RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 NISCHQ9Y2I1 1504 aa43.94■■■■■ 4.63
POLR2E-207ENST00000590060 CCDC180Q9P1Z9 1646 aa38.55■■■■□ 3.76
POLR2E-207ENST00000590060 ZCCHC6Q5VYS8 1495 aaKnown RBP36.91■■■■□ 3.5
POLR2E-207ENST00000590060 DCAF1Q9Y4B6 1507 aa36.44■■■■□ 3.42
POLR2E-207ENST00000590060 ABCC9O60706 1549 aa36.44■■■■□ 3.42
POLR2E-207ENST00000590060 DCAF8L2P0C7V8 631 aa36.25■■■■□ 3.39
POLR2E-207ENST00000590060 MYO15BQ96JP2 1530 aa36.11■■■■□ 3.37
POLR2E-207ENST00000590060 NACADO15069 1562 aa35.93■■■■□ 3.34
POLR2E-207ENST00000590060 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
POLR2E-207ENST00000590060 SHROOM4Q9ULL8 1493 aa35.58■■■■□ 3.29
POLR2E-207ENST00000590060 SCRIBQ14160 1630 aa35.29■■■■□ 3.24
POLR2E-207ENST00000590060 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
POLR2E-207ENST00000590060 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
POLR2E-207ENST00000590060 PABPN1Q86U42 306 aaKnown RBP eCLIP34.23■■■■□ 3.07
POLR2E-207ENST00000590060 SUPT5HO00267 1087 aaKnown RBP34.15■■■■□ 3.06
POLR2E-207ENST00000590060 BAZ1AQ9NRL2 1556 aaPredicted RBP34.04■■■■□ 3.04
POLR2E-207ENST00000590060 CECR2Q9BXF3 1484 aa34.02■■■■□ 3.04
POLR2E-207ENST00000590060 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
POLR2E-207ENST00000590060 MROH2BQ7Z745 1585 aa33.86■■■■□ 3.01
POLR2E-207ENST00000590060 SMARCA4P51532 1647 aa33.85■■■■□ 3.01
POLR2E-207ENST00000590060 WIZO95785 1651 aa33.58■■■□□ 2.97
POLR2E-207ENST00000590060 EIF4G1Q04637 1599 aaKnown RBP33.48■■■□□ 2.95
POLR2E-207ENST00000590060 PEG3Q9GZU2 1588 aa33.46■■■□□ 2.95
POLR2E-207ENST00000590060 SMARCA2P51531 1590 aa33.41■■■□□ 2.94
POLR2E-207ENST00000590060 TOP2AP11388 1531 aaKnown RBP33.38■■■□□ 2.93
POLR2E-207ENST00000590060 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
POLR2E-207ENST00000590060 BAZ1BQ9UIG0 1483 aaKnown RBP33.18■■■□□ 2.9
POLR2E-207ENST00000590060 HMGXB3Q12766 1538 aa33.1■■■□□ 2.89
POLR2E-207ENST00000590060 NCAPD3P42695 1498 aa33.07■■■□□ 2.88
POLR2E-207ENST00000590060 CC2D2AQ9P2K1 1620 aa33■■■□□ 2.87
POLR2E-207ENST00000590060 CCDC88BA6NC98 1476 aa32.9■■■□□ 2.86
POLR2E-207ENST00000590060 CHIC1Q5VXU3 224 aa32.57■■■□□ 2.8
POLR2E-207ENST00000590060 CFTRP13569 1480 aa32.28■■■□□ 2.76
POLR2E-207ENST00000590060 TRIM41Q8WV44 630 aa32.23■■■□□ 2.75
POLR2E-207ENST00000590060 CADPSQ9ULU8 1353 aa32.21■■■□□ 2.75
POLR2E-207ENST00000590060 PRDM2Q13029 1718 aa32.19■■■□□ 2.74
POLR2E-207ENST00000590060 ABCC8Q09428 1581 aa32.11■■■□□ 2.73
POLR2E-207ENST00000590060 WRNQ14191 1432 aaPredicted RBP eCLIP32.07■■■□□ 2.72
POLR2E-207ENST00000590060 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
POLR2E-207ENST00000590060 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
POLR2E-207ENST00000590060 FANCD2Q9BXW9 1451 aa31.88■■■□□ 2.69
POLR2E-207ENST00000590060 SYNJ1O43426 1573 aa31.86■■■□□ 2.69
POLR2E-207ENST00000590060 NESP48681 1621 aa31.86■■■□□ 2.69
POLR2E-207ENST00000590060 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
POLR2E-207ENST00000590060 TOP2BQ02880 1626 aa31.82■■■□□ 2.69
POLR2E-207ENST00000590060 BIVM-ERCC5R4GMW8 1640 aa31.8■■■□□ 2.68
POLR2E-207ENST00000590060 CEP164Q9UPV0 1460 aa31.76■■■□□ 2.67
POLR2E-207ENST00000590060 CUX1P39880 1505 aa31.71■■■□□ 2.67
POLR2E-207ENST00000590060 EEA1Q15075 1411 aa31.64■■■□□ 2.66
POLR2E-207ENST00000590060 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
POLR2E-207ENST00000590060 KIF21AQ7Z4S6 1674 aa31.56■■■□□ 2.64
POLR2E-207ENST00000590060 FAM9AQ8IZU1 332 aaPredicted RBP31.51■■■□□ 2.63
POLR2E-207ENST00000590060 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
POLR2E-207ENST00000590060 SOGA1O94964 1423 aa31.45■■■□□ 2.63
POLR2E-207ENST00000590060 FGD5Q6ZNL6 1462 aa31.45■■■□□ 2.62
POLR2E-207ENST00000590060 URB2Q14146 1524 aaKnown RBP31.42■■■□□ 2.62
POLR2E-207ENST00000590060 ERCC6Q03468 1493 aa31.41■■■□□ 2.62
POLR2E-207ENST00000590060 MRC2Q9UBG0 1479 aa31.41■■■□□ 2.62
POLR2E-207ENST00000590060 KIF27Q86VH2 1401 aa31.32■■■□□ 2.6
POLR2E-207ENST00000590060 POLA1P09884 1462 aaPredicted RBP31.31■■■□□ 2.6
POLR2E-207ENST00000590060 CSRNP3Q8WYN3 585 aa31.29■■■□□ 2.6
POLR2E-207ENST00000590060 RUSC2Q8N2Y8 1516 aa31.28■■■□□ 2.6
POLR2E-207ENST00000590060 WDR62O43379 1518 aa31.24■■■□□ 2.59
POLR2E-207ENST00000590060 CUX2O14529 1486 aa31.22■■■□□ 2.59
POLR2E-207ENST00000590060 LOC105371045A0A1W2PR82 267 aa31.2■■■□□ 2.59
POLR2E-207ENST00000590060 ABCA10Q8WWZ4 1543 aa31.19■■■□□ 2.58
POLR2E-207ENST00000590060 KIF21BO75037 1637 aa31.15■■■□□ 2.58
POLR2E-207ENST00000590060 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
POLR2E-207ENST00000590060 GOLGA3Q08378 1498 aa31.13■■■□□ 2.57
POLR2E-207ENST00000590060 RAD54L2Q9Y4B4 1467 aa31.13■■■□□ 2.57
POLR2E-207ENST00000590060 WDR97A6NE52 1622 aa31.09■■■□□ 2.57
POLR2E-207ENST00000590060 IFT140Q96RY7 1462 aa31.01■■■□□ 2.56
POLR2E-207ENST00000590060 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
POLR2E-207ENST00000590060 EHMT2Q96KQ7 1210 aa31■■■□□ 2.55
POLR2E-207ENST00000590060 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
POLR2E-207ENST00000590060 PRXQ9BXM0 1461 aa30.96■■■□□ 2.55
POLR2E-207ENST00000590060 ABCA5Q8WWZ7 1642 aa30.95■■■□□ 2.55
POLR2E-207ENST00000590060 TNIKQ9UKE5 1360 aa30.92■■■□□ 2.54
POLR2E-207ENST00000590060 IGF1RP08069 1367 aa30.91■■■□□ 2.54
POLR2E-207ENST00000590060 UBTFP17480 764 aaKnown RBP30.9■■■□□ 2.54
POLR2E-207ENST00000590060 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.54
POLR2E-207ENST00000590060 CUL7Q14999 1698 aa30.89■■■□□ 2.54
POLR2E-207ENST00000590060 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
POLR2E-207ENST00000590060 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
POLR2E-207ENST00000590060 CARMIL1Q5VZK9 1371 aa30.82■■■□□ 2.52
POLR2E-207ENST00000590060 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
POLR2E-207ENST00000590060 CEP162Q5TB80 1403 aa30.73■■■□□ 2.51
POLR2E-207ENST00000590060 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
POLR2E-207ENST00000590060 EIF4G3O43432 1585 aaKnown RBP30.69■■■□□ 2.5
POLR2E-207ENST00000590060 AQRO60306 1485 aaKnown RBP eCLIP30.68■■■□□ 2.52e-7■■■■□ 22.8
POLR2E-207ENST00000590060 ZNF608Q9ULD9 1512 aaPredicted RBP30.67■■■□□ 2.5
POLR2E-207ENST00000590060 FHAD1B1AJZ9 1412 aa30.6■■■□□ 2.49
POLR2E-207ENST00000590060 ADAMTS12P58397 1594 aa30.6■■■□□ 2.49
POLR2E-207ENST00000590060 CLIP1P30622 1438 aa30.56■■■□□ 2.48
POLR2E-207ENST00000590060 MAGI1Q96QZ7 1491 aaPredicted RBP30.52■■■□□ 2.48
POLR2E-207ENST00000590060 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
POLR2E-207ENST00000590060 CTTNBP2Q8WZ74 1663 aa30.46■■■□□ 2.47
POLR2E-207ENST00000590060 SYNJ2O15056 1496 aa30.37■■■□□ 2.45
POLR2E-207ENST00000590060 RANGAP1P46060 587 aaPredicted RBP30.34■■■□□ 2.45
POLR2E-207ENST00000590060 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms