RNA–Protein interactions for RNA: ENST00000584103.5

ACADVL-238, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 4

Gene ACADVL, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-238	ENST00000584103	KDM5D	Q9BY66	1539 aa		33.92	■■■■□ 3.02
ACADVL-238	ENST00000584103	RNF17	Q9BXT8	1623 aa	Known RBP	33.9	■■■■□ 3.02
ACADVL-238	ENST00000584103	DUOX2	Q9NRD8	1548 aa		33.89	■■■■□ 3.02
ACADVL-238	ENST00000584103	PTPRK	Q15262	1439 aa		33.85	■■■■□ 3.01
ACADVL-238	ENST00000584103	KIF15	Q9NS87	1388 aa		33.85	■■■■□ 3.01
ACADVL-238	ENST00000584103	MYO3A	Q8NEV4	1616 aa		33.81	■■■■□ 3
ACADVL-238	ENST00000584103	ZC3H13	Q5T200	1668 aa	Known RBP	33.8	■■■■□ 3
ACADVL-238	ENST00000584103	WASHC2C	Q9Y4E1	1318 aa		33.8	■■■■□ 3
ACADVL-238	ENST00000584103	ERBIN	Q96RT1	1412 aa		33.8	■■■■□ 3
ACADVL-238	ENST00000584103	FAM50A	Q14320	339 aa	Known RBP	33.78	■■■■□ 3
ACADVL-238	ENST00000584103	ZNF142	P52746	1687 aa	Predicted RBP	33.77	■■■■□ 3
ACADVL-238	ENST00000584103	PZP	P20742	1482 aa		33.77	■■■■□ 3
ACADVL-238	ENST00000584103	MROH1	Q8NDA8	1641 aa		33.76	■■■■□ 3
ACADVL-238	ENST00000584103	ANKRD30A	Q9BXX3	1397 aa		33.76	■■■■□ 3
ACADVL-238	ENST00000584103	RRP7BP	Q9NSQ0	103 aa		33.75	■■■□□ 2.99
ACADVL-238	ENST00000584103	STRC	Q7RTU9	1775 aa		33.74	■■■□□ 2.99
ACADVL-238	ENST00000584103	ABCC3	O15438	1527 aa		33.74	■■■□□ 2.99
ACADVL-238	ENST00000584103	ADGRL2	O95490	1459 aa		33.72	■■■□□ 2.99
ACADVL-238	ENST00000584103	CHIC2	Q9UKJ5	165 aa		33.72	■■■□□ 2.99
ACADVL-238	ENST00000584103	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.72	■■■□□ 2.99
ACADVL-238	ENST00000584103	PRDM15	P57071	1507 aa	Predicted RBP	33.7	■■■□□ 2.99
ACADVL-238	ENST00000584103	NCOA1	Q15788	1441 aa		33.7	■■■□□ 2.98
ACADVL-238	ENST00000584103	CEP152	O94986	1710 aa		33.68	■■■□□ 2.98
ACADVL-238	ENST00000584103	DEPDC5	O75140	1603 aa		33.67	■■■□□ 2.98
ACADVL-238	ENST00000584103	CAMSAP1	Q5T5Y3	1602 aa		33.65	■■■□□ 2.98
ACADVL-238	ENST00000584103	TNR	Q92752	1358 aa		33.65	■■■□□ 2.98
ACADVL-238	ENST00000584103	DMRT2	Q9Y5R5	561 aa		33.64	■■■□□ 2.98
ACADVL-238	ENST00000584103	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.63	■■■□□ 2.97
ACADVL-238	ENST00000584103	A2ML1	A8K2U0	1454 aa		33.63	■■■□□ 2.97
ACADVL-238	ENST00000584103	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.62	■■■□□ 2.97
ACADVL-238	ENST00000584103	PLA2R1	Q13018	1463 aa		33.58	■■■□□ 2.97
ACADVL-238	ENST00000584103	SPATA31D1	Q6ZQQ2	1576 aa		33.57	■■■□□ 2.96
ACADVL-238	ENST00000584103	PTPRT	O14522	1441 aa		33.57	■■■□□ 2.96
ACADVL-238	ENST00000584103	KANK1	Q14678	1352 aa		33.56	■■■□□ 2.96
ACADVL-238	ENST00000584103	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.56	■■■□□ 2.96
ACADVL-238	ENST00000584103	NLRP1	Q9C000	1473 aa		33.55	■■■□□ 2.96
ACADVL-238	ENST00000584103	ERVK-7	P63135	1459 aa		33.54	■■■□□ 2.96
ACADVL-238	ENST00000584103	ANKRD50	Q9ULJ7	1429 aa		33.53	■■■□□ 2.96
ACADVL-238	ENST00000584103	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.52	■■■□□ 2.96
ACADVL-238	ENST00000584103	ARHGAP31	Q2M1Z3	1444 aa		33.51	■■■□□ 2.95
ACADVL-238	ENST00000584103	VWDE	Q8N2E2	1590 aa		33.51	■■■□□ 2.95
ACADVL-238	ENST00000584103	ROCK1	Q13464	1354 aa		33.49	■■■□□ 2.95
ACADVL-238	ENST00000584103	LMTK2	Q8IWU2	1503 aa		33.49	■■■□□ 2.95
ACADVL-238	ENST00000584103	ILDR1	Q86SU0	546 aa	Predicted RBP	33.47	■■■□□ 2.95
ACADVL-238	ENST00000584103	CFAP65	Q6ZU64	1925 aa	Known RBP	33.47	■■■□□ 2.95
ACADVL-238	ENST00000584103	PKD2	Q13563	968 aa		33.46	■■■□□ 2.95
ACADVL-238	ENST00000584103	UGGT1	Q9NYU2	1555 aa		33.45	■■■□□ 2.95
ACADVL-238	ENST00000584103	RRBP1	Q9P2E9	1410 aa	Known RBP	33.44	■■■□□ 2.94
ACADVL-238	ENST00000584103	NCKAP5L	Q9HCH0	1330 aa		33.43	■■■□□ 2.94
ACADVL-238	ENST00000584103	POLR1A	O95602	1720 aa	Predicted RBP	33.42	■■■□□ 2.94
ACADVL-238	ENST00000584103	ITGAE	P38570	1179 aa		33.4	■■■□□ 2.94
ACADVL-238	ENST00000584103	EFCAB6	Q5THR3	1501 aa		33.39	■■■□□ 2.94
ACADVL-238	ENST00000584103	UNC13B	O14795	1591 aa		33.38	■■■□□ 2.93
ACADVL-238	ENST00000584103	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.37	■■■□□ 2.93
ACADVL-238	ENST00000584103	FBXO41	Q8TF61	875 aa		33.35	■■■□□ 2.93
ACADVL-238	ENST00000584103	CERK	Q8TCT0	537 aa		33.34	■■■□□ 2.93
ACADVL-238	ENST00000584103	UBR1	Q8IWV7	1749 aa		33.32	■■■□□ 2.92
ACADVL-238	ENST00000584103	NEURL4	Q96JN8	1562 aa		33.32	■■■□□ 2.92
ACADVL-238	ENST00000584103	TET3	O43151	1660 aa		33.31	■■■□□ 2.92
ACADVL-238	ENST00000584103	RPRD2	Q5VT52	1461 aa	Known RBP	33.28	■■■□□ 2.92
ACADVL-238	ENST00000584103	GCC2	Q8IWJ2	1684 aa		33.28	■■■□□ 2.92
ACADVL-238	ENST00000584103	LTBP4	Q8N2S1	1624 aa		33.28	■■■□□ 2.92
ACADVL-238	ENST00000584103	ANKLE2	Q86XL3	938 aa		33.27	■■■□□ 2.92
ACADVL-238	ENST00000584103	SYNM	O15061	1565 aa		33.25	■■■□□ 2.91
ACADVL-238	ENST00000584103	PIK3C2B	O00750	1634 aa		33.24	■■■□□ 2.91
ACADVL-238	ENST00000584103	IQGAP3	Q86VI3	1631 aa		33.24	■■■□□ 2.91
ACADVL-238	ENST00000584103	NOS1	P29475	1434 aa		33.24	■■■□□ 2.91
ACADVL-238	ENST00000584103	KDM5A	P29375	1690 aa	Known RBP	33.21	■■■□□ 2.91
ACADVL-238	ENST00000584103	MED14	O60244	1454 aa		33.21	■■■□□ 2.91
ACADVL-238	ENST00000584103	NPHP4	O75161	1426 aa	Predicted RBP	33.19	■■■□□ 2.9
ACADVL-238	ENST00000584103	IQGAP1	P46940	1657 aa		33.18	■■■□□ 2.9
ACADVL-238	ENST00000584103	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.18	■■■□□ 2.9
ACADVL-238	ENST00000584103	SLIT1	O75093	1534 aa		33.18	■■■□□ 2.9
ACADVL-238	ENST00000584103	ARHGAP23	Q9P227	1491 aa		33.16	■■■□□ 2.9
ACADVL-238	ENST00000584103		E9PCH4	1651 aa		33.15	■■■□□ 2.9
ACADVL-238	ENST00000584103	NUP155	O75694	1391 aa		33.15	■■■□□ 2.9
ACADVL-238	ENST00000584103	IQSEC2	Q5JU85	1478 aa		33.15	■■■□□ 2.9
ACADVL-238	ENST00000584103	SCAF11	Q99590	1463 aa	Known RBP	33.13	■■■□□ 2.89
ACADVL-238	ENST00000584103	STAG3	Q9UJ98	1225 aa		33.13	■■■□□ 2.89
ACADVL-238	ENST00000584103	ADGRB3	O60242	1522 aa		33.12	■■■□□ 2.89
ACADVL-238	ENST00000584103	IDI1	Q13907	227 aa		33.12	■■■□□ 2.89
ACADVL-238	ENST00000584103	NAIP	Q13075	1403 aa		33.11	■■■□□ 2.89
ACADVL-238	ENST00000584103	SLC52A1	Q9NWF4	448 aa		33.11	■■■□□ 2.89
ACADVL-238	ENST00000584103	TMEM2	Q9UHN6	1383 aa		33.08	■■■□□ 2.89
ACADVL-238	ENST00000584103	HFM1	A2PYH4	1435 aa		33.06	■■■□□ 2.88
ACADVL-238	ENST00000584103	EID1	Q9Y6B2	187 aa		33.05	■■■□□ 2.88
ACADVL-238	ENST00000584103	CPS1	P31327	1500 aa		33.03	■■■□□ 2.88
ACADVL-238	ENST00000584103	TXNDC2	Q86VQ3	553 aa		33.03	■■■□□ 2.88
ACADVL-238	ENST00000584103	LTK	P29376	864 aa		33.01	■■■□□ 2.87
ACADVL-238	ENST00000584103	MYO5B	Q9ULV0	1848 aa		32.98	■■■□□ 2.87
ACADVL-238	ENST00000584103	TMEM131L	A2VDJ0	1609 aa		32.97	■■■□□ 2.87
ACADVL-238	ENST00000584103	SPHKAP	Q2M3C7	1700 aa		32.95	■■■□□ 2.87
ACADVL-238	ENST00000584103	STRCP1	A6NGW2	1772 aa		32.89	■■■□□ 2.86
ACADVL-238	ENST00000584103	ZFYVE9	O95405	1425 aa		32.88	■■■□□ 2.85
ACADVL-238	ENST00000584103	CHGA	P10645	457 aa	Known RBP	32.86	■■■□□ 2.85
ACADVL-238	ENST00000584103	RIMS2	Q9UQ26	1411 aa		32.85	■■■□□ 2.85
ACADVL-238	ENST00000584103	TRIM52	Q96A61	297 aa		32.85	■■■□□ 2.85
ACADVL-238	ENST00000584103	HDGF	P51858	240 aa	Known RBP	32.83	■■■□□ 2.85
ACADVL-238	ENST00000584103	TRPM2	O94759	1503 aa		32.82	■■■□□ 2.84
ACADVL-238	ENST00000584103	UBAP1L	F5GYI3	381 aa		32.8	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms