RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 KIF15Q9NS87 1388 aa21.51■■□□□ 1.03
GGA3-203ENST00000577435 ANKRD30AQ9BXX3 1397 aa21.5■■□□□ 1.03
GGA3-203ENST00000577435 RRP7BPQ9NSQ0 103 aa21.5■■□□□ 1.03
GGA3-203ENST00000577435 NCOA1Q15788 1441 aa21.49■■□□□ 1.03
GGA3-203ENST00000577435 RNF17Q9BXT8 1623 aaKnown RBP21.49■■□□□ 1.03
GGA3-203ENST00000577435 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
GGA3-203ENST00000577435 WASHC2CQ9Y4E1 1318 aa21.49■■□□□ 1.03
GGA3-203ENST00000577435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.03
GGA3-203ENST00000577435 UHRF1BP1Q6BDS2 1440 aa21.48■■□□□ 1.03
GGA3-203ENST00000577435 HSPA2P54652 639 aa21.48■■□□□ 1.03
GGA3-203ENST00000577435 CHIC2Q9UKJ5 165 aa21.48■■□□□ 1.03
GGA3-203ENST00000577435 ERBINQ96RT1 1412 aa21.47■■□□□ 1.03
GGA3-203ENST00000577435 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
GGA3-203ENST00000577435 PTPRKQ15262 1439 aa21.46■■□□□ 1.03
GGA3-203ENST00000577435 KDM5DQ9BY66 1539 aa21.46■■□□□ 1.03
GGA3-203ENST00000577435 MROH1Q8NDA8 1641 aa21.42■■□□□ 1.02
GGA3-203ENST00000577435 PZPP20742 1482 aa21.4■■□□□ 1.02
GGA3-203ENST00000577435 ZC3H13Q5T200 1668 aaKnown RBP21.4■■□□□ 1.02
GGA3-203ENST00000577435 ABCC3O15438 1527 aa21.39■■□□□ 1.02
GGA3-203ENST00000577435 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
GGA3-203ENST00000577435 ROCK1Q13464 1354 aa21.37■■□□□ 1.01
GGA3-203ENST00000577435 DEPDC5O75140 1603 aa21.37■■□□□ 1.01
GGA3-203ENST00000577435 FBXO31Q5XUX0 539 aaPredicted RBP21.37■■□□□ 1.01
GGA3-203ENST00000577435 PRDM15P57071 1507 aaPredicted RBP21.36■■□□□ 1.01
GGA3-203ENST00000577435 ANKRD50Q9ULJ7 1429 aa21.35■■□□□ 1.01
GGA3-203ENST00000577435 KANK1Q14678 1352 aa21.33■■□□□ 1
GGA3-203ENST00000577435 TNRQ92752 1358 aa21.33■■□□□ 1
GGA3-203ENST00000577435 STRCQ7RTU9 1775 aa21.33■■□□□ 1
GGA3-203ENST00000577435 MYO3AQ8NEV4 1616 aa21.33■■□□□ 1
GGA3-203ENST00000577435 CEP152O94986 1710 aa21.32■■□□□ 1
GGA3-203ENST00000577435 ARHGAP31Q2M1Z3 1444 aa21.32■■□□□ 1
GGA3-203ENST00000577435 ZNF142P52746 1687 aaPredicted RBP21.32■■□□□ 1
GGA3-203ENST00000577435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.32■■□□□ 12e-7■■□□□ 11.4
GGA3-203ENST00000577435 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
GGA3-203ENST00000577435 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
GGA3-203ENST00000577435 A2ML1A8K2U0 1454 aa21.3■■□□□ 1
GGA3-203ENST00000577435 CEP170BQ9Y4F5 1589 aaPredicted RBP21.3■■□□□ 1
GGA3-203ENST00000577435 CAMSAP1Q5T5Y3 1602 aa21.29■■□□□ 1
GGA3-203ENST00000577435 CFAP65Q6ZU64 1925 aaKnown RBP21.29■■□□□ 1
GGA3-203ENST00000577435 LMTK2Q8IWU2 1503 aa21.29■■□□□ 1
GGA3-203ENST00000577435 SPATA31D1Q6ZQQ2 1576 aa21.28■■□□□ 1
GGA3-203ENST00000577435 ITGAEP38570 1179 aa21.28■■□□□ 1
GGA3-203ENST00000577435 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
GGA3-203ENST00000577435 ERVK-7P63135 1459 aa21.26■□□□□ 0.99
GGA3-203ENST00000577435 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
GGA3-203ENST00000577435 PTPRTO14522 1441 aa21.24■□□□□ 0.99
GGA3-203ENST00000577435 PKD2Q13563 968 aa21.23■□□□□ 0.99
GGA3-203ENST00000577435 THEMISQ8N1K5 641 aaPredicted RBP21.21■□□□□ 0.99
GGA3-203ENST00000577435 UNC13BO14795 1591 aa21.2■□□□□ 0.98
GGA3-203ENST00000577435 NCKAP5LQ9HCH0 1330 aa21.18■□□□□ 0.98
GGA3-203ENST00000577435 UGGT1Q9NYU2 1555 aa21.18■□□□□ 0.98
GGA3-203ENST00000577435 EFCAB6Q5THR3 1501 aa21.17■□□□□ 0.98
GGA3-203ENST00000577435 RPRD2Q5VT52 1461 aaKnown RBP21.16■□□□□ 0.98
GGA3-203ENST00000577435 NOS1P29475 1434 aa21.15■□□□□ 0.98
GGA3-203ENST00000577435 TET3O43151 1660 aa21.15■□□□□ 0.98
GGA3-203ENST00000577435 NAIPQ13075 1403 aa21.13■□□□□ 0.97
GGA3-203ENST00000577435 ANKLE2Q86XL3 938 aa21.13■□□□□ 0.97
GGA3-203ENST00000577435 NUP155O75694 1391 aa21.12■□□□□ 0.97
GGA3-203ENST00000577435 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
GGA3-203ENST00000577435 IQGAP3Q86VI3 1631 aa21.11■□□□□ 0.97
GGA3-203ENST00000577435 SLC52A1Q9NWF4 448 aa21.11■□□□□ 0.97
GGA3-203ENST00000577435 UBR1Q8IWV7 1749 aa21.1■□□□□ 0.97
GGA3-203ENST00000577435 IDI1Q13907 227 aa21.1■□□□□ 0.97
GGA3-203ENST00000577435 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
GGA3-203ENST00000577435 SYNMO15061 1565 aa21.08■□□□□ 0.97
GGA3-203ENST00000577435 POLR1AO95602 1720 aaPredicted RBP21.08■□□□□ 0.97
GGA3-203ENST00000577435 CERKQ8TCT0 537 aa21.07■□□□□ 0.96
GGA3-203ENST00000577435 KDM5AP29375 1690 aaKnown RBP21.07■□□□□ 0.96
GGA3-203ENST00000577435 MED14O60244 1454 aa21.07■□□□□ 0.96
GGA3-203ENST00000577435 NEURL4Q96JN8 1562 aa21.06■□□□□ 0.96
GGA3-203ENST00000577435 E9PCH4 1651 aa21.05■□□□□ 0.96
GGA3-203ENST00000577435 PIK3C2BO00750 1634 aa21.05■□□□□ 0.96
GGA3-203ENST00000577435 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
GGA3-203ENST00000577435 ARHGAP23Q9P227 1491 aa21.04■□□□□ 0.96
GGA3-203ENST00000577435 SLIT1O75093 1534 aa21.04■□□□□ 0.96
GGA3-203ENST00000577435 FBXO41Q8TF61 875 aa21.03■□□□□ 0.96
GGA3-203ENST00000577435 STAG3Q9UJ98 1225 aa21.02■□□□□ 0.96
GGA3-203ENST00000577435 LTBP4Q8N2S1 1624 aa21.02■□□□□ 0.96
GGA3-203ENST00000577435 NPHP4O75161 1426 aaPredicted RBP21.01■□□□□ 0.95
GGA3-203ENST00000577435 TMEM2Q9UHN6 1383 aa21■□□□□ 0.95
GGA3-203ENST00000577435 LTKP29376 864 aa21■□□□□ 0.95
GGA3-203ENST00000577435 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
GGA3-203ENST00000577435 EID1Q9Y6B2 187 aa20.98■□□□□ 0.95
GGA3-203ENST00000577435 SCAF11Q99590 1463 aaKnown RBP20.98■□□□□ 0.95
GGA3-203ENST00000577435 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
GGA3-203ENST00000577435 ADGRB3O60242 1522 aa20.97■□□□□ 0.95
GGA3-203ENST00000577435 IQGAP1P46940 1657 aa20.96■□□□□ 0.95
GGA3-203ENST00000577435 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
GGA3-203ENST00000577435 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
GGA3-203ENST00000577435 IQSEC2Q5JU85 1478 aa20.94■□□□□ 0.94
GGA3-203ENST00000577435 TMEM131LA2VDJ0 1609 aa20.93■□□□□ 0.94
GGA3-203ENST00000577435 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
GGA3-203ENST00000577435 HDGFP51858 240 aaKnown RBP20.91■□□□□ 0.94
GGA3-203ENST00000577435 SPHKAPQ2M3C7 1700 aa20.91■□□□□ 0.94
GGA3-203ENST00000577435 SLC4A1APQ9BWU0 796 aaKnown RBP20.89■□□□□ 0.93
GGA3-203ENST00000577435 ZFYVE9O95405 1425 aa20.88■□□□□ 0.93
GGA3-203ENST00000577435 SETD5Q9C0A6 1442 aa20.88■□□□□ 0.93
GGA3-203ENST00000577435 CPS1P31327 1500 aa20.87■□□□□ 0.93
GGA3-203ENST00000577435 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
GGA3-203ENST00000577435 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms