RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 NEURL4Q96JN8 1562 aa15.03■□□□□ -0
SRRM1-221ENST00000593639 MBD5Q9P267 1494 aa15.03■□□□□ -0
SRRM1-221ENST00000593639 DHX29Q7Z478 1369 aaKnown RBP15.02■□□□□ -0
SRRM1-221ENST00000593639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.02■□□□□ -0
SRRM1-221ENST00000593639 ANKLE2Q86XL3 938 aa15.01□□□□□ -0.01
SRRM1-221ENST00000593639 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
SRRM1-221ENST00000593639 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
SRRM1-221ENST00000593639 KIF3BO15066 747 aa15□□□□□ -0.01
SRRM1-221ENST00000593639 PZPP20742 1482 aa15□□□□□ -0.01
SRRM1-221ENST00000593639 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
SRRM1-221ENST00000593639 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
SRRM1-221ENST00000593639 VWDEQ8N2E2 1590 aa14.99□□□□□ -0.01
SRRM1-221ENST00000593639 THEMISQ8N1K5 641 aaPredicted RBP14.98□□□□□ -0.01
SRRM1-221ENST00000593639 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
SRRM1-221ENST00000593639 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
SRRM1-221ENST00000593639 NPHP4O75161 1426 aaPredicted RBP14.97□□□□□ -0.01
SRRM1-221ENST00000593639 MIA2Q96PC5 1412 aa14.97□□□□□ -0.01
SRRM1-221ENST00000593639 ADGBQ8N7X0 1667 aa14.97□□□□□ -0.01
SRRM1-221ENST00000593639 KDM5DQ9BY66 1539 aa14.96□□□□□ -0.02
SRRM1-221ENST00000593639 MED14O60244 1454 aa14.95□□□□□ -0.02
SRRM1-221ENST00000593639 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
SRRM1-221ENST00000593639 TIAM1Q13009 1591 aa14.94□□□□□ -0.02
SRRM1-221ENST00000593639 UGGT1Q9NYU2 1555 aa14.93□□□□□ -0.02
SRRM1-221ENST00000593639 FAM135AQ9P2D6 1515 aa14.92□□□□□ -0.02
SRRM1-221ENST00000593639 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
SRRM1-221ENST00000593639 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
SRRM1-221ENST00000593639 CEP162Q5TB80 1403 aa14.92□□□□□ -0.02
SRRM1-221ENST00000593639 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
SRRM1-221ENST00000593639 RGS17Q9UGC6 210 aaPredicted RBP14.91□□□□□ -0.02
SRRM1-221ENST00000593639 DEPDC5O75140 1603 aa14.89□□□□□ -0.03
SRRM1-221ENST00000593639 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
SRRM1-221ENST00000593639 RSPH4AQ5TD94 716 aa14.88□□□□□ -0.03
SRRM1-221ENST00000593639 CAMSAP2Q08AD1 1489 aa14.87□□□□□ -0.03
SRRM1-221ENST00000593639 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
SRRM1-221ENST00000593639 NCOA2Q15596 1464 aa14.84□□□□□ -0.03
SRRM1-221ENST00000593639 RNF17Q9BXT8 1623 aaKnown RBP14.84□□□□□ -0.03
SRRM1-221ENST00000593639 ERVK-7P63135 1459 aa14.83□□□□□ -0.03
SRRM1-221ENST00000593639 STRCP1A6NGW2 1772 aa14.83□□□□□ -0.03
SRRM1-221ENST00000593639 ABCC3O15438 1527 aa14.83□□□□□ -0.04
SRRM1-221ENST00000593639 TSPY4P0CV99 314 aa14.83□□□□□ -0.04
SRRM1-221ENST00000593639 TSPY10P0CW01 314 aa14.83□□□□□ -0.04
SRRM1-221ENST00000593639 LTKP29376 864 aa14.82□□□□□ -0.04
SRRM1-221ENST00000593639 SYNMO15061 1565 aa14.81□□□□□ -0.04
SRRM1-221ENST00000593639 SCAF11Q99590 1463 aaKnown RBP14.81□□□□□ -0.04
SRRM1-221ENST00000593639 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
SRRM1-221ENST00000593639 TXNDC2Q86VQ3 553 aa14.79□□□□□ -0.04
SRRM1-221ENST00000593639 ARHGEF5Q12774 1597 aa14.78□□□□□ -0.04
SRRM1-221ENST00000593639 ARHGAP23Q9P227 1491 aa14.77□□□□□ -0.04
SRRM1-221ENST00000593639 ZC3H13Q5T200 1668 aaKnown RBP14.77□□□□□ -0.05
SRRM1-221ENST00000593639 FAM135BQ49AJ0 1406 aa14.76□□□□□ -0.05
SRRM1-221ENST00000593639 SLIT1O75093 1534 aa14.75□□□□□ -0.05
SRRM1-221ENST00000593639 MROH1Q8NDA8 1641 aa14.74□□□□□ -0.05
SRRM1-221ENST00000593639 TMEM94Q12767 1356 aa14.73□□□□□ -0.05
SRRM1-221ENST00000593639 EID1Q9Y6B2 187 aa14.73□□□□□ -0.05
SRRM1-221ENST00000593639 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
SRRM1-221ENST00000593639 RBM33Q96EV2 1170 aaKnown RBP14.72□□□□□ -0.05
SRRM1-221ENST00000593639 MAST1Q9Y2H9 1570 aa14.72□□□□□ -0.05
SRRM1-221ENST00000593639 TMEM2Q9UHN6 1383 aa14.72□□□□□ -0.05
SRRM1-221ENST00000593639 ARHGAP31Q2M1Z3 1444 aa14.7□□□□□ -0.06
SRRM1-221ENST00000593639 EIF2AK4Q9P2K8 1649 aaKnown RBP14.7□□□□□ -0.06
SRRM1-221ENST00000593639 KCNA6P17658 529 aa14.69□□□□□ -0.06
SRRM1-221ENST00000593639 SLC26A8Q96RN1 970 aa14.68□□□□□ -0.06
SRRM1-221ENST00000593639 LRRC9Q6ZRR7 1453 aa14.68□□□□□ -0.06
SRRM1-221ENST00000593639 MAP3K1Q13233 1512 aa14.67□□□□□ -0.06
SRRM1-221ENST00000593639 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
SRRM1-221ENST00000593639 DUOX2Q9NRD8 1548 aa14.66□□□□□ -0.06
SRRM1-221ENST00000593639 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
SRRM1-221ENST00000593639 KIF15Q9NS87 1388 aa14.66□□□□□ -0.06
SRRM1-221ENST00000593639 IDI1Q13907 227 aa14.66□□□□□ -0.06
SRRM1-221ENST00000593639 KANK4Q5T7N3 995 aaPredicted RBP14.66□□□□□ -0.06
SRRM1-221ENST00000593639 PROSER2Q86WR7 435 aaPredicted RBP14.66□□□□□ -0.06
SRRM1-221ENST00000593639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.062e-10■■■□□ 19
SRRM1-221ENST00000593639 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
SRRM1-221ENST00000593639 CEP152O94986 1710 aa14.65□□□□□ -0.06
SRRM1-221ENST00000593639 PRDM15P57071 1507 aaPredicted RBP14.65□□□□□ -0.06
SRRM1-221ENST00000593639 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
SRRM1-221ENST00000593639 ROBO1Q9Y6N7 1651 aa14.63□□□□□ -0.07
SRRM1-221ENST00000593639 ERBINQ96RT1 1412 aa14.63□□□□□ -0.07
SRRM1-221ENST00000593639 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
SRRM1-221ENST00000593639 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
SRRM1-221ENST00000593639 SLAIN2Q9P270 581 aa14.62□□□□□ -0.07
SRRM1-221ENST00000593639 TET3O43151 1660 aa14.61□□□□□ -0.07
SRRM1-221ENST00000593639 JCADQ9P266 1359 aa14.61□□□□□ -0.07
SRRM1-221ENST00000593639 SRCAPQ6ZRS2 3230 aa14.61□□□□□ -0.07
SRRM1-221ENST00000593639 ABCC5O15440 1437 aa14.61□□□□□ -0.07
SRRM1-221ENST00000593639 MSH6P52701 1360 aa14.6□□□□□ -0.07
SRRM1-221ENST00000593639 VPS8Q8N3P4 1428 aa14.59□□□□□ -0.07
SRRM1-221ENST00000593639 NKTRP30414 1462 aaKnown RBP14.59□□□□□ -0.07
SRRM1-221ENST00000593639 KANK1Q14678 1352 aa14.59□□□□□ -0.07
SRRM1-221ENST00000593639 CFAP65Q6ZU64 1925 aaKnown RBP14.58□□□□□ -0.07
SRRM1-221ENST00000593639 SETD1AO15047 1707 aaKnown RBP14.58□□□□□ -0.08
SRRM1-221ENST00000593639 NWD1Q149M9 1564 aa14.57□□□□□ -0.08
SRRM1-221ENST00000593639 UPF1Q92900 1129 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRRM1-221ENST00000593639 BCANQ96GW7 911 aa14.57□□□□□ -0.08
SRRM1-221ENST00000593639 NOS1P29475 1434 aa14.57□□□□□ -0.08
SRRM1-221ENST00000593639 LMTK2Q8IWU2 1503 aa14.56□□□□□ -0.08
SRRM1-221ENST00000593639 LRP6O75581 1613 aa14.55□□□□□ -0.08
SRRM1-221ENST00000593639 TRIM52Q96A61 297 aa14.54□□□□□ -0.08
SRRM1-221ENST00000593639 SLC52A1Q9NWF4 448 aa14.54□□□□□ -0.08
SRRM1-221ENST00000593639 ADGRB3O60242 1522 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms