RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 SHANK2Q9UPX8 1470 aa27.71■■■□□ 2.03
SRSF1-209ENST00000585096 DAPK1P53355 1430 aa27.69■■■□□ 2.02
SRSF1-209ENST00000585096 DUOX2Q9NRD8 1548 aa27.67■■■□□ 2.02
SRSF1-209ENST00000585096 FBXO41Q8TF61 875 aa27.67■■■□□ 2.02
SRSF1-209ENST00000585096 RRP7BPQ9NSQ0 103 aa27.67■■■□□ 2.02
SRSF1-209ENST00000585096 KIF15Q9NS87 1388 aa27.67■■■□□ 2.02
SRSF1-209ENST00000585096 FBXO31Q5XUX0 539 aaPredicted RBP27.65■■■□□ 2.02
SRSF1-209ENST00000585096 NCOA1Q15788 1441 aa27.65■■■□□ 2.02
SRSF1-209ENST00000585096 PZPP20742 1482 aa27.64■■■□□ 2.02
SRSF1-209ENST00000585096 PTPRTO14522 1441 aa27.64■■■□□ 2.02
SRSF1-209ENST00000585096 TNRQ92752 1358 aa27.63■■■□□ 2.01
SRSF1-209ENST00000585096 FAM50AQ14320 339 aaKnown RBP27.63■■■□□ 2.01
SRSF1-209ENST00000585096 EIF2AK4Q9P2K8 1649 aaKnown RBP27.63■■■□□ 2.01
SRSF1-209ENST00000585096 STRCQ7RTU9 1775 aa27.63■■■□□ 2.01
SRSF1-209ENST00000585096 DNMT1P26358 1616 aaKnown RBP27.62■■■□□ 2.01
SRSF1-209ENST00000585096 ANKRD30AQ9BXX3 1397 aa27.61■■■□□ 2.01
SRSF1-209ENST00000585096 ERBINQ96RT1 1412 aa27.61■■■□□ 2.01
SRSF1-209ENST00000585096 MYO3AQ8NEV4 1616 aa27.61■■■□□ 2.01
SRSF1-209ENST00000585096 RNF17Q9BXT8 1623 aaKnown RBP27.61■■■□□ 2.01
SRSF1-209ENST00000585096 CHIC2Q9UKJ5 165 aa27.61■■■□□ 2.01
SRSF1-209ENST00000585096 CAMSAP1Q5T5Y3 1602 aa27.6■■■□□ 2.01
SRSF1-209ENST00000585096 CEP170BQ9Y4F5 1589 aaPredicted RBP27.6■■■□□ 2.01
SRSF1-209ENST00000585096 CERKQ8TCT0 537 aa27.59■■■□□ 2.01
SRSF1-209ENST00000585096 CROCC2H7BZ55 1655 aa27.59■■■□□ 2.01
SRSF1-209ENST00000585096 A2ML1A8K2U0 1454 aa27.57■■■□□ 2
SRSF1-209ENST00000585096 ABCC3O15438 1527 aa27.57■■■□□ 2
SRSF1-209ENST00000585096 PKD2Q13563 968 aa27.57■■■□□ 2
SRSF1-209ENST00000585096 NCKAP5LQ9HCH0 1330 aa27.56■■■□□ 2
SRSF1-209ENST00000585096 PLA2R1Q13018 1463 aa27.56■■■□□ 2
SRSF1-209ENST00000585096 ZNF142P52746 1687 aaPredicted RBP27.56■■■□□ 2
SRSF1-209ENST00000585096 ZC3H13Q5T200 1668 aaKnown RBP27.52■■■□□ 2
SRSF1-209ENST00000585096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.52■■■□□ 21e-15■■□□□ 13.7
SRSF1-209ENST00000585096 MROH1Q8NDA8 1641 aa27.51■■□□□ 1.99
SRSF1-209ENST00000585096 NLRP1Q9C000 1473 aa27.51■■□□□ 1.99
SRSF1-209ENST00000585096 KANK1Q14678 1352 aa27.49■■□□□ 1.99
SRSF1-209ENST00000585096 THEMISQ8N1K5 641 aaPredicted RBP27.48■■□□□ 1.99
SRSF1-209ENST00000585096 ADGRL2O95490 1459 aa27.48■■□□□ 1.99
SRSF1-209ENST00000585096 PRDM15P57071 1507 aaPredicted RBP27.46■■□□□ 1.99
SRSF1-209ENST00000585096 PPARGC1BQ86YN6 1023 aaKnown RBP27.44■■□□□ 1.98
SRSF1-209ENST00000585096 ERVK-7P63135 1459 aa27.44■■□□□ 1.98
SRSF1-209ENST00000585096 SPATA31D1Q6ZQQ2 1576 aa27.43■■□□□ 1.98
SRSF1-209ENST00000585096 ARHGAP31Q2M1Z3 1444 aa27.43■■□□□ 1.98
SRSF1-209ENST00000585096 ANKLE2Q86XL3 938 aa27.41■■□□□ 1.98
SRSF1-209ENST00000585096 UGGT1Q9NYU2 1555 aa27.4■■□□□ 1.98
SRSF1-209ENST00000585096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.4■■□□□ 1.98
SRSF1-209ENST00000585096 ANKRD50Q9ULJ7 1429 aa27.4■■□□□ 1.98
SRSF1-209ENST00000585096 DEPDC5O75140 1603 aa27.39■■□□□ 1.98
SRSF1-209ENST00000585096 CEP152O94986 1710 aa27.38■■□□□ 1.97
SRSF1-209ENST00000585096 LTBP4Q8N2S1 1624 aa27.35■■□□□ 1.97
SRSF1-209ENST00000585096 LMTK2Q8IWU2 1503 aa27.35■■□□□ 1.97
SRSF1-209ENST00000585096 ZNF335Q9H4Z2 1342 aaPredicted RBP27.35■■□□□ 1.97
SRSF1-209ENST00000585096 ROCK1Q13464 1354 aa27.35■■□□□ 1.97
SRSF1-209ENST00000585096 VWDEQ8N2E2 1590 aa27.31■■□□□ 1.96
SRSF1-209ENST00000585096 ITGAEP38570 1179 aa27.31■■□□□ 1.96
SRSF1-209ENST00000585096 IQSEC2Q5JU85 1478 aa27.28■■□□□ 1.96
SRSF1-209ENST00000585096 NPHP4O75161 1426 aaPredicted RBP27.26■■□□□ 1.95
SRSF1-209ENST00000585096 NEURL4Q96JN8 1562 aa27.26■■□□□ 1.95
SRSF1-209ENST00000585096 MED14O60244 1454 aa27.25■■□□□ 1.95
SRSF1-209ENST00000585096 STAG3Q9UJ98 1225 aa27.25■■□□□ 1.95
SRSF1-209ENST00000585096 POLR1AO95602 1720 aaPredicted RBP27.23■■□□□ 1.95
SRSF1-209ENST00000585096 EFCAB6Q5THR3 1501 aa27.22■■□□□ 1.95
SRSF1-209ENST00000585096 IDI1Q13907 227 aa27.21■■□□□ 1.95
SRSF1-209ENST00000585096 NOS1P29475 1434 aa27.2■■□□□ 1.94
SRSF1-209ENST00000585096 EID1Q9Y6B2 187 aa27.2■■□□□ 1.94
SRSF1-209ENST00000585096 RPRD2Q5VT52 1461 aaKnown RBP27.19■■□□□ 1.94
SRSF1-209ENST00000585096 RRBP1Q9P2E9 1410 aaKnown RBP27.19■■□□□ 1.94
SRSF1-209ENST00000585096 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
SRSF1-209ENST00000585096 SLC52A1Q9NWF4 448 aa27.19■■□□□ 1.94
SRSF1-209ENST00000585096 CFAP65Q6ZU64 1925 aaKnown RBP27.18■■□□□ 1.94
SRSF1-209ENST00000585096 UBR1Q8IWV7 1749 aa27.17■■□□□ 1.94
SRSF1-209ENST00000585096 SCAF11Q99590 1463 aaKnown RBP27.16■■□□□ 1.94
SRSF1-209ENST00000585096 ARHGAP23Q9P227 1491 aa27.16■■□□□ 1.94
SRSF1-209ENST00000585096 SLIT1O75093 1534 aa27.16■■□□□ 1.94
SRSF1-209ENST00000585096 TMEM2Q9UHN6 1383 aa27.15■■□□□ 1.94
SRSF1-209ENST00000585096 LTKP29376 864 aa27.15■■□□□ 1.94
SRSF1-209ENST00000585096 UNC13BO14795 1591 aa27.14■■□□□ 1.94
SRSF1-209ENST00000585096 NUP155O75694 1391 aa27.13■■□□□ 1.93
SRSF1-209ENST00000585096 CPS1P31327 1500 aa27.13■■□□□ 1.93
SRSF1-209ENST00000585096 PIK3C2BO00750 1634 aa27.12■■□□□ 1.93
SRSF1-209ENST00000585096 SYNMO15061 1565 aa27.12■■□□□ 1.93
SRSF1-209ENST00000585096 UBAP1LF5GYI3 381 aa27.11■■□□□ 1.93
SRSF1-209ENST00000585096 TET3O43151 1660 aa27.11■■□□□ 1.93
SRSF1-209ENST00000585096 IQGAP1P46940 1657 aa27.11■■□□□ 1.93
SRSF1-209ENST00000585096 KDM5AP29375 1690 aaKnown RBP27.06■■□□□ 1.92
SRSF1-209ENST00000585096 ADGRB3O60242 1522 aa27.05■■□□□ 1.92
SRSF1-209ENST00000585096 IQGAP3Q86VI3 1631 aa27.03■■□□□ 1.92
SRSF1-209ENST00000585096 GCC2Q8IWJ2 1684 aa27.02■■□□□ 1.92
SRSF1-209ENST00000585096 HDGFP51858 240 aaKnown RBP27.02■■□□□ 1.92
SRSF1-209ENST00000585096 TOM1O60784 492 aa27.01■■□□□ 1.91
SRSF1-209ENST00000585096 CHGAP10645 457 aaKnown RBP26.99■■□□□ 1.91
SRSF1-209ENST00000585096 NAIPQ13075 1403 aa26.99■■□□□ 1.91
SRSF1-209ENST00000585096 BCANQ96GW7 911 aa26.96■■□□□ 1.91
SRSF1-209ENST00000585096 E9PCH4 1651 aa26.95■■□□□ 1.91
SRSF1-209ENST00000585096 PPP1R15AO75807 674 aaPredicted RBP26.94■■□□□ 1.9
SRSF1-209ENST00000585096 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.93■■□□□ 1.9
SRSF1-209ENST00000585096 SLC26A8Q96RN1 970 aa26.93■■□□□ 1.9
SRSF1-209ENST00000585096 LRRC7Q96NW7 1537 aa26.93■■□□□ 1.9
SRSF1-209ENST00000585096 HFM1A2PYH4 1435 aa26.92■■□□□ 1.9
SRSF1-209ENST00000585096 RIMS2Q9UQ26 1411 aa26.92■■□□□ 1.9
SRSF1-209ENST00000585096 SCAF1Q9H7N4 1312 aaKnown RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms