RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
NPC1-211ENST00000591075 HSPA2P54652 639 aa13.39□□□□□ -0.27
NPC1-211ENST00000591075 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
NPC1-211ENST00000591075 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
NPC1-211ENST00000591075 UHRF1BP1Q6BDS2 1440 aa13.37□□□□□ -0.27
NPC1-211ENST00000591075 ADGBQ8N7X0 1667 aa13.37□□□□□ -0.27
NPC1-211ENST00000591075 ARHGEF5Q12774 1597 aa13.37□□□□□ -0.27
NPC1-211ENST00000591075 ZMYM3Q14202 1370 aa13.36□□□□□ -0.27
NPC1-211ENST00000591075 WASHC2CQ9Y4E1 1318 aa13.36□□□□□ -0.27
NPC1-211ENST00000591075 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
NPC1-211ENST00000591075 SETD1BQ9UPS6 1966 aaKnown RBP13.34□□□□□ -0.27
NPC1-211ENST00000591075 FGD6Q6ZV73 1430 aa13.34□□□□□ -0.27
NPC1-211ENST00000591075 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
NPC1-211ENST00000591075 PLXNC1O60486 1568 aa13.32□□□□□ -0.28
NPC1-211ENST00000591075 CAPN15O75808 1086 aa13.32□□□□□ -0.28
NPC1-211ENST00000591075 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
NPC1-211ENST00000591075 CHIC2Q9UKJ5 165 aa13.32□□□□□ -0.28
NPC1-211ENST00000591075 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
NPC1-211ENST00000591075 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
NPC1-211ENST00000591075 TCOF1Q13428 1488 aaKnown RBP13.3□□□□□ -0.28
NPC1-211ENST00000591075 C3P01024 1663 aa13.29□□□□□ -0.28
NPC1-211ENST00000591075 PREX1Q8TCU6 1659 aa13.29□□□□□ -0.28
NPC1-211ENST00000591075 ANKRD30AQ9BXX3 1397 aa13.29□□□□□ -0.28
NPC1-211ENST00000591075 KIF15Q9NS87 1388 aa13.29□□□□□ -0.28
NPC1-211ENST00000591075 ABCC5O15440 1437 aa13.29□□□□□ -0.28
NPC1-211ENST00000591075 NPATQ14207 1427 aa13.29□□□□□ -0.28
NPC1-211ENST00000591075 DAPK1P53355 1430 aa13.28□□□□□ -0.28
NPC1-211ENST00000591075 MAST1Q9Y2H9 1570 aa13.28□□□□□ -0.28
NPC1-211ENST00000591075 CLTCQ00610 1675 aaKnown RBP13.28□□□□□ -0.28
NPC1-211ENST00000591075 MROH2AA6NES4 1674 aa13.27□□□□□ -0.29
NPC1-211ENST00000591075 DUOX2Q9NRD8 1548 aa13.26□□□□□ -0.29
NPC1-211ENST00000591075 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
NPC1-211ENST00000591075 KANK1Q14678 1352 aa13.25□□□□□ -0.29
NPC1-211ENST00000591075 HRCP23327 699 aa13.25□□□□□ -0.29
NPC1-211ENST00000591075 KDM5DQ9BY66 1539 aa13.24□□□□□ -0.29
NPC1-211ENST00000591075 PTPRKQ15262 1439 aa13.24□□□□□ -0.29
NPC1-211ENST00000591075 ITGAEP38570 1179 aa13.24□□□□□ -0.29
NPC1-211ENST00000591075 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
NPC1-211ENST00000591075 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
NPC1-211ENST00000591075 TNRQ92752 1358 aa13.23□□□□□ -0.29
NPC1-211ENST00000591075 FBXO31Q5XUX0 539 aaPredicted RBP13.23□□□□□ -0.29
NPC1-211ENST00000591075 DNMT1P26358 1616 aaKnown RBP13.23□□□□□ -0.29
NPC1-211ENST00000591075 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
NPC1-211ENST00000591075 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
NPC1-211ENST00000591075 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
NPC1-211ENST00000591075 PZPP20742 1482 aa13.2□□□□□ -0.3
NPC1-211ENST00000591075 EIF2AK4Q9P2K8 1649 aaKnown RBP13.2□□□□□ -0.3
NPC1-211ENST00000591075 CROCC2H7BZ55 1655 aa13.19□□□□□ -0.3
NPC1-211ENST00000591075 PKD2Q13563 968 aa13.19□□□□□ -0.3
NPC1-211ENST00000591075 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
NPC1-211ENST00000591075 ROCK1Q13464 1354 aa13.19□□□□□ -0.3
NPC1-211ENST00000591075 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
NPC1-211ENST00000591075 THEMISQ8N1K5 641 aaPredicted RBP13.18□□□□□ -0.3
NPC1-211ENST00000591075 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
NPC1-211ENST00000591075 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
NPC1-211ENST00000591075 ABCC3O15438 1527 aa13.17□□□□□ -0.3
NPC1-211ENST00000591075 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
NPC1-211ENST00000591075 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
NPC1-211ENST00000591075 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
NPC1-211ENST00000591075 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
NPC1-211ENST00000591075 PTPRTO14522 1441 aa13.15□□□□□ -0.3
NPC1-211ENST00000591075 ANKRD50Q9ULJ7 1429 aa13.15□□□□□ -0.3
NPC1-211ENST00000591075 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
NPC1-211ENST00000591075 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
NPC1-211ENST00000591075 FBXO41Q8TF61 875 aa13.15□□□□□ -0.3
NPC1-211ENST00000591075 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
NPC1-211ENST00000591075 NLRP1Q9C000 1473 aa13.14□□□□□ -0.31
NPC1-211ENST00000591075 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
NPC1-211ENST00000591075 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
NPC1-211ENST00000591075 PLA2R1Q13018 1463 aa13.12□□□□□ -0.31
NPC1-211ENST00000591075 HFM1A2PYH4 1435 aa13.12□□□□□ -0.31
NPC1-211ENST00000591075 CHRDL2Q6WN34 429 aa13.11□□□□□ -0.31
NPC1-211ENST00000591075 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
NPC1-211ENST00000591075 STRCQ7RTU9 1775 aa13.11□□□□□ -0.31
NPC1-211ENST00000591075 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
NPC1-211ENST00000591075 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
NPC1-211ENST00000591075 ZNF142P52746 1687 aaPredicted RBP13.1□□□□□ -0.31
NPC1-211ENST00000591075 UGGT1Q9NYU2 1555 aa13.1□□□□□ -0.31
NPC1-211ENST00000591075 CEP152O94986 1710 aa13.1□□□□□ -0.31
NPC1-211ENST00000591075 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
NPC1-211ENST00000591075 EID1Q9Y6B2 187 aa13.09□□□□□ -0.31
NPC1-211ENST00000591075 MROH1Q8NDA8 1641 aa13.09□□□□□ -0.31
NPC1-211ENST00000591075 SPATA31D1Q6ZQQ2 1576 aa13.07□□□□□ -0.32
NPC1-211ENST00000591075 NUP155O75694 1391 aa13.07□□□□□ -0.32
NPC1-211ENST00000591075 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
NPC1-211ENST00000591075 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
NPC1-211ENST00000591075 DEPDC5O75140 1603 aa13.06□□□□□ -0.32
NPC1-211ENST00000591075 NAIPQ13075 1403 aa13.05□□□□□ -0.32
NPC1-211ENST00000591075 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
NPC1-211ENST00000591075 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
NPC1-211ENST00000591075 BCANQ96GW7 911 aa13.05□□□□□ -0.32
NPC1-211ENST00000591075 ZNF335Q9H4Z2 1342 aaPredicted RBP13.05□□□□□ -0.32
NPC1-211ENST00000591075 LMTK2Q8IWU2 1503 aa13.04□□□□□ -0.32
NPC1-211ENST00000591075 IDI1Q13907 227 aa13.04□□□□□ -0.32
NPC1-211ENST00000591075 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
NPC1-211ENST00000591075 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
NPC1-211ENST00000591075 RAB3GAP2Q9H2M9 1393 aa13.03□□□□□ -0.32
NPC1-211ENST00000591075 NPHP4O75161 1426 aaPredicted RBP13.03□□□□□ -0.32
NPC1-211ENST00000591075 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.32
NPC1-211ENST00000591075 PPP1R15AO75807 674 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms