RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
NPC1-211ENST00000591075 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
NPC1-211ENST00000591075 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
NPC1-211ENST00000591075 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
NPC1-211ENST00000591075 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
NPC1-211ENST00000591075 POTEDQ86YR6 584 aa19.03■□□□□ 0.64
NPC1-211ENST00000591075 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
NPC1-211ENST00000591075 ABCC9O60706 1549 aa18.48■□□□□ 0.55
NPC1-211ENST00000591075 FOXD1Q16676 465 aa18.34■□□□□ 0.53
NPC1-211ENST00000591075 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
NPC1-211ENST00000591075 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
NPC1-211ENST00000591075 NACADO15069 1562 aa17.61■□□□□ 0.41
NPC1-211ENST00000591075 MSH5O43196 834 aa17.5■□□□□ 0.39
NPC1-211ENST00000591075 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
NPC1-211ENST00000591075 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
NPC1-211ENST00000591075 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
NPC1-211ENST00000591075 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
NPC1-211ENST00000591075 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
NPC1-211ENST00000591075 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
NPC1-211ENST00000591075 BICRAQ9NZM4 1560 aa17.04■□□□□ 0.32
NPC1-211ENST00000591075 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
NPC1-211ENST00000591075 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
NPC1-211ENST00000591075 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
NPC1-211ENST00000591075 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
NPC1-211ENST00000591075 CC2D2AQ9P2K1 1620 aa16.64■□□□□ 0.25
NPC1-211ENST00000591075 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
NPC1-211ENST00000591075 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
NPC1-211ENST00000591075 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
NPC1-211ENST00000591075 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
NPC1-211ENST00000591075 NCAPD3P42695 1498 aa16.24■□□□□ 0.19
NPC1-211ENST00000591075 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
NPC1-211ENST00000591075 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
NPC1-211ENST00000591075 ADRA2BP18089 450 aa16.19■□□□□ 0.18
NPC1-211ENST00000591075 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
NPC1-211ENST00000591075 HMGXB3Q12766 1538 aa16.13■□□□□ 0.17
NPC1-211ENST00000591075 MROH2BQ7Z745 1585 aa16.12■□□□□ 0.17
NPC1-211ENST00000591075 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
NPC1-211ENST00000591075 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
NPC1-211ENST00000591075 WIZO95785 1651 aa15.93■□□□□ 0.14
NPC1-211ENST00000591075 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
NPC1-211ENST00000591075 NESP48681 1621 aa15.9■□□□□ 0.14
NPC1-211ENST00000591075 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.13
NPC1-211ENST00000591075 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
NPC1-211ENST00000591075 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
NPC1-211ENST00000591075 CUX2O14529 1486 aa15.8■□□□□ 0.12
NPC1-211ENST00000591075 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
NPC1-211ENST00000591075 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
NPC1-211ENST00000591075 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
NPC1-211ENST00000591075 KIF21AQ7Z4S6 1674 aa15.66■□□□□ 0.1
NPC1-211ENST00000591075 CFTRP13569 1480 aa15.65■□□□□ 0.1
NPC1-211ENST00000591075 FANCD2Q9BXW9 1451 aa15.63■□□□□ 0.09
NPC1-211ENST00000591075 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
NPC1-211ENST00000591075 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
NPC1-211ENST00000591075 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
NPC1-211ENST00000591075 MRC2Q9UBG0 1479 aa15.62■□□□□ 0.09
NPC1-211ENST00000591075 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
NPC1-211ENST00000591075 DNAJC5Q9H3Z4 198 aa15.52■□□□□ 0.08
NPC1-211ENST00000591075 WDR62O43379 1518 aa15.52■□□□□ 0.07
NPC1-211ENST00000591075 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
NPC1-211ENST00000591075 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
NPC1-211ENST00000591075 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
NPC1-211ENST00000591075 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
NPC1-211ENST00000591075 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
NPC1-211ENST00000591075 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
NPC1-211ENST00000591075 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
NPC1-211ENST00000591075 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
NPC1-211ENST00000591075 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
NPC1-211ENST00000591075 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
NPC1-211ENST00000591075 SOGA1O94964 1423 aa15.19■□□□□ 0.02
NPC1-211ENST00000591075 POLA1P09884 1462 aaPredicted RBP15.19■□□□□ 0.02
NPC1-211ENST00000591075 FBLN2P98095 1184 aa15.15■□□□□ 0.02
NPC1-211ENST00000591075 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.011e-8■■■■□ 24.6
NPC1-211ENST00000591075 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
NPC1-211ENST00000591075 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
NPC1-211ENST00000591075 CUX1P39880 1505 aa15.13■□□□□ 0.01
NPC1-211ENST00000591075 TDRD9Q8NDG6 1382 aaKnown RBP15.12■□□□□ 0.01
NPC1-211ENST00000591075 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
NPC1-211ENST00000591075 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
NPC1-211ENST00000591075 TRIM41Q8WV44 630 aa15.07■□□□□ 0
NPC1-211ENST00000591075 WRNQ14191 1432 aaPredicted RBP eCLIP15.07■□□□□ 0
NPC1-211ENST00000591075 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
NPC1-211ENST00000591075 WDR97A6NE52 1622 aa15.02□□□□□ -0.01
NPC1-211ENST00000591075 GRIN2BQ13224 1484 aa15.01□□□□□ -0.01
NPC1-211ENST00000591075 GAPVD1Q14C86 1478 aa15□□□□□ -0.01
NPC1-211ENST00000591075 SNAPC4Q5SXM2 1469 aa14.99□□□□□ -0.01
NPC1-211ENST00000591075 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
NPC1-211ENST00000591075 MAGI1Q96QZ7 1491 aaPredicted RBP14.96□□□□□ -0.01
NPC1-211ENST00000591075 TOP2BQ02880 1626 aa14.96□□□□□ -0.01
NPC1-211ENST00000591075 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
NPC1-211ENST00000591075 CHD1O14646 1710 aa14.94□□□□□ -0.02
NPC1-211ENST00000591075 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
NPC1-211ENST00000591075 SYNJ2O15056 1496 aa14.91□□□□□ -0.02
NPC1-211ENST00000591075 RNF39Q9H2S5 420 aa14.9□□□□□ -0.02
NPC1-211ENST00000591075 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
NPC1-211ENST00000591075 ABCA5Q8WWZ7 1642 aa14.87□□□□□ -0.03
NPC1-211ENST00000591075 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
NPC1-211ENST00000591075 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
NPC1-211ENST00000591075 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
NPC1-211ENST00000591075 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
NPC1-211ENST00000591075 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms