RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 FAM50AQ14320 339 aaKnown RBP31.06■■■□□ 2.56
TRAPPC6A-203ENST00000587818 TCOF1Q13428 1488 aaKnown RBP31.06■■■□□ 2.56
TRAPPC6A-203ENST00000587818 DAPK1P53355 1430 aa31.04■■■□□ 2.56
TRAPPC6A-203ENST00000587818 STRCQ7RTU9 1775 aa31.02■■■□□ 2.56
TRAPPC6A-203ENST00000587818 KIF15Q9NS87 1388 aa30.99■■■□□ 2.55
TRAPPC6A-203ENST00000587818 DNMT1P26358 1616 aaKnown RBP30.98■■■□□ 2.55
TRAPPC6A-203ENST00000587818 CROCC2H7BZ55 1655 aa30.98■■■□□ 2.55
TRAPPC6A-203ENST00000587818 KDM5DQ9BY66 1539 aa30.97■■■□□ 2.55
TRAPPC6A-203ENST00000587818 DUOX2Q9NRD8 1548 aa30.96■■■□□ 2.55
TRAPPC6A-203ENST00000587818 SHANK2Q9UPX8 1470 aa30.95■■■□□ 2.55
TRAPPC6A-203ENST00000587818 DMRT2Q9Y5R5 561 aa30.95■■■□□ 2.55
TRAPPC6A-203ENST00000587818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.93■■■□□ 2.54
TRAPPC6A-203ENST00000587818 NCKAP5LQ9HCH0 1330 aa30.92■■■□□ 2.54
TRAPPC6A-203ENST00000587818 RNF17Q9BXT8 1623 aaKnown RBP30.91■■■□□ 2.54
TRAPPC6A-203ENST00000587818 CAMSAP1Q5T5Y3 1602 aa30.91■■■□□ 2.54
TRAPPC6A-203ENST00000587818 MYO3AQ8NEV4 1616 aa30.91■■■□□ 2.54
TRAPPC6A-203ENST00000587818 ANKRD30AQ9BXX3 1397 aa30.91■■■□□ 2.54
TRAPPC6A-203ENST00000587818 EIF2AK4Q9P2K8 1649 aaKnown RBP30.9■■■□□ 2.54
TRAPPC6A-203ENST00000587818 TNRQ92752 1358 aa30.9■■■□□ 2.54
TRAPPC6A-203ENST00000587818 PZPP20742 1482 aa30.89■■■□□ 2.54
TRAPPC6A-203ENST00000587818 NCOA1Q15788 1441 aa30.88■■■□□ 2.53
TRAPPC6A-203ENST00000587818 ABCC3O15438 1527 aa30.87■■■□□ 2.53
TRAPPC6A-203ENST00000587818 FAM135AQ9P2D6 1515 aa30.87■■■□□ 2.53
TRAPPC6A-203ENST00000587818 MROH1Q8NDA8 1641 aa30.87■■■□□ 2.53
TRAPPC6A-203ENST00000587818 CEP170BQ9Y4F5 1589 aaPredicted RBP30.86■■■□□ 2.53
TRAPPC6A-203ENST00000587818 CFAP65Q6ZU64 1925 aaKnown RBP30.86■■■□□ 2.53
TRAPPC6A-203ENST00000587818 ERBINQ96RT1 1412 aa30.83■■■□□ 2.53
TRAPPC6A-203ENST00000587818 CERKQ8TCT0 537 aa30.83■■■□□ 2.53
TRAPPC6A-203ENST00000587818 FBXO41Q8TF61 875 aa30.83■■■□□ 2.53
TRAPPC6A-203ENST00000587818 CEP152O94986 1710 aa30.82■■■□□ 2.52
TRAPPC6A-203ENST00000587818 A2ML1A8K2U0 1454 aa30.82■■■□□ 2.52
TRAPPC6A-203ENST00000587818 PTPRTO14522 1441 aa30.81■■■□□ 2.52
TRAPPC6A-203ENST00000587818 ZNF142P52746 1687 aaPredicted RBP30.81■■■□□ 2.52
TRAPPC6A-203ENST00000587818 ITGAEP38570 1179 aa30.8■■■□□ 2.52
TRAPPC6A-203ENST00000587818 ZC3H13Q5T200 1668 aaKnown RBP30.77■■■□□ 2.52
TRAPPC6A-203ENST00000587818 ADGRL2O95490 1459 aa30.76■■■□□ 2.51
TRAPPC6A-203ENST00000587818 PKD2Q13563 968 aa30.75■■■□□ 2.51
TRAPPC6A-203ENST00000587818 PLA2R1Q13018 1463 aa30.72■■■□□ 2.51
TRAPPC6A-203ENST00000587818 KANK1Q14678 1352 aa30.72■■■□□ 2.51
TRAPPC6A-203ENST00000587818 THEMISQ8N1K5 641 aaPredicted RBP30.71■■■□□ 2.51
TRAPPC6A-203ENST00000587818 PRDM15P57071 1507 aaPredicted RBP30.71■■■□□ 2.51
TRAPPC6A-203ENST00000587818 ERVK-7P63135 1459 aa30.7■■■□□ 2.51
TRAPPC6A-203ENST00000587818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.7■■■□□ 2.51
TRAPPC6A-203ENST00000587818 SPATA31D1Q6ZQQ2 1576 aa30.68■■■□□ 2.5
TRAPPC6A-203ENST00000587818 ANKRD50Q9ULJ7 1429 aa30.68■■■□□ 2.5
TRAPPC6A-203ENST00000587818 DEPDC5O75140 1603 aa30.68■■■□□ 2.5
TRAPPC6A-203ENST00000587818 NLRP1Q9C000 1473 aa30.68■■■□□ 2.5
TRAPPC6A-203ENST00000587818 UGGT1Q9NYU2 1555 aa30.65■■■□□ 2.5
TRAPPC6A-203ENST00000587818 ANKLE2Q86XL3 938 aa30.64■■■□□ 2.5
TRAPPC6A-203ENST00000587818 ARHGAP31Q2M1Z3 1444 aa30.64■■■□□ 2.49
TRAPPC6A-203ENST00000587818 ZNF335Q9H4Z2 1342 aaPredicted RBP30.63■■■□□ 2.49
TRAPPC6A-203ENST00000587818 LTBP4Q8N2S1 1624 aa30.59■■■□□ 2.49
TRAPPC6A-203ENST00000587818 VWDEQ8N2E2 1590 aa30.59■■■□□ 2.49
TRAPPC6A-203ENST00000587818 ROCK1Q13464 1354 aa30.57■■■□□ 2.48
TRAPPC6A-203ENST00000587818 LMTK2Q8IWU2 1503 aa30.57■■■□□ 2.48
TRAPPC6A-203ENST00000587818 NEURL4Q96JN8 1562 aa30.54■■■□□ 2.48
TRAPPC6A-203ENST00000587818 POLR1AO95602 1720 aaPredicted RBP30.53■■■□□ 2.48
TRAPPC6A-203ENST00000587818 IDI1Q13907 227 aa30.53■■■□□ 2.48
TRAPPC6A-203ENST00000587818 STAG3Q9UJ98 1225 aa30.51■■■□□ 2.47
TRAPPC6A-203ENST00000587818 UBR1Q8IWV7 1749 aa30.5■■■□□ 2.47
TRAPPC6A-203ENST00000587818 RRBP1Q9P2E9 1410 aaKnown RBP30.48■■■□□ 2.47
TRAPPC6A-203ENST00000587818 NPHP4O75161 1426 aaPredicted RBP30.47■■■□□ 2.47
TRAPPC6A-203ENST00000587818 LTKP29376 864 aa30.47■■■□□ 2.47
TRAPPC6A-203ENST00000587818 TXNDC2Q86VQ3 553 aa30.47■■■□□ 2.47
TRAPPC6A-203ENST00000587818 EFCAB6Q5THR3 1501 aa30.47■■■□□ 2.47
TRAPPC6A-203ENST00000587818 PIK3C2BO00750 1634 aa30.45■■■□□ 2.47
TRAPPC6A-203ENST00000587818 NOS1P29475 1434 aa30.44■■■□□ 2.46
TRAPPC6A-203ENST00000587818 SYNMO15061 1565 aa30.43■■■□□ 2.46
TRAPPC6A-203ENST00000587818 NUP155O75694 1391 aa30.42■■■□□ 2.46
TRAPPC6A-203ENST00000587818 UNC13BO14795 1591 aa30.42■■■□□ 2.46
TRAPPC6A-203ENST00000587818 MED14O60244 1454 aa30.42■■■□□ 2.46
TRAPPC6A-203ENST00000587818 TET3O43151 1660 aa30.39■■■□□ 2.46
TRAPPC6A-203ENST00000587818 SLC52A1Q9NWF4 448 aa30.38■■■□□ 2.45
TRAPPC6A-203ENST00000587818 EID1Q9Y6B2 187 aa30.38■■■□□ 2.45
TRAPPC6A-203ENST00000587818 ARHGAP23Q9P227 1491 aa30.37■■■□□ 2.45
TRAPPC6A-203ENST00000587818 IQGAP1P46940 1657 aa30.36■■■□□ 2.45
TRAPPC6A-203ENST00000587818 TMEM2Q9UHN6 1383 aa30.36■■■□□ 2.45
TRAPPC6A-203ENST00000587818 SCAF11Q99590 1463 aaKnown RBP30.36■■■□□ 2.45
TRAPPC6A-203ENST00000587818 SLIT1O75093 1534 aa30.34■■■□□ 2.45
TRAPPC6A-203ENST00000587818 RPRD2Q5VT52 1461 aaKnown RBP30.34■■■□□ 2.45
TRAPPC6A-203ENST00000587818 GCC2Q8IWJ2 1684 aa30.33■■■□□ 2.45
TRAPPC6A-203ENST00000587818 UBAP1LF5GYI3 381 aa30.32■■■□□ 2.44
TRAPPC6A-203ENST00000587818 CHGAP10645 457 aaKnown RBP30.32■■■□□ 2.44
TRAPPC6A-203ENST00000587818 SENP3Q9H4L4 574 aaPredicted RBP30.32■■■□□ 2.44
TRAPPC6A-203ENST00000587818 E9PCH4 1651 aa30.32■■■□□ 2.44
TRAPPC6A-203ENST00000587818 IQGAP3Q86VI3 1631 aa30.32■■■□□ 2.44
TRAPPC6A-203ENST00000587818 IQSEC2Q5JU85 1478 aa30.31■■■□□ 2.44
TRAPPC6A-203ENST00000587818 NAIPQ13075 1403 aa30.29■■■□□ 2.44
TRAPPC6A-203ENST00000587818 ADGRB3O60242 1522 aa30.25■■■□□ 2.43
TRAPPC6A-203ENST00000587818 MYO5BQ9ULV0 1848 aa30.24■■■□□ 2.43
TRAPPC6A-203ENST00000587818 CPS1P31327 1500 aa30.24■■■□□ 2.43
TRAPPC6A-203ENST00000587818 KDM5AP29375 1690 aaKnown RBP30.23■■■□□ 2.43
TRAPPC6A-203ENST00000587818 STRCP1A6NGW2 1772 aa30.23■■■□□ 2.43
TRAPPC6A-203ENST00000587818 TRIM52Q96A61 297 aa30.23■■■□□ 2.43
TRAPPC6A-203ENST00000587818 BCANQ96GW7 911 aa30.23■■■□□ 2.43
TRAPPC6A-203ENST00000587818 SLC26A8Q96RN1 970 aa30.23■■■□□ 2.43
TRAPPC6A-203ENST00000587818 NUTM2DQ5VT03 806 aaPredicted RBP30.2■■■□□ 2.43
TRAPPC6A-203ENST00000587818 TMEM131LA2VDJ0 1609 aa30.17■■■□□ 2.42
TRAPPC6A-203ENST00000587818 RIMS2Q9UQ26 1411 aa30.16■■■□□ 2.42
TRAPPC6A-203ENST00000587818 PIP4K2BP78356 416 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms