RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 POGZQ7Z3K3 1410 aa16.08■□□□□ 0.16
DNMT1-228ENST00000592705 ST20-MTHFSA0A0A6YYL1 179 aa16.08■□□□□ 0.16
DNMT1-228ENST00000592705 IFT140Q96RY7 1462 aa16.08■□□□□ 0.16
DNMT1-228ENST00000592705 USP47Q96K76 1375 aa16.07■□□□□ 0.16
DNMT1-228ENST00000592705 PSME1Q06323 249 aa16.07■□□□□ 0.16
DNMT1-228ENST00000592705 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
DNMT1-228ENST00000592705 DNTTIP2Q5QJE6 756 aaKnown RBP16.07■□□□□ 0.16
DNMT1-228ENST00000592705 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
DNMT1-228ENST00000592705 LTV1Q96GA3 475 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-228ENST00000592705 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-228ENST00000592705 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.167e-7■□□□□ 10.4
DNMT1-228ENST00000592705 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
DNMT1-228ENST00000592705 PRG4Q92954 1404 aaPredicted RBP16.05■□□□□ 0.16
DNMT1-228ENST00000592705 PTMSP20962 102 aa16.05■□□□□ 0.16
DNMT1-228ENST00000592705 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
DNMT1-228ENST00000592705 CCDC144AA2RUR9 1427 aa16.05■□□□□ 0.16
DNMT1-228ENST00000592705 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-228ENST00000592705 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
DNMT1-228ENST00000592705 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
DNMT1-228ENST00000592705 SPRYD3Q8NCJ5 442 aa16.04■□□□□ 0.16
DNMT1-228ENST00000592705 THEMISQ8N1K5 641 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-228ENST00000592705 ISY1Q9ULR0 285 aaKnown RBP16.04■□□□□ 0.16
DNMT1-228ENST00000592705 RRP1P56182 461 aaKnown RBP16.03■□□□□ 0.16
DNMT1-228ENST00000592705 USP35Q9P2H5 1018 aa16.03■□□□□ 0.16
DNMT1-228ENST00000592705 CENPJQ9HC77 1338 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-228ENST00000592705 MCCP23508 829 aa16.02■□□□□ 0.16
DNMT1-228ENST00000592705 ITPRIPQ8IWB1 547 aa16.02■□□□□ 0.16
DNMT1-228ENST00000592705 GBP4Q96PP9 640 aa16.02■□□□□ 0.15
DNMT1-228ENST00000592705 TRAK1Q9UPV9 953 aa16.02■□□□□ 0.15
DNMT1-228ENST00000592705 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
DNMT1-228ENST00000592705 CASKIN1Q8WXD9 1431 aa16.01■□□□□ 0.15
DNMT1-228ENST00000592705 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
DNMT1-228ENST00000592705 CENPQQ7L2Z9 268 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-228ENST00000592705 PANK3Q9H999 370 aa16.01■□□□□ 0.15
DNMT1-228ENST00000592705 CNTLNQ9NXG0 1405 aa16.01■□□□□ 0.15
DNMT1-228ENST00000592705 ARAP1Q96P48 1450 aa16■□□□□ 0.15
DNMT1-228ENST00000592705 PDE4AP27815 886 aa16■□□□□ 0.15
DNMT1-228ENST00000592705 SLKQ9H2G2 1235 aaPredicted RBP16■□□□□ 0.15
DNMT1-228ENST00000592705 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
DNMT1-228ENST00000592705 TPRNQ4KMQ1 711 aa15.99■□□□□ 0.15
DNMT1-228ENST00000592705 TXNDC2Q86VQ3 553 aa15.98■□□□□ 0.15
DNMT1-228ENST00000592705 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
DNMT1-228ENST00000592705 NESP48681 1621 aa15.98■□□□□ 0.15
DNMT1-228ENST00000592705 MSNP26038 577 aaKnown RBP15.97■□□□□ 0.15
DNMT1-228ENST00000592705 PIP4K2BP78356 416 aa15.97■□□□□ 0.15
DNMT1-228ENST00000592705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.15
DNMT1-228ENST00000592705 SMC4Q9NTJ3 1288 aa15.97■□□□□ 0.15
DNMT1-228ENST00000592705 FYCO1Q9BQS8 1478 aa15.96■□□□□ 0.15
DNMT1-228ENST00000592705 TAF7LQ5H9L4 462 aa15.96■□□□□ 0.15
DNMT1-228ENST00000592705 ANKLE2Q86XL3 938 aa15.96■□□□□ 0.15
DNMT1-228ENST00000592705 SYTL4Q96C24 671 aaPredicted RBP15.96■□□□□ 0.14
DNMT1-228ENST00000592705 KIF7Q2M1P5 1343 aa15.96■□□□□ 0.14
DNMT1-228ENST00000592705 FAM161AQ3B820 660 aa15.95■□□□□ 0.14
DNMT1-228ENST00000592705 TULP1O00294 542 aaPredicted RBP15.95■□□□□ 0.14
DNMT1-228ENST00000592705 PLCB2Q00722 1185 aa15.95■□□□□ 0.14
DNMT1-228ENST00000592705 KCNJ4P48050 445 aa15.95■□□□□ 0.14
DNMT1-228ENST00000592705 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
DNMT1-228ENST00000592705 DMRT2Q9Y5R5 561 aa15.94■□□□□ 0.14
DNMT1-228ENST00000592705 FGD1P98174 961 aa15.94■□□□□ 0.14
DNMT1-228ENST00000592705 HDAC5Q9UQL6 1122 aa15.94■□□□□ 0.14
DNMT1-228ENST00000592705 C1orf141Q5JVX7 400 aa15.94■□□□□ 0.14
DNMT1-228ENST00000592705 MFAP1P55081 439 aaKnown RBP15.93■□□□□ 0.14
DNMT1-228ENST00000592705 PRXQ9BXM0 1461 aa15.93■□□□□ 0.14
DNMT1-228ENST00000592705 E9PSI1 815 aa15.93■□□□□ 0.14
DNMT1-228ENST00000592705 COG3Q96JB2 828 aa15.93■□□□□ 0.14
DNMT1-228ENST00000592705 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
DNMT1-228ENST00000592705 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
DNMT1-228ENST00000592705 CRBNQ96SW2 442 aa15.92■□□□□ 0.14
DNMT1-228ENST00000592705 GOLGA6L3A6NEY3 463 aa15.92■□□□□ 0.14
DNMT1-228ENST00000592705 GOLGA6L6A8MZA4 724 aa15.91■□□□□ 0.14
DNMT1-228ENST00000592705 WASHC2AQ641Q2 1341 aa15.91■□□□□ 0.14
DNMT1-228ENST00000592705 PLIN1O60240 522 aa15.91■□□□□ 0.14
DNMT1-228ENST00000592705 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
DNMT1-228ENST00000592705 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
DNMT1-228ENST00000592705 GZF1Q9H116 711 aaPredicted RBP15.9■□□□□ 0.14
DNMT1-228ENST00000592705 MINK1Q8N4C8 1332 aaPredicted RBP15.9■□□□□ 0.14
DNMT1-228ENST00000592705 GOLGA6L4A6NEF3 574 aa15.9■□□□□ 0.14
DNMT1-228ENST00000592705 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
DNMT1-228ENST00000592705 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
DNMT1-228ENST00000592705 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
DNMT1-228ENST00000592705 MIA2Q96PC5 1412 aa15.9■□□□□ 0.14
DNMT1-228ENST00000592705 EVC2Q86UK5 1308 aa15.9■□□□□ 0.14
DNMT1-228ENST00000592705 AFAP1Q8N556 730 aa15.9■□□□□ 0.14
DNMT1-228ENST00000592705 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
DNMT1-228ENST00000592705 CGNL1Q0VF96 1302 aa15.89■□□□□ 0.13
DNMT1-228ENST00000592705 GORABQ5T7V8 394 aa15.88■□□□□ 0.13
DNMT1-228ENST00000592705 CHMP3Q9Y3E7 222 aa15.88■□□□□ 0.13
DNMT1-228ENST00000592705 FRAT2O75474 233 aaPredicted RBP15.88■□□□□ 0.13
DNMT1-228ENST00000592705 EFCAB5A4FU69 1503 aa15.87■□□□□ 0.13
DNMT1-228ENST00000592705 CHAF1AQ13111 956 aaPredicted RBP15.87■□□□□ 0.13
DNMT1-228ENST00000592705 APBB1O00213 710 aa15.87■□□□□ 0.13
DNMT1-228ENST00000592705 LMOD3Q0VAK6 560 aa15.87■□□□□ 0.13
DNMT1-228ENST00000592705 TTC5Q8N0Z6 440 aa15.87■□□□□ 0.13
DNMT1-228ENST00000592705 CFTRP13569 1480 aa15.86■□□□□ 0.13
DNMT1-228ENST00000592705 GPRASP1Q5JY77 1395 aa15.86■□□□□ 0.13
DNMT1-228ENST00000592705 NRDCO43847 1150 aa15.85■□□□□ 0.13
DNMT1-228ENST00000592705 TEFQ10587 303 aa15.85■□□□□ 0.13
DNMT1-228ENST00000592705 BRD4O60885 1362 aaPredicted RBP15.85■□□□□ 0.13
DNMT1-228ENST00000592705 KIAA1211Q6ZU35 1233 aa15.85■□□□□ 0.13
DNMT1-228ENST00000592705 RAPGEF4Q8WZA2 1011 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms