RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ZC3H13Q5T200 1668 aaKnown RBP16.81■□□□□ 0.28
NDEL1-208ENST00000580237 KIF15Q9NS87 1388 aa16.8■□□□□ 0.28
NDEL1-208ENST00000580237 CEP152O94986 1710 aa16.79■□□□□ 0.28
NDEL1-208ENST00000580237 MYO3AQ8NEV4 1616 aa16.79■□□□□ 0.28
NDEL1-208ENST00000580237 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
NDEL1-208ENST00000580237 HSPA2P54652 639 aa16.78■□□□□ 0.28
NDEL1-208ENST00000580237 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
NDEL1-208ENST00000580237 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
NDEL1-208ENST00000580237 NPATQ14207 1427 aa16.78■□□□□ 0.28
NDEL1-208ENST00000580237 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
NDEL1-208ENST00000580237 ERBINQ96RT1 1412 aa16.77■□□□□ 0.27
NDEL1-208ENST00000580237 ZNF142P52746 1687 aaPredicted RBP16.76■□□□□ 0.27
NDEL1-208ENST00000580237 MROH1Q8NDA8 1641 aa16.75■□□□□ 0.27
NDEL1-208ENST00000580237 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
NDEL1-208ENST00000580237 CHIC2Q9UKJ5 165 aa16.75■□□□□ 0.27
NDEL1-208ENST00000580237 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
NDEL1-208ENST00000580237 WASHC2CQ9Y4E1 1318 aa16.74■□□□□ 0.27
NDEL1-208ENST00000580237 PRDM15P57071 1507 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-208ENST00000580237 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
NDEL1-208ENST00000580237 ABCC3O15438 1527 aa16.73■□□□□ 0.27
NDEL1-208ENST00000580237 DEPDC5O75140 1603 aa16.73■□□□□ 0.27
NDEL1-208ENST00000580237 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
NDEL1-208ENST00000580237 PZPP20742 1482 aa16.72■□□□□ 0.27
NDEL1-208ENST00000580237 CFAP65Q6ZU64 1925 aaKnown RBP16.72■□□□□ 0.27
NDEL1-208ENST00000580237 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
NDEL1-208ENST00000580237 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
NDEL1-208ENST00000580237 KANK1Q14678 1352 aa16.68■□□□□ 0.26
NDEL1-208ENST00000580237 STRCQ7RTU9 1775 aa16.68■□□□□ 0.26
NDEL1-208ENST00000580237 TNRQ92752 1358 aa16.66■□□□□ 0.26
NDEL1-208ENST00000580237 ITGAEP38570 1179 aa16.66■□□□□ 0.26
NDEL1-208ENST00000580237 ANKRD50Q9ULJ7 1429 aa16.65■□□□□ 0.26
NDEL1-208ENST00000580237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.268e-10■■□□□ 12.4
NDEL1-208ENST00000580237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
NDEL1-208ENST00000580237 A2ML1A8K2U0 1454 aa16.63■□□□□ 0.25
NDEL1-208ENST00000580237 POLR1AO95602 1720 aaPredicted RBP16.63■□□□□ 0.25
NDEL1-208ENST00000580237 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
NDEL1-208ENST00000580237 ERVK-7P63135 1459 aa16.62■□□□□ 0.25
NDEL1-208ENST00000580237 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
NDEL1-208ENST00000580237 ROCK1Q13464 1354 aa16.62■□□□□ 0.25
NDEL1-208ENST00000580237 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
NDEL1-208ENST00000580237 UNC13BO14795 1591 aa16.61■□□□□ 0.25
NDEL1-208ENST00000580237 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
NDEL1-208ENST00000580237 EFCAB6Q5THR3 1501 aa16.6■□□□□ 0.25
NDEL1-208ENST00000580237 VWDEQ8N2E2 1590 aa16.6■□□□□ 0.25
NDEL1-208ENST00000580237 PLA2R1Q13018 1463 aa16.59■□□□□ 0.25
NDEL1-208ENST00000580237 TET3O43151 1660 aa16.59■□□□□ 0.25
NDEL1-208ENST00000580237 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
NDEL1-208ENST00000580237 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
NDEL1-208ENST00000580237 LMTK2Q8IWU2 1503 aa16.58■□□□□ 0.24
NDEL1-208ENST00000580237 UGGT1Q9NYU2 1555 aa16.58■□□□□ 0.24
NDEL1-208ENST00000580237 ARHGAP31Q2M1Z3 1444 aa16.56■□□□□ 0.24
NDEL1-208ENST00000580237 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
NDEL1-208ENST00000580237 IQGAP3Q86VI3 1631 aa16.54■□□□□ 0.24
NDEL1-208ENST00000580237 PTPRTO14522 1441 aa16.53■□□□□ 0.24
NDEL1-208ENST00000580237 PIK3C2BO00750 1634 aa16.52■□□□□ 0.24
NDEL1-208ENST00000580237 NCKAP5LQ9HCH0 1330 aa16.5■□□□□ 0.23
NDEL1-208ENST00000580237 RPRD2Q5VT52 1461 aaKnown RBP16.5■□□□□ 0.23
NDEL1-208ENST00000580237 PKD2Q13563 968 aa16.5■□□□□ 0.23
NDEL1-208ENST00000580237 SYNMO15061 1565 aa16.5■□□□□ 0.23
NDEL1-208ENST00000580237 E9PCH4 1651 aa16.5■□□□□ 0.23
NDEL1-208ENST00000580237 NEURL4Q96JN8 1562 aa16.49■□□□□ 0.23
NDEL1-208ENST00000580237 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
NDEL1-208ENST00000580237 KDM5AP29375 1690 aaKnown RBP16.48■□□□□ 0.23
NDEL1-208ENST00000580237 IQGAP1P46940 1657 aa16.47■□□□□ 0.23
NDEL1-208ENST00000580237 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
NDEL1-208ENST00000580237 NUP155O75694 1391 aa16.46■□□□□ 0.23
NDEL1-208ENST00000580237 ADGRB3O60242 1522 aa16.45■□□□□ 0.22
NDEL1-208ENST00000580237 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
NDEL1-208ENST00000580237 NOS1P29475 1434 aa16.45■□□□□ 0.22
NDEL1-208ENST00000580237 NAIPQ13075 1403 aa16.45■□□□□ 0.22
NDEL1-208ENST00000580237 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
NDEL1-208ENST00000580237 SPHKAPQ2M3C7 1700 aa16.44■□□□□ 0.22
NDEL1-208ENST00000580237 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
NDEL1-208ENST00000580237 NPHP4O75161 1426 aaPredicted RBP16.42■□□□□ 0.22
NDEL1-208ENST00000580237 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
NDEL1-208ENST00000580237 SLIT1O75093 1534 aa16.41■□□□□ 0.22
NDEL1-208ENST00000580237 ILDR1Q86SU0 546 aaPredicted RBP16.41■□□□□ 0.22
NDEL1-208ENST00000580237 CERKQ8TCT0 537 aa16.41■□□□□ 0.22
NDEL1-208ENST00000580237 LTBP4Q8N2S1 1624 aa16.4■□□□□ 0.22
NDEL1-208ENST00000580237 MED14O60244 1454 aa16.39■□□□□ 0.21
NDEL1-208ENST00000580237 ARHGAP23Q9P227 1491 aa16.38■□□□□ 0.21
NDEL1-208ENST00000580237 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
NDEL1-208ENST00000580237 ZNF335Q9H4Z2 1342 aaPredicted RBP16.38■□□□□ 0.21
NDEL1-208ENST00000580237 IDI1Q13907 227 aa16.37■□□□□ 0.21
NDEL1-208ENST00000580237 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
NDEL1-208ENST00000580237 EID1Q9Y6B2 187 aa16.37■□□□□ 0.21
NDEL1-208ENST00000580237 TRIM52Q96A61 297 aa16.36■□□□□ 0.21
NDEL1-208ENST00000580237 TMEM131LA2VDJ0 1609 aa16.36■□□□□ 0.21
NDEL1-208ENST00000580237 TMEM2Q9UHN6 1383 aa16.36■□□□□ 0.21
NDEL1-208ENST00000580237 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
NDEL1-208ENST00000580237 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
NDEL1-208ENST00000580237 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
NDEL1-208ENST00000580237 CPS1P31327 1500 aa16.34■□□□□ 0.21
NDEL1-208ENST00000580237 KIF1BO60333 1816 aa16.33■□□□□ 0.21
NDEL1-208ENST00000580237 TRPM2O94759 1503 aa16.31■□□□□ 0.2
NDEL1-208ENST00000580237 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
NDEL1-208ENST00000580237 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
NDEL1-208ENST00000580237 STRCP1A6NGW2 1772 aa16.3■□□□□ 0.2
NDEL1-208ENST00000580237 LTKP29376 864 aa16.29■□□□□ 0.2
NDEL1-208ENST00000580237 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms