RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RRP7BPQ9NSQ0 103 aa19.43■□□□□ 0.7
SHKBP1-209ENST00000595803 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
SHKBP1-209ENST00000595803 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
SHKBP1-209ENST00000595803 AFAP1Q8N556 730 aa19.42■□□□□ 0.7
SHKBP1-209ENST00000595803 NPATQ14207 1427 aa19.42■□□□□ 0.7
SHKBP1-209ENST00000595803 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
SHKBP1-209ENST00000595803 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
SHKBP1-209ENST00000595803 ZNF142P52746 1687 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-209ENST00000595803 PIP4K2BP78356 416 aa19.41■□□□□ 0.7
SHKBP1-209ENST00000595803 MYT1LQ9UL68 1186 aa19.41■□□□□ 0.7
SHKBP1-209ENST00000595803 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
SHKBP1-209ENST00000595803 ROCK1Q13464 1354 aa19.39■□□□□ 0.69
SHKBP1-209ENST00000595803 CCDC141Q6ZP82 1450 aa19.39■□□□□ 0.69
SHKBP1-209ENST00000595803 SYCP2Q9BX26 1530 aa19.39■□□□□ 0.69
SHKBP1-209ENST00000595803 MYO3AQ8NEV4 1616 aa19.39■□□□□ 0.69
SHKBP1-209ENST00000595803 MROH2AA6NES4 1674 aa19.39■□□□□ 0.69
SHKBP1-209ENST00000595803 HRCP23327 699 aa19.38■□□□□ 0.69
SHKBP1-209ENST00000595803 MLH3Q9UHC1 1453 aa19.37■□□□□ 0.69
SHKBP1-209ENST00000595803 ANKRD30AQ9BXX3 1397 aa19.37■□□□□ 0.69
SHKBP1-209ENST00000595803 ABCC1P33527 1531 aa19.36■□□□□ 0.69
SHKBP1-209ENST00000595803 PKD2Q13563 968 aa19.36■□□□□ 0.69
SHKBP1-209ENST00000595803 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
SHKBP1-209ENST00000595803 RAB3GAP2Q9H2M9 1393 aa19.35■□□□□ 0.69
SHKBP1-209ENST00000595803 CEP170BQ9Y4F5 1589 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-209ENST00000595803 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-209ENST00000595803 SHANK2Q9UPX8 1470 aa19.34■□□□□ 0.69
SHKBP1-209ENST00000595803 NAIPQ13075 1403 aa19.34■□□□□ 0.69
SHKBP1-209ENST00000595803 TOM1O60784 492 aa19.33■□□□□ 0.68
SHKBP1-209ENST00000595803 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
SHKBP1-209ENST00000595803 SPAG9O60271 1321 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-209ENST00000595803 CROCC2H7BZ55 1655 aa19.32■□□□□ 0.68
SHKBP1-209ENST00000595803 ADGRL2O95490 1459 aa19.31■□□□□ 0.68
SHKBP1-209ENST00000595803 CPS1P31327 1500 aa19.3■□□□□ 0.68
SHKBP1-209ENST00000595803 ZMYM3Q14202 1370 aa19.3■□□□□ 0.68
SHKBP1-209ENST00000595803 ACIN1Q9UKV3 1341 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-209ENST00000595803 ADGBQ8N7X0 1667 aa19.29■□□□□ 0.68
SHKBP1-209ENST00000595803 KIDINS220Q9ULH0 1771 aa19.29■□□□□ 0.68
SHKBP1-209ENST00000595803 ALKQ9UM73 1620 aa19.28■□□□□ 0.68
SHKBP1-209ENST00000595803 MAST1Q9Y2H9 1570 aa19.27■□□□□ 0.68
SHKBP1-209ENST00000595803 RTEL1-TNFRSF6BF6WH68 1400 aa19.26■□□□□ 0.67
SHKBP1-209ENST00000595803 TRIM52Q96A61 297 aa19.26■□□□□ 0.67
SHKBP1-209ENST00000595803 CLTCQ00610 1675 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-209ENST00000595803 KIF15Q9NS87 1388 aa19.25■□□□□ 0.67
SHKBP1-209ENST00000595803 GCC2Q8IWJ2 1684 aa19.24■□□□□ 0.67
SHKBP1-209ENST00000595803 ANKRD50Q9ULJ7 1429 aa19.22■□□□□ 0.67
SHKBP1-209ENST00000595803 NEURL4Q96JN8 1562 aa19.22■□□□□ 0.67
SHKBP1-209ENST00000595803 POLR1AO95602 1720 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-209ENST00000595803 RGS17Q9UGC6 210 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-209ENST00000595803 DHX57Q6P158 1386 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-209ENST00000595803 A2ML1A8K2U0 1454 aa19.18■□□□□ 0.66
SHKBP1-209ENST00000595803 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-209ENST00000595803 ATP7AQ04656 1500 aa19.17■□□□□ 0.66
SHKBP1-209ENST00000595803 ZEB1P37275 1124 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-209ENST00000595803 PLXNC1O60486 1568 aa19.17■□□□□ 0.66
SHKBP1-209ENST00000595803 DUOX2Q9NRD8 1548 aa19.16■□□□□ 0.66
SHKBP1-209ENST00000595803 VWDEQ8N2E2 1590 aa19.16■□□□□ 0.66
SHKBP1-209ENST00000595803 MPHOSPH9Q99550 1183 aa19.13■□□□□ 0.65
SHKBP1-209ENST00000595803 INO80Q9ULG1 1556 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-209ENST00000595803 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-209ENST00000595803 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-209ENST00000595803 ERBINQ96RT1 1412 aa19.11■□□□□ 0.65
SHKBP1-209ENST00000595803 CLSPNQ9HAW4 1339 aa19.11■□□□□ 0.65
SHKBP1-209ENST00000595803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.1■□□□□ 0.65
SHKBP1-209ENST00000595803 NUP155O75694 1391 aa19.09■□□□□ 0.65
SHKBP1-209ENST00000595803 SLC4A1APQ9BWU0 796 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-209ENST00000595803 KIF3BO15066 747 aa19.08■□□□□ 0.64
SHKBP1-209ENST00000595803 A2MP01023 1474 aa19.07■□□□□ 0.64
SHKBP1-209ENST00000595803 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-209ENST00000595803 POTEAQ6S8J7 498 aa19.05■□□□□ 0.64
SHKBP1-209ENST00000595803 SYNMO15061 1565 aa19.05■□□□□ 0.64
SHKBP1-209ENST00000595803 GGT6Q6P531 493 aa19.04■□□□□ 0.64
SHKBP1-209ENST00000595803 LRRC7Q96NW7 1537 aa19.04■□□□□ 0.64
SHKBP1-209ENST00000595803 STRCP1A6NGW2 1772 aa19.04■□□□□ 0.64
SHKBP1-209ENST00000595803 DEPDC5O75140 1603 aa19.02■□□□□ 0.64
SHKBP1-209ENST00000595803 NPHP4O75161 1426 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-209ENST00000595803 MED14O60244 1454 aa19.01■□□□□ 0.63
SHKBP1-209ENST00000595803 IQGAP1P46940 1657 aa19.01■□□□□ 0.63
SHKBP1-209ENST00000595803 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
SHKBP1-209ENST00000595803 KANK1Q14678 1352 aa19■□□□□ 0.63
SHKBP1-209ENST00000595803 TNRQ92752 1358 aa19■□□□□ 0.63
SHKBP1-209ENST00000595803 PZPP20742 1482 aa18.99■□□□□ 0.63
SHKBP1-209ENST00000595803 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
SHKBP1-209ENST00000595803 FOXD1Q16676 465 aa18.98■□□□□ 0.63
SHKBP1-209ENST00000595803 EIF2AK4Q9P2K8 1649 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-209ENST00000595803 KDM5DQ9BY66 1539 aa18.98■□□□□ 0.63
SHKBP1-209ENST00000595803 UNC13BO14795 1591 aa18.98■□□□□ 0.63
SHKBP1-209ENST00000595803 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
SHKBP1-209ENST00000595803 UGGT1Q9NYU2 1555 aa18.94■□□□□ 0.62
SHKBP1-209ENST00000595803 FBXO31Q5XUX0 539 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-209ENST00000595803 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
SHKBP1-209ENST00000595803 NLRP1Q9C000 1473 aa18.91■□□□□ 0.62
SHKBP1-209ENST00000595803 IQGAP3Q86VI3 1631 aa18.91■□□□□ 0.62
SHKBP1-209ENST00000595803 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-209ENST00000595803 ANKRD30BQ9BXX2 1392 aa18.9■□□□□ 0.62
SHKBP1-209ENST00000595803 WASHC2CQ9Y4E1 1318 aa18.89■□□□□ 0.61
SHKBP1-209ENST00000595803 TIMELESSQ9UNS1 1208 aa18.88■□□□□ 0.61
SHKBP1-209ENST00000595803 SRCAPQ6ZRS2 3230 aa18.88■□□□□ 0.61
SHKBP1-209ENST00000595803 ZC3H13Q5T200 1668 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-209ENST00000595803 XIRP1Q702N8 1843 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-209ENST00000595803 PRDM15P57071 1507 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms