RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 GGT6Q6P531 493 aa25.82■■□□□ 1.72
VAT1-204ENST00000587147 C3P01024 1663 aa25.81■■□□□ 1.72
VAT1-204ENST00000587147 KDM5DQ9BY66 1539 aa25.81■■□□□ 1.72
VAT1-204ENST00000587147 CLTCQ00610 1675 aaKnown RBP25.8■■□□□ 1.72
VAT1-204ENST00000587147 ZC3H13Q5T200 1668 aaKnown RBP25.8■■□□□ 1.72
VAT1-204ENST00000587147 RRP7BPQ9NSQ0 103 aa25.79■■□□□ 1.72
VAT1-204ENST00000587147 PTPRKQ15262 1439 aa25.79■■□□□ 1.72
VAT1-204ENST00000587147 DEPDC5O75140 1603 aa25.78■■□□□ 1.72
VAT1-204ENST00000587147 CHIC2Q9UKJ5 165 aa25.78■■□□□ 1.72
VAT1-204ENST00000587147 SETD1BQ9UPS6 1966 aaKnown RBP25.77■■□□□ 1.72
VAT1-204ENST00000587147 PRDM15P57071 1507 aaPredicted RBP25.77■■□□□ 1.72
VAT1-204ENST00000587147 ZMYM3Q14202 1370 aa25.76■■□□□ 1.71
VAT1-204ENST00000587147 NPATQ14207 1427 aa25.76■■□□□ 1.71
VAT1-204ENST00000587147 MROH1Q8NDA8 1641 aa25.76■■□□□ 1.71
VAT1-204ENST00000587147 ANKRD50Q9ULJ7 1429 aa25.73■■□□□ 1.71
VAT1-204ENST00000587147 PREX1Q8TCU6 1659 aa25.73■■□□□ 1.71
VAT1-204ENST00000587147 WASHC2CQ9Y4E1 1318 aa25.71■■□□□ 1.71
VAT1-204ENST00000587147 ABCC3O15438 1527 aa25.7■■□□□ 1.7
VAT1-204ENST00000587147 PZPP20742 1482 aa25.68■■□□□ 1.7
VAT1-204ENST00000587147 CEBPAP49715 358 aaPredicted RBP25.68■■□□□ 1.7
VAT1-204ENST00000587147 LMTK3Q96Q04 1460 aa25.67■■□□□ 1.7
VAT1-204ENST00000587147 VWDEQ8N2E2 1590 aa25.67■■□□□ 1.7
VAT1-204ENST00000587147 KANK1Q14678 1352 aa25.67■■□□□ 1.7
VAT1-204ENST00000587147 LMTK2Q8IWU2 1503 aa25.65■■□□□ 1.7
VAT1-204ENST00000587147 UHRF1BP1Q6BDS2 1440 aa25.63■■□□□ 1.69
VAT1-204ENST00000587147 CAMSAP1Q5T5Y3 1602 aa25.63■■□□□ 1.69
VAT1-204ENST00000587147 ARHGAP31Q2M1Z3 1444 aa25.63■■□□□ 1.69
VAT1-204ENST00000587147 UNC13BO14795 1591 aa25.62■■□□□ 1.69
VAT1-204ENST00000587147 ITGAEP38570 1179 aa25.62■■□□□ 1.69
VAT1-204ENST00000587147 CEP152O94986 1710 aa25.62■■□□□ 1.69
VAT1-204ENST00000587147 PLPPR3Q6T4P5 718 aa25.6■■□□□ 1.69
VAT1-204ENST00000587147 GCC2Q8IWJ2 1684 aa25.6■■□□□ 1.69
VAT1-204ENST00000587147 HFM1A2PYH4 1435 aa25.57■■□□□ 1.68
VAT1-204ENST00000587147 ZNF142P52746 1687 aaPredicted RBP25.57■■□□□ 1.68
VAT1-204ENST00000587147 SPATA31D1Q6ZQQ2 1576 aa25.56■■□□□ 1.68
VAT1-204ENST00000587147 MYO3AQ8NEV4 1616 aa25.55■■□□□ 1.68
VAT1-204ENST00000587147 NAIPQ13075 1403 aa25.55■■□□□ 1.68
VAT1-204ENST00000587147 EFCAB6Q5THR3 1501 aa25.53■■□□□ 1.68
VAT1-204ENST00000587147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.52■■□□□ 1.68
VAT1-204ENST00000587147 TNRQ92752 1358 aa25.52■■□□□ 1.68
VAT1-204ENST00000587147 IQGAP3Q86VI3 1631 aa25.52■■□□□ 1.68
VAT1-204ENST00000587147 TET3O43151 1660 aa25.52■■□□□ 1.68
VAT1-204ENST00000587147 ERVK-7P63135 1459 aa25.51■■□□□ 1.67
VAT1-204ENST00000587147 RPRD2Q5VT52 1461 aaKnown RBP25.51■■□□□ 1.67
VAT1-204ENST00000587147 NLRP1Q9C000 1473 aa25.51■■□□□ 1.67
VAT1-204ENST00000587147 CEP170BQ9Y4F5 1589 aaPredicted RBP25.5■■□□□ 1.67
VAT1-204ENST00000587147 A2ML1A8K2U0 1454 aa25.48■■□□□ 1.67
VAT1-204ENST00000587147 ACIN1Q9UKV3 1341 aaKnown RBP25.46■■□□□ 1.67
VAT1-204ENST00000587147 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
VAT1-204ENST00000587147 NUP155O75694 1391 aa25.43■■□□□ 1.66
VAT1-204ENST00000587147 PLA2R1Q13018 1463 aa25.41■■□□□ 1.66
VAT1-204ENST00000587147 NOS1P29475 1434 aa25.4■■□□□ 1.66
VAT1-204ENST00000587147 HSPA2P54652 639 aa25.4■■□□□ 1.66
VAT1-204ENST00000587147 KDM5AP29375 1690 aaKnown RBP25.38■■□□□ 1.65
VAT1-204ENST00000587147 CFAP65Q6ZU64 1925 aaKnown RBP25.37■■□□□ 1.65
VAT1-204ENST00000587147 E9PCH4 1651 aa25.36■■□□□ 1.65
VAT1-204ENST00000587147 UGGT1Q9NYU2 1555 aa25.36■■□□□ 1.65
VAT1-204ENST00000587147 STRCQ7RTU9 1775 aa25.35■■□□□ 1.65
VAT1-204ENST00000587147 DMRT2Q9Y5R5 561 aa25.34■■□□□ 1.65
VAT1-204ENST00000587147 SYNMO15061 1565 aa25.33■■□□□ 1.65
VAT1-204ENST00000587147 THEMISQ8N1K5 641 aaPredicted RBP25.33■■□□□ 1.65
VAT1-204ENST00000587147 SLC52A1Q9NWF4 448 aa25.33■■□□□ 1.65
VAT1-204ENST00000587147 SETD5Q9C0A6 1442 aa25.31■■□□□ 1.64
VAT1-204ENST00000587147 UBR1Q8IWV7 1749 aa25.31■■□□□ 1.64
VAT1-204ENST00000587147 PKD2Q13563 968 aa25.3■■□□□ 1.64
VAT1-204ENST00000587147 PTPRTO14522 1441 aa25.29■■□□□ 1.64
VAT1-204ENST00000587147 PIK3C2BO00750 1634 aa25.27■■□□□ 1.64
VAT1-204ENST00000587147 POLR1AO95602 1720 aaPredicted RBP25.25■■□□□ 1.63
VAT1-204ENST00000587147 SPHKAPQ2M3C7 1700 aa25.24■■□□□ 1.63
VAT1-204ENST00000587147 ADGRB3O60242 1522 aa25.23■■□□□ 1.63
VAT1-204ENST00000587147 SLIT1O75093 1534 aa25.23■■□□□ 1.63
VAT1-204ENST00000587147 HRCP23327 699 aa25.23■■□□□ 1.63
VAT1-204ENST00000587147 TRIM52Q96A61 297 aa25.23■■□□□ 1.63
VAT1-204ENST00000587147 IDI1Q13907 227 aa25.22■■□□□ 1.63
VAT1-204ENST00000587147 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
VAT1-204ENST00000587147 MED14O60244 1454 aa25.2■■□□□ 1.62
VAT1-204ENST00000587147 ANKLE2Q86XL3 938 aa25.19■■□□□ 1.62
VAT1-204ENST00000587147 RAB3GAP2Q9H2M9 1393 aa25.18■■□□□ 1.62
VAT1-204ENST00000587147 TRPM2O94759 1503 aa25.18■■□□□ 1.62
VAT1-204ENST00000587147 SLC4A1APQ9BWU0 796 aaKnown RBP25.18■■□□□ 1.62
VAT1-204ENST00000587147 NEURL4Q96JN8 1562 aa25.17■■□□□ 1.62
VAT1-204ENST00000587147 STAG3Q9UJ98 1225 aa25.16■■□□□ 1.62
VAT1-204ENST00000587147 TMEM131LA2VDJ0 1609 aa25.15■■□□□ 1.62
VAT1-204ENST00000587147 TMEM2Q9UHN6 1383 aa25.15■■□□□ 1.62
VAT1-204ENST00000587147 NCKAP5LQ9HCH0 1330 aa25.14■■□□□ 1.62
VAT1-204ENST00000587147 SCAF11Q99590 1463 aaKnown RBP25.13■■□□□ 1.61
VAT1-204ENST00000587147 MPHOSPH9Q99550 1183 aa25.1■■□□□ 1.61
VAT1-204ENST00000587147 EID1Q9Y6B2 187 aa25.1■■□□□ 1.61
VAT1-204ENST00000587147 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
VAT1-204ENST00000587147 NPHP4O75161 1426 aaPredicted RBP25.09■■□□□ 1.61
VAT1-204ENST00000587147 MYO5BQ9ULV0 1848 aa25.07■■□□□ 1.6
VAT1-204ENST00000587147 HDGFP51858 240 aaKnown RBP25.07■■□□□ 1.6
VAT1-204ENST00000587147 CLTCL1P53675 1640 aa25.06■■□□□ 1.6
VAT1-204ENST00000587147 ZFYVE9O95405 1425 aa25.05■■□□□ 1.6
VAT1-204ENST00000587147 KIF1BO60333 1816 aa25.05■■□□□ 1.6
VAT1-204ENST00000587147 TXNDC2Q86VQ3 553 aa25.04■■□□□ 1.6
VAT1-204ENST00000587147 LTKP29376 864 aa25.02■■□□□ 1.6
VAT1-204ENST00000587147 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.02■■□□□ 1.6
VAT1-204ENST00000587147 RIMS2Q9UQ26 1411 aa25.01■■□□□ 1.59
VAT1-204ENST00000587147 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms