RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 NEUROD1Q13562 356 aa27.89■■■□□ 2.06
POLR2E-207ENST00000590060 KANK1Q14678 1352 aa27.87■■■□□ 2.05
POLR2E-207ENST00000590060 FRMPD1Q5SYB0 1578 aa27.87■■■□□ 2.05
POLR2E-207ENST00000590060 RAPGEF3O95398 923 aa27.87■■■□□ 2.05
POLR2E-207ENST00000590060 DEPDC5O75140 1603 aa27.87■■■□□ 2.05
POLR2E-207ENST00000590060 ABCA6Q8N139 1617 aa27.87■■■□□ 2.05
POLR2E-207ENST00000590060 PKD2Q13563 968 aa27.85■■■□□ 2.05
POLR2E-207ENST00000590060 SIN3AQ96ST3 1273 aa27.85■■■□□ 2.05
POLR2E-207ENST00000590060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.84■■■□□ 2.05
POLR2E-207ENST00000590060 ANKRD30BQ9BXX2 1392 aa27.84■■■□□ 2.05
POLR2E-207ENST00000590060 DIP2CQ9Y2E4 1556 aa27.83■■■□□ 2.05
POLR2E-207ENST00000590060 PRDM15P57071 1507 aaPredicted RBP27.81■■■□□ 2.04
POLR2E-207ENST00000590060 KIF3BO15066 747 aa27.79■■■□□ 2.04
POLR2E-207ENST00000590060 BCORL1Q5H9F3 1711 aa27.78■■■□□ 2.04
POLR2E-207ENST00000590060 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
POLR2E-207ENST00000590060 FOXD1Q16676 465 aa27.78■■■□□ 2.04
POLR2E-207ENST00000590060 RPRD2Q5VT52 1461 aaKnown RBP27.76■■■□□ 2.04
POLR2E-207ENST00000590060 VWDEQ8N2E2 1590 aa27.73■■■□□ 2.03
POLR2E-207ENST00000590060 TET3O43151 1660 aa27.72■■■□□ 2.03
POLR2E-207ENST00000590060 TRHP20396 242 aaPredicted RBP27.71■■■□□ 2.03
POLR2E-207ENST00000590060 YEATS2Q9ULM3 1422 aa27.71■■■□□ 2.03
POLR2E-207ENST00000590060 REREQ9P2R6 1566 aa27.7■■■□□ 2.03
POLR2E-207ENST00000590060 MROH1Q8NDA8 1641 aa27.7■■■□□ 2.02
POLR2E-207ENST00000590060 ATP10AO60312 1499 aa27.7■■■□□ 2.02
POLR2E-207ENST00000590060 ARHGEF40Q8TER5 1519 aa27.68■■■□□ 2.02
POLR2E-207ENST00000590060 LMTK2Q8IWU2 1503 aa27.67■■■□□ 2.02
POLR2E-207ENST00000590060 CCDC144AA2RUR9 1427 aa27.65■■■□□ 2.02
POLR2E-207ENST00000590060 EFCAB6Q5THR3 1501 aa27.62■■■□□ 2.01
POLR2E-207ENST00000590060 ZC3H13Q5T200 1668 aaKnown RBP27.61■■■□□ 2.01
POLR2E-207ENST00000590060 AGLP35573 1532 aa27.61■■■□□ 2.01
POLR2E-207ENST00000590060 E9PCH4 1651 aa27.6■■■□□ 2.01
POLR2E-207ENST00000590060 PPP1R15AO75807 674 aaPredicted RBP27.6■■■□□ 2.01
POLR2E-207ENST00000590060 COL17A1Q9UMD9 1497 aaPredicted RBP27.59■■■□□ 2.01
POLR2E-207ENST00000590060 GGT6Q6P531 493 aa27.58■■■□□ 2.01
POLR2E-207ENST00000590060 TRPM2O94759 1503 aa27.57■■■□□ 2
POLR2E-207ENST00000590060 CEP152O94986 1710 aa27.56■■■□□ 2
POLR2E-207ENST00000590060 ABCC3O15438 1527 aa27.56■■■□□ 2
POLR2E-207ENST00000590060 SPHKAPQ2M3C7 1700 aa27.55■■■□□ 2
POLR2E-207ENST00000590060 WASHC2CQ9Y4E1 1318 aa27.53■■■□□ 2
POLR2E-207ENST00000590060 ZNF316A6NFI3 1004 aaPredicted RBP27.52■■■□□ 2
POLR2E-207ENST00000590060 L3MBTL2Q969R5 705 aa27.52■■■□□ 2
POLR2E-207ENST00000590060 PTPRTO14522 1441 aa27.51■■□□□ 1.99
POLR2E-207ENST00000590060 PLA2R1Q13018 1463 aa27.51■■□□□ 1.99
POLR2E-207ENST00000590060 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
POLR2E-207ENST00000590060 PPP6R1Q9UPN7 881 aa27.49■■□□□ 1.99
POLR2E-207ENST00000590060 ARHGAP31Q2M1Z3 1444 aa27.43■■□□□ 1.98
POLR2E-207ENST00000590060 NPATQ14207 1427 aa27.42■■□□□ 1.98
POLR2E-207ENST00000590060 CNTLNQ9NXG0 1405 aa27.42■■□□□ 1.98
POLR2E-207ENST00000590060 CLTCL1P53675 1640 aa27.39■■□□□ 1.98
POLR2E-207ENST00000590060 NEURL4Q96JN8 1562 aa27.39■■□□□ 1.97
POLR2E-207ENST00000590060 UHRF1BP1Q6BDS2 1440 aa27.35■■□□□ 1.97
POLR2E-207ENST00000590060 ESF1Q9H501 851 aaKnown RBP27.35■■□□□ 1.97
POLR2E-207ENST00000590060 ARID4BQ4LE39 1312 aaPredicted RBP27.34■■□□□ 1.97
POLR2E-207ENST00000590060 SPATA31E1Q6ZUB1 1445 aa27.32■■□□□ 1.96
POLR2E-207ENST00000590060 DCAF11Q8TEB1 546 aa27.31■■□□□ 1.96
POLR2E-207ENST00000590060 NOS1P29475 1434 aa27.31■■□□□ 1.96
POLR2E-207ENST00000590060 SIGLEC1Q9BZZ2 1709 aa27.3■■□□□ 1.96
POLR2E-207ENST00000590060 STAC3Q96MF2 364 aa27.3■■□□□ 1.96
POLR2E-207ENST00000590060 KIF1BO60333 1816 aa27.3■■□□□ 1.96
POLR2E-207ENST00000590060 RGL3Q3MIN7 710 aa27.29■■□□□ 1.96
POLR2E-207ENST00000590060 CLTCQ00610 1675 aaKnown RBP27.29■■□□□ 1.96
POLR2E-207ENST00000590060 ZNF326Q5BKZ1 582 aaKnown RBP27.28■■□□□ 1.96
POLR2E-207ENST00000590060 RALGAPBQ86X10 1494 aa27.27■■□□□ 1.96
POLR2E-207ENST00000590060 MLECQ14165 292 aa27.27■■□□□ 1.96
POLR2E-207ENST00000590060 PREX1Q8TCU6 1659 aa27.25■■□□□ 1.95
POLR2E-207ENST00000590060 UGGT1Q9NYU2 1555 aa27.24■■□□□ 1.95
POLR2E-207ENST00000590060 NBPF8Q3BBV2 869 aa27.24■■□□□ 1.95
POLR2E-207ENST00000590060 KDM2AQ9Y2K7 1162 aa27.24■■□□□ 1.95
POLR2E-207ENST00000590060 ADGRB3O60242 1522 aa27.24■■□□□ 1.95
POLR2E-207ENST00000590060 PRAG1Q86YV5 1406 aa27.23■■□□□ 1.95
POLR2E-207ENST00000590060 ERVK-7P63135 1459 aa27.22■■□□□ 1.95
POLR2E-207ENST00000590060 EIF4G2P78344 907 aaKnown RBP eCLIP27.22■■□□□ 1.95
POLR2E-207ENST00000590060 PIK3C2BO00750 1634 aa27.22■■□□□ 1.95
POLR2E-207ENST00000590060 SYNMO15061 1565 aa27.22■■□□□ 1.95
POLR2E-207ENST00000590060 SLC52A1Q9NWF4 448 aa27.21■■□□□ 1.95
POLR2E-207ENST00000590060 MROH2AA6NES4 1674 aa27.17■■□□□ 1.94
POLR2E-207ENST00000590060 MYOM2P54296 1465 aa27.17■■□□□ 1.94
POLR2E-207ENST00000590060 CHGAP10645 457 aaKnown RBP27.16■■□□□ 1.94
POLR2E-207ENST00000590060 DIEXFQ68CQ4 756 aaKnown RBP27.16■■□□□ 1.94
POLR2E-207ENST00000590060 SPATA31D1Q6ZQQ2 1576 aa27.16■■□□□ 1.94
POLR2E-207ENST00000590060 ROCK2O75116 1388 aaKnown RBP27.15■■□□□ 1.94
POLR2E-207ENST00000590060 TRPM1Q7Z4N2 1603 aa27.14■■□□□ 1.94
POLR2E-207ENST00000590060 CFAP65Q6ZU64 1925 aaKnown RBP27.14■■□□□ 1.93
POLR2E-207ENST00000590060 RPGRIP1LQ68CZ1 1315 aa27.14■■□□□ 1.93
POLR2E-207ENST00000590060 MADDQ8WXG6 1647 aa27.13■■□□□ 1.93
POLR2E-207ENST00000590060 ZMYM3Q14202 1370 aa27.1■■□□□ 1.93
POLR2E-207ENST00000590060 LAMC1P11047 1609 aa27.1■■□□□ 1.93
POLR2E-207ENST00000590060 HSPA5P11021 654 aaKnown RBP27.1■■□□□ 1.93
POLR2E-207ENST00000590060 CARD11Q9BXL7 1154 aa27.1■■□□□ 1.93
POLR2E-207ENST00000590060 IFT172Q9UG01 1749 aa27.1■■□□□ 1.93
POLR2E-207ENST00000590060 USP47Q96K76 1375 aa27.09■■□□□ 1.93
POLR2E-207ENST00000590060 FER1L4A9Z1Z3 1794 aa27.07■■□□□ 1.92
POLR2E-207ENST00000590060 GPRASP1Q5JY77 1395 aa27.06■■□□□ 1.92
POLR2E-207ENST00000590060 IDI1Q13907 227 aa27.04■■□□□ 1.92
POLR2E-207ENST00000590060 FBXO31Q5XUX0 539 aaPredicted RBP27.04■■□□□ 1.92
POLR2E-207ENST00000590060 STAG3Q9UJ98 1225 aa27.04■■□□□ 1.92
POLR2E-207ENST00000590060 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
POLR2E-207ENST00000590060 PPLO60437 1756 aa27.03■■□□□ 1.92
POLR2E-207ENST00000590060 TNRQ92752 1358 aa27.02■■□□□ 1.92
POLR2E-207ENST00000590060 TMEM131LA2VDJ0 1609 aa27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms