□□□□□ -0.5
MCM3-205ENST00000596288 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
MCM3-205ENST00000596288 INSRP06213 1382 aa11.95□□□□□ -0.5
MCM3-205ENST00000596288 SPHKAPQ2M3C7 1700 aa11.95□□□□□ -0.5
MCM3-205ENST00000596288 CEP152O94986 1710 aa11.95□□□□□ -0.5
MCM3-205ENST00000596288 TRPM2O94759 1503 aa11.95□□□□□ -0.5
MCM3-205ENST00000596288 PLIN1O60240 522 aa11.95□□□□□ -0.5
MCM3-205ENST00000596288 KCNA4P22459 653 aa11.95□□□□□ -0.5
MCM3-205ENST00000596288 ARAP3Q8WWN8 1544 aa11.95□□□□□ -0.5
MCM3-205ENST00000596288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.59e-9■■■■□ 22.4
MCM3-205ENST00000596288 WDR7Q9Y4E6 1490 aa11.94□□□□□ -0.5
MCM3-205ENST00000596288 WASHC2CQ9Y4E1 1318 aa11.94□□□□□ -0.5
MCM3-205ENST00000596288 VWDEQ8N2E2 1590 aa11.93□□□□□ -0.5
MCM3-205ENST00000596288 PTPRTO14522 1441 aa11.93□□□□□ -0.5
MCM3-205ENST00000596288 ANP32AP39687 249 aaKnown RBP11.93□□□□□ -0.5
MCM3-205ENST00000596288 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
MCM3-205ENST00000596288 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
MCM3-205ENST00000596288 NEFMP07197 916 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms