RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-208	ENST00000586667	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.48	□□□□□ -0.73	2e-9	■■■■■ 54.6
DNMT1-208	ENST00000586667	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.55	□□□□□ -0.24	1e-6	■■■■■ 38.5
DNMT1-208	ENST00000586667	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	5e-12	■■■■■ 32.2
DNMT1-208	ENST00000586667	EIF3H	O15372	352 aa	Known RBP eCLIP	12.56	□□□□□ -0.4	8e-7	■■■■■ 29.8
DNMT1-208	ENST00000586667	FXR2	P51116	673 aa	Known RBP eCLIP	14.23	□□□□□ -0.13	1e-8	■■■■□ 25.8
DNMT1-208	ENST00000586667	AQR	O60306	1485 aa	Known RBP eCLIP	21.32	■■□□□ 1	1e-7	■■■■□ 23.2
DNMT1-208	ENST00000586667	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	3e-8	■■■■□ 22.3
DNMT1-208	ENST00000586667	FMR1	Q06787	632 aa	Known RBP eCLIP	15.02	■□□□□ -0	1e-6	■■■■□ 19.6
DNMT1-208	ENST00000586667	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.41	□□□□□ -0.26	8e-9	■■■□□ 17.1
DNMT1-208	ENST00000586667	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.5	□□□□□ -0.41	1e-5	■■■□□ 16.7
DNMT1-208	ENST00000586667	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	19.81	■□□□□ 0.76	1e-10	■■□□□ 13.3
DNMT1-208	ENST00000586667	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.75	□□□□□ -0.21	4e-8	■■□□□ 12.7
DNMT1-208	ENST00000586667	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	16.73	■□□□□ 0.27	6e-7	■■□□□ 12.6
DNMT1-208	ENST00000586667	ZNF622	Q969S3	477 aa	Known RBP eCLIP	15.66	■□□□□ 0.1	1e-12	■■□□□ 11.5
DNMT1-208	ENST00000586667	PPIG	Q13427	754 aa	Known RBP eCLIP	13.76	□□□□□ -0.21	2e-8	■□□□□ 11.2
DNMT1-208	ENST00000586667	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.3	□□□□□ -0.6	7e-9	■□□□□ 10.9
DNMT1-208	ENST00000586667	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.01	□□□□□ -0.49	4e-6	■□□□□ 8.5
DNMT1-208	ENST00000586667	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.06	□□□□□ -0.48	8e-8	■□□□□ 8.5

Retrieved 18 of 18 RNA–protein pairs in 14.4 ms