RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 NISCHQ9Y2I1 1504 aa49.19■■■■■ 5.47
TRAPPC6A-203ENST00000587818 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
TRAPPC6A-203ENST00000587818 ABCC9O60706 1549 aa43.49■■■■■ 4.55
TRAPPC6A-203ENST00000587818 DCAF8L2P0C7V8 631 aa41.6■■■■■ 4.25
TRAPPC6A-203ENST00000587818 RB1CC1Q8TDY2 1594 aa41.48■■■■■ 4.23
TRAPPC6A-203ENST00000587818 NACADO15069 1562 aa41.31■■■■■ 4.2
TRAPPC6A-203ENST00000587818 MYO15BQ96JP2 1530 aa40.83■■■■■ 4.13
TRAPPC6A-203ENST00000587818 ZCCHC6Q5VYS8 1495 aaKnown RBP40.83■■■■■ 4.13
TRAPPC6A-203ENST00000587818 PABPN1Q86U42 306 aaKnown RBP eCLIP40.7■■■■■ 4.11
TRAPPC6A-203ENST00000587818 UNC13AQ9UPW8 1703 aa40.6■■■■■ 4.09
TRAPPC6A-203ENST00000587818 DCAF1Q9Y4B6 1507 aa40.55■■■■■ 4.08
TRAPPC6A-203ENST00000587818 DNAJC5BQ9UF47 199 aa40.44■■■■■ 4.06
TRAPPC6A-203ENST00000587818 BICRAQ9NZM4 1560 aa40.31■■■■■ 4.04
TRAPPC6A-203ENST00000587818 SCRIBQ14160 1630 aa40.09■■■■■ 4.01
TRAPPC6A-203ENST00000587818 SHROOM4Q9ULL8 1493 aa39.61■■■■□ 3.93
TRAPPC6A-203ENST00000587818 EIF4G1Q04637 1599 aaKnown RBP39.25■■■■□ 3.87
TRAPPC6A-203ENST00000587818 CC2D2AQ9P2K1 1620 aa39.24■■■■□ 3.87
TRAPPC6A-203ENST00000587818 CECR2Q9BXF3 1484 aa39.06■■■■□ 3.84
TRAPPC6A-203ENST00000587818 SMARCA4P51532 1647 aa38.23■■■■□ 3.71
TRAPPC6A-203ENST00000587818 NCAPD3P42695 1498 aa38.18■■■■□ 3.7
TRAPPC6A-203ENST00000587818 ATAD2BQ9ULI0 1458 aa38.17■■■■□ 3.7
TRAPPC6A-203ENST00000587818 BAZ1AQ9NRL2 1556 aaPredicted RBP38.1■■■■□ 3.69
TRAPPC6A-203ENST00000587818 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
TRAPPC6A-203ENST00000587818 MROH2BQ7Z745 1585 aa37.97■■■■□ 3.67
TRAPPC6A-203ENST00000587818 HMGXB3Q12766 1538 aa37.87■■■■□ 3.65
TRAPPC6A-203ENST00000587818 BAZ1BQ9UIG0 1483 aaKnown RBP37.82■■■■□ 3.64
TRAPPC6A-203ENST00000587818 PEG3Q9GZU2 1588 aa37.77■■■■□ 3.64
TRAPPC6A-203ENST00000587818 WIZO95785 1651 aa37.56■■■■□ 3.6
TRAPPC6A-203ENST00000587818 NESP48681 1621 aa37.53■■■■□ 3.6
TRAPPC6A-203ENST00000587818 ERCC6Q03468 1493 aa37.45■■■■□ 3.59
TRAPPC6A-203ENST00000587818 RSF1Q96T23 1441 aaPredicted RBP37.38■■■■□ 3.57
TRAPPC6A-203ENST00000587818 LAMC3Q9Y6N6 1575 aa37.19■■■■□ 3.54
TRAPPC6A-203ENST00000587818 CADPSQ9ULU8 1353 aa37.1■■■■□ 3.53
TRAPPC6A-203ENST00000587818 CUX2O14529 1486 aa37.09■■■■□ 3.53
TRAPPC6A-203ENST00000587818 PDS5BQ9NTI5 1447 aa37.02■■■■□ 3.52
TRAPPC6A-203ENST00000587818 TOP2AP11388 1531 aaKnown RBP37.01■■■■□ 3.52
TRAPPC6A-203ENST00000587818 KIF21AQ7Z4S6 1674 aa36.97■■■■□ 3.51
TRAPPC6A-203ENST00000587818 THOC2Q8NI27 1593 aaKnown RBP36.88■■■■□ 3.49
TRAPPC6A-203ENST00000587818 CFTRP13569 1480 aa36.74■■■■□ 3.47
TRAPPC6A-203ENST00000587818 CCDC88BA6NC98 1476 aa36.7■■■■□ 3.47
TRAPPC6A-203ENST00000587818 FANCD2Q9BXW9 1451 aa36.66■■■■□ 3.46
TRAPPC6A-203ENST00000587818 MRC2Q9UBG0 1479 aa36.65■■■■□ 3.46
TRAPPC6A-203ENST00000587818 DNAJC5Q9H3Z4 198 aa36.63■■■■□ 3.45
TRAPPC6A-203ENST00000587818 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
TRAPPC6A-203ENST00000587818 WDR62O43379 1518 aa36.5■■■■□ 3.43
TRAPPC6A-203ENST00000587818 SUPT5HO00267 1087 aaKnown RBP36.35■■■■□ 3.41
TRAPPC6A-203ENST00000587818 PRDM2Q13029 1718 aa36.34■■■■□ 3.41
TRAPPC6A-203ENST00000587818 URB2Q14146 1524 aaKnown RBP36.34■■■■□ 3.41
TRAPPC6A-203ENST00000587818 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
TRAPPC6A-203ENST00000587818 ABCC8Q09428 1581 aa35.92■■■■□ 3.34
TRAPPC6A-203ENST00000587818 DNMBPQ6XZF7 1577 aa35.89■■■■□ 3.34
TRAPPC6A-203ENST00000587818 IFT140Q96RY7 1462 aa35.86■■■■□ 3.33
TRAPPC6A-203ENST00000587818 ZNF608Q9ULD9 1512 aaPredicted RBP35.84■■■■□ 3.33
TRAPPC6A-203ENST00000587818 POLA1P09884 1462 aaPredicted RBP35.68■■■■□ 3.3
TRAPPC6A-203ENST00000587818 OSCARQ8IYS5 282 aa35.67■■■■□ 3.3
TRAPPC6A-203ENST00000587818 RAD54L2Q9Y4B4 1467 aa35.65■■■■□ 3.3
TRAPPC6A-203ENST00000587818 TARBP1Q13395 1621 aaKnown RBP35.64■■■■□ 3.3
TRAPPC6A-203ENST00000587818 AQRO60306 1485 aaKnown RBP eCLIP35.62■■■■□ 3.298e-14■■■■■ 85
TRAPPC6A-203ENST00000587818 CUX1P39880 1505 aa35.62■■■■□ 3.29
TRAPPC6A-203ENST00000587818 SOGA1O94964 1423 aa35.6■■■■□ 3.29
TRAPPC6A-203ENST00000587818 EIF4G3O43432 1585 aaKnown RBP35.56■■■■□ 3.28
TRAPPC6A-203ENST00000587818 FGD5Q6ZNL6 1462 aa35.56■■■■□ 3.28
TRAPPC6A-203ENST00000587818 TDRD9Q8NDG6 1382 aaKnown RBP35.51■■■■□ 3.28
TRAPPC6A-203ENST00000587818 FBLN2P98095 1184 aa35.37■■■■□ 3.25
TRAPPC6A-203ENST00000587818 TRIM41Q8WV44 630 aa35.37■■■■□ 3.25
TRAPPC6A-203ENST00000587818 CHD1O14646 1710 aa35.25■■■■□ 3.23
TRAPPC6A-203ENST00000587818 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
TRAPPC6A-203ENST00000587818 SNAPC4Q5SXM2 1469 aa35.2■■■■□ 3.23
TRAPPC6A-203ENST00000587818 WDR97A6NE52 1622 aa35.18■■■■□ 3.22
TRAPPC6A-203ENST00000587818 SYNJ1O43426 1573 aa35.17■■■■□ 3.22
TRAPPC6A-203ENST00000587818 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
TRAPPC6A-203ENST00000587818 ABCA10Q8WWZ4 1543 aa35.14■■■■□ 3.22
TRAPPC6A-203ENST00000587818 GAPVD1Q14C86 1478 aa35.14■■■■□ 3.22
TRAPPC6A-203ENST00000587818 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
TRAPPC6A-203ENST00000587818 CHMP7Q8WUX9 453 aaPredicted RBP35.13■■■■□ 3.21
TRAPPC6A-203ENST00000587818 BIVM-ERCC5R4GMW8 1640 aa35.12■■■■□ 3.21
TRAPPC6A-203ENST00000587818 RIMBP3CA6NJZ7 1639 aa35.06■■■■□ 3.2
TRAPPC6A-203ENST00000587818 RIMBP3BA6NNM3 1639 aa35.06■■■■□ 3.2
TRAPPC6A-203ENST00000587818 RIMBP3Q9UFD9 1639 aa35.06■■■■□ 3.2
TRAPPC6A-203ENST00000587818 MAGI1Q96QZ7 1491 aaPredicted RBP35.05■■■■□ 3.2
TRAPPC6A-203ENST00000587818 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
TRAPPC6A-203ENST00000587818 ABCA5Q8WWZ7 1642 aa35.01■■■■□ 3.19
TRAPPC6A-203ENST00000587818 ARHGEF11O15085 1522 aa34.99■■■■□ 3.19
TRAPPC6A-203ENST00000587818 SYNJ2O15056 1496 aa34.96■■■■□ 3.19
TRAPPC6A-203ENST00000587818 CYB5RLQ6IPT4 315 aa34.88■■■■□ 3.17
TRAPPC6A-203ENST00000587818 CLASP1Q7Z460 1538 aa34.81■■■■□ 3.16
TRAPPC6A-203ENST00000587818 ADAMTS12P58397 1594 aa34.71■■■■□ 3.15
TRAPPC6A-203ENST00000587818 GRIN2AQ12879 1464 aa34.7■■■■□ 3.15
TRAPPC6A-203ENST00000587818 ARAP1Q96P48 1450 aa34.7■■■■□ 3.15
TRAPPC6A-203ENST00000587818 FHAD1B1AJZ9 1412 aa34.69■■■■□ 3.14
TRAPPC6A-203ENST00000587818 ERICH3Q5RHP9 1530 aa34.67■■■■□ 3.14
TRAPPC6A-203ENST00000587818 CEP170Q5SW79 1584 aa34.57■■■■□ 3.12
TRAPPC6A-203ENST00000587818 NUP160Q12769 1436 aa34.55■■■■□ 3.12
TRAPPC6A-203ENST00000587818 IGF1RP08069 1367 aa34.51■■■■□ 3.12
TRAPPC6A-203ENST00000587818 KIF27Q86VH2 1401 aa34.51■■■■□ 3.12
TRAPPC6A-203ENST00000587818 ERCC6L2Q5T890 1561 aa34.43■■■■□ 3.1
TRAPPC6A-203ENST00000587818 JPH4Q96JJ6 628 aa34.35■■■■□ 3.09
TRAPPC6A-203ENST00000587818 TRHP20396 242 aaPredicted RBP34.32■■■■□ 3.08
TRAPPC6A-203ENST00000587818 SHROOM2Q13796 1616 aa34.3■■■■□ 3.08
TRAPPC6A-203ENST00000587818 CARMIL1Q5VZK9 1371 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms