RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 RAB3GAP2Q9H2M9 1393 aa18.98■□□□□ 0.63
DNMT1-208ENST00000586667 KDM5DQ9BY66 1539 aa18.98■□□□□ 0.63
DNMT1-208ENST00000586667 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
DNMT1-208ENST00000586667 IQGAP3Q86VI3 1631 aa18.95■□□□□ 0.62
DNMT1-208ENST00000586667 ADAMTSL3P82987 1691 aa18.93■□□□□ 0.62
DNMT1-208ENST00000586667 ABCC3O15438 1527 aa18.93■□□□□ 0.62
DNMT1-208ENST00000586667 FAM135AQ9P2D6 1515 aa18.93■□□□□ 0.62
DNMT1-208ENST00000586667 ZC3H13Q5T200 1668 aaKnown RBP18.92■□□□□ 0.62
DNMT1-208ENST00000586667 PZPP20742 1482 aa18.91■□□□□ 0.62
DNMT1-208ENST00000586667 CEP152O94986 1710 aa18.91■□□□□ 0.62
DNMT1-208ENST00000586667 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
DNMT1-208ENST00000586667 MADDQ8WXG6 1647 aa18.9■□□□□ 0.62
DNMT1-208ENST00000586667 KIF3BO15066 747 aa18.9■□□□□ 0.62
DNMT1-208ENST00000586667 FER1L4A9Z1Z3 1794 aa18.89■□□□□ 0.61
DNMT1-208ENST00000586667 TET3O43151 1660 aa18.87■□□□□ 0.61
DNMT1-208ENST00000586667 CLTCQ00610 1675 aaKnown RBP18.87■□□□□ 0.61
DNMT1-208ENST00000586667 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
DNMT1-208ENST00000586667 EFCAB6Q5THR3 1501 aa18.87■□□□□ 0.61
DNMT1-208ENST00000586667 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
DNMT1-208ENST00000586667 HRCP23327 699 aa18.84■□□□□ 0.61
DNMT1-208ENST00000586667 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.61
DNMT1-208ENST00000586667 RIMS1Q86UR5 1692 aaKnown RBP18.82■□□□□ 0.6
DNMT1-208ENST00000586667 NUP155O75694 1391 aa18.82■□□□□ 0.6
DNMT1-208ENST00000586667 E9PCH4 1651 aa18.82■□□□□ 0.6
DNMT1-208ENST00000586667 GGT6Q6P531 493 aa18.81■□□□□ 0.6
DNMT1-208ENST00000586667 MLECQ14165 292 aa18.8■□□□□ 0.6
DNMT1-208ENST00000586667 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
DNMT1-208ENST00000586667 C3P01024 1663 aa18.79■□□□□ 0.6
DNMT1-208ENST00000586667 NPATQ14207 1427 aa18.78■□□□□ 0.6
DNMT1-208ENST00000586667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.63e-8■■■■□ 22.3
DNMT1-208ENST00000586667 KANK1Q14678 1352 aa18.78■□□□□ 0.6
DNMT1-208ENST00000586667 ARHGAP31Q2M1Z3 1444 aa18.77■□□□□ 0.6
DNMT1-208ENST00000586667 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
DNMT1-208ENST00000586667 RPRD2Q5VT52 1461 aaKnown RBP18.75■□□□□ 0.59
DNMT1-208ENST00000586667 PREX1Q8TCU6 1659 aa18.74■□□□□ 0.59
DNMT1-208ENST00000586667 DHX57Q6P158 1386 aaKnown RBP18.74■□□□□ 0.59
DNMT1-208ENST00000586667 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
DNMT1-208ENST00000586667 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
DNMT1-208ENST00000586667 SPATA31D1Q6ZQQ2 1576 aa18.72■□□□□ 0.59
DNMT1-208ENST00000586667 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
DNMT1-208ENST00000586667 SYNMO15061 1565 aa18.72■□□□□ 0.59
DNMT1-208ENST00000586667 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
DNMT1-208ENST00000586667 PTPRMP28827 1452 aa18.71■□□□□ 0.59
DNMT1-208ENST00000586667 ERVK-7P63135 1459 aa18.71■□□□□ 0.59
DNMT1-208ENST00000586667 KDM4FA0A1W2PPD8 638 aa18.71■□□□□ 0.59
DNMT1-208ENST00000586667 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
DNMT1-208ENST00000586667 ZMYM3Q14202 1370 aa18.7■□□□□ 0.58
DNMT1-208ENST00000586667 MPHOSPH9Q99550 1183 aa18.7■□□□□ 0.58
DNMT1-208ENST00000586667 TRPM2O94759 1503 aa18.69■□□□□ 0.58
DNMT1-208ENST00000586667 PTPRTO14522 1441 aa18.69■□□□□ 0.58
DNMT1-208ENST00000586667 NOS1P29475 1434 aa18.69■□□□□ 0.58
DNMT1-208ENST00000586667 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
DNMT1-208ENST00000586667 PIK3C2BO00750 1634 aa18.67■□□□□ 0.58
DNMT1-208ENST00000586667 PKD2Q13563 968 aa18.66■□□□□ 0.58
DNMT1-208ENST00000586667 UGGT1Q9NYU2 1555 aa18.66■□□□□ 0.58
DNMT1-208ENST00000586667 CLTCL1P53675 1640 aa18.64■□□□□ 0.57
DNMT1-208ENST00000586667 MYO3AQ8NEV4 1616 aa18.64■□□□□ 0.57
DNMT1-208ENST00000586667 FOXD1Q16676 465 aa18.64■□□□□ 0.57
DNMT1-208ENST00000586667 ANKRD30BQ9BXX2 1392 aa18.63■□□□□ 0.57
DNMT1-208ENST00000586667 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
DNMT1-208ENST00000586667 CFAP65Q6ZU64 1925 aaKnown RBP18.61■□□□□ 0.57
DNMT1-208ENST00000586667 CEBPAP49715 358 aaPredicted RBP18.61■□□□□ 0.57
DNMT1-208ENST00000586667 ESF1Q9H501 851 aaKnown RBP18.61■□□□□ 0.57
DNMT1-208ENST00000586667 ZNF142P52746 1687 aaPredicted RBP18.59■□□□□ 0.57
DNMT1-208ENST00000586667 TNRQ92752 1358 aa18.58■□□□□ 0.57
DNMT1-208ENST00000586667 ADGRB3O60242 1522 aa18.56■□□□□ 0.56
DNMT1-208ENST00000586667 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
DNMT1-208ENST00000586667 KDM5AP29375 1690 aaKnown RBP18.54■□□□□ 0.56
DNMT1-208ENST00000586667 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
DNMT1-208ENST00000586667 TMEM131LA2VDJ0 1609 aa18.53■□□□□ 0.56
DNMT1-208ENST00000586667 UBR1Q8IWV7 1749 aa18.53■□□□□ 0.56
DNMT1-208ENST00000586667 NEURL4Q96JN8 1562 aa18.53■□□□□ 0.56
DNMT1-208ENST00000586667 CCDC144AA2RUR9 1427 aa18.52■□□□□ 0.56
DNMT1-208ENST00000586667 SPATA31E1Q6ZUB1 1445 aa18.51■□□□□ 0.55
DNMT1-208ENST00000586667 A2ML1A8K2U0 1454 aa18.51■□□□□ 0.55
DNMT1-208ENST00000586667 MYO5BQ9ULV0 1848 aa18.51■□□□□ 0.55
DNMT1-208ENST00000586667 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
DNMT1-208ENST00000586667 KIF1BO60333 1816 aa18.49■□□□□ 0.55
DNMT1-208ENST00000586667 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
DNMT1-208ENST00000586667 LMTK3Q96Q04 1460 aa18.48■□□□□ 0.55
DNMT1-208ENST00000586667 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
DNMT1-208ENST00000586667 IDI1Q13907 227 aa18.47■□□□□ 0.55
DNMT1-208ENST00000586667 IFT172Q9UG01 1749 aa18.46■□□□□ 0.55
DNMT1-208ENST00000586667 SLC52A1Q9NWF4 448 aa18.46■□□□□ 0.55
DNMT1-208ENST00000586667 UHRF1BP1Q6BDS2 1440 aa18.45■□□□□ 0.54
DNMT1-208ENST00000586667 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
DNMT1-208ENST00000586667 CCER1Q8TC90 406 aaPredicted RBP18.43■□□□□ 0.54
DNMT1-208ENST00000586667 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
DNMT1-208ENST00000586667 ARHGAP23Q9P227 1491 aa18.42■□□□□ 0.54
DNMT1-208ENST00000586667 SLIT1O75093 1534 aa18.42■□□□□ 0.54
DNMT1-208ENST00000586667 ZFYVE9O95405 1425 aa18.41■□□□□ 0.54
DNMT1-208ENST00000586667 PPLO60437 1756 aa18.41■□□□□ 0.54
DNMT1-208ENST00000586667 TMEM2Q9UHN6 1383 aa18.36■□□□□ 0.53
DNMT1-208ENST00000586667 MYOM2P54296 1465 aa18.35■□□□□ 0.53
DNMT1-208ENST00000586667 NRXN1Q9ULB1 1477 aa18.34■□□□□ 0.53
DNMT1-208ENST00000586667 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
DNMT1-208ENST00000586667 RIMS2Q9UQ26 1411 aa18.33■□□□□ 0.53
DNMT1-208ENST00000586667 NRXN3Q9Y4C0 1643 aa18.33■□□□□ 0.52
DNMT1-208ENST00000586667 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
DNMT1-208ENST00000586667 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms