RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 ZNF335Q9H4Z2 1342 aaPredicted RBP15.42■□□□□ 0.06
TOM1L1-223ENST00000576932 KIDINS220Q9ULH0 1771 aa15.41■□□□□ 0.06
TOM1L1-223ENST00000576932 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
TOM1L1-223ENST00000576932 PREX2Q70Z35 1606 aa15.41■□□□□ 0.06
TOM1L1-223ENST00000576932 ZNF142P52746 1687 aaPredicted RBP15.41■□□□□ 0.06
TOM1L1-223ENST00000576932 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
TOM1L1-223ENST00000576932 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
TOM1L1-223ENST00000576932 ATP1B4Q9UN42 357 aaPredicted RBP15.4■□□□□ 0.06
TOM1L1-223ENST00000576932 ITSN2Q9NZM3 1697 aa15.4■□□□□ 0.06
TOM1L1-223ENST00000576932 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
TOM1L1-223ENST00000576932 ARHGAP35Q9NRY4 1499 aa15.37■□□□□ 0.05
TOM1L1-223ENST00000576932 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
TOM1L1-223ENST00000576932 MYO3AQ8NEV4 1616 aa15.36■□□□□ 0.05
TOM1L1-223ENST00000576932 CEP170BQ9Y4F5 1589 aaPredicted RBP15.36■□□□□ 0.05
TOM1L1-223ENST00000576932 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
TOM1L1-223ENST00000576932 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
TOM1L1-223ENST00000576932 SAMD9LQ8IVG5 1584 aa15.33■□□□□ 0.05
TOM1L1-223ENST00000576932 LRRIQ1Q96JM4 1722 aa15.32■□□□□ 0.04
TOM1L1-223ENST00000576932 CCDC18Q5T9S5 1454 aa15.32■□□□□ 0.04
TOM1L1-223ENST00000576932 CPS1P31327 1500 aa15.32■□□□□ 0.04
TOM1L1-223ENST00000576932 PLXNC1O60486 1568 aa15.32■□□□□ 0.04
TOM1L1-223ENST00000576932 SUPT6HQ7KZ85 1726 aaKnown RBP15.31■□□□□ 0.04
TOM1L1-223ENST00000576932 TOM1O60784 492 aa15.31■□□□□ 0.04
TOM1L1-223ENST00000576932 HSPA1LP34931 641 aa15.3■□□□□ 0.04
TOM1L1-223ENST00000576932 CLTCQ00610 1675 aaKnown RBP15.3■□□□□ 0.04
TOM1L1-223ENST00000576932 CDC42BPAQ5VT25 1732 aa15.29■□□□□ 0.04
TOM1L1-223ENST00000576932 SPAG9O60271 1321 aaKnown RBP15.29■□□□□ 0.04
TOM1L1-223ENST00000576932 A2ML1A8K2U0 1454 aa15.28■□□□□ 0.04
TOM1L1-223ENST00000576932 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
TOM1L1-223ENST00000576932 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
TOM1L1-223ENST00000576932 ATP7AQ04656 1500 aa15.27■□□□□ 0.04
TOM1L1-223ENST00000576932 A2MP01023 1474 aa15.27■□□□□ 0.04
TOM1L1-223ENST00000576932 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
TOM1L1-223ENST00000576932 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
TOM1L1-223ENST00000576932 INO80Q9ULG1 1556 aaPredicted RBP15.26■□□□□ 0.03
TOM1L1-223ENST00000576932 SYCP2Q9BX26 1530 aa15.26■□□□□ 0.03
TOM1L1-223ENST00000576932 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
TOM1L1-223ENST00000576932 DNMT1P26358 1616 aaKnown RBP15.25■□□□□ 0.03
TOM1L1-223ENST00000576932 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
TOM1L1-223ENST00000576932 PIP4K2BP78356 416 aa15.24■□□□□ 0.03
TOM1L1-223ENST00000576932 POLR1AO95602 1720 aaPredicted RBP15.23■□□□□ 0.03
TOM1L1-223ENST00000576932 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
TOM1L1-223ENST00000576932 NEURL4Q96JN8 1562 aa15.22■□□□□ 0.03
TOM1L1-223ENST00000576932 GGT6Q6P531 493 aa15.21■□□□□ 0.03
TOM1L1-223ENST00000576932 ADGBQ8N7X0 1667 aa15.2■□□□□ 0.02
TOM1L1-223ENST00000576932 HNRNPMP52272 730 aaKnown RBP eCLIP15.2■□□□□ 0.02
TOM1L1-223ENST00000576932 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
TOM1L1-223ENST00000576932 FAM135AQ9P2D6 1515 aa15.2■□□□□ 0.02
TOM1L1-223ENST00000576932 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
TOM1L1-223ENST00000576932 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
TOM1L1-223ENST00000576932 FYCO1Q9BQS8 1478 aa15.18■□□□□ 0.02
TOM1L1-223ENST00000576932 VWDEQ8N2E2 1590 aa15.18■□□□□ 0.02
TOM1L1-223ENST00000576932 ALKQ9UM73 1620 aa15.17■□□□□ 0.02
TOM1L1-223ENST00000576932 MED14O60244 1454 aa15.17■□□□□ 0.02
TOM1L1-223ENST00000576932 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
TOM1L1-223ENST00000576932 TNRQ92752 1358 aa15.16■□□□□ 0.02
TOM1L1-223ENST00000576932 ANKLE2Q86XL3 938 aa15.16■□□□□ 0.02
TOM1L1-223ENST00000576932 PZPP20742 1482 aa15.15■□□□□ 0.02
TOM1L1-223ENST00000576932 DEPDC5O75140 1603 aa15.15■□□□□ 0.02
TOM1L1-223ENST00000576932 SPDYE1Q8NFV5 336 aaPredicted RBP15.15■□□□□ 0.02
TOM1L1-223ENST00000576932 CFDP1Q9UEE9 299 aaPredicted RBP15.15■□□□□ 0.02
TOM1L1-223ENST00000576932 RTEL1-TNFRSF6BF6WH68 1400 aa15.15■□□□□ 0.02
TOM1L1-223ENST00000576932 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
TOM1L1-223ENST00000576932 THEMISQ8N1K5 641 aaPredicted RBP15.13■□□□□ 0.01
TOM1L1-223ENST00000576932 DHX29Q7Z478 1369 aaKnown RBP15.12■□□□□ 0.01
TOM1L1-223ENST00000576932 NPHP4O75161 1426 aaPredicted RBP15.12■□□□□ 0.01
TOM1L1-223ENST00000576932 KDM5DQ9BY66 1539 aa15.12■□□□□ 0.01
TOM1L1-223ENST00000576932 CCNB3Q8WWL7 1395 aa15.11■□□□□ 0.01
TOM1L1-223ENST00000576932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
TOM1L1-223ENST00000576932 SYNMO15061 1565 aa15.11■□□□□ 0.01
TOM1L1-223ENST00000576932 RNF17Q9BXT8 1623 aaKnown RBP15.1■□□□□ 0.01
TOM1L1-223ENST00000576932 UGGT1Q9NYU2 1555 aa15.1■□□□□ 0.01
TOM1L1-223ENST00000576932 MIA2Q96PC5 1412 aa15.09■□□□□ 0.01
TOM1L1-223ENST00000576932 MBD5Q9P267 1494 aa15.09■□□□□ 0.01
TOM1L1-223ENST00000576932 FBXO31Q5XUX0 539 aaPredicted RBP15.09■□□□□ 0.01
TOM1L1-223ENST00000576932 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
TOM1L1-223ENST00000576932 LRRC7Q96NW7 1537 aa15.08■□□□□ 0.01
TOM1L1-223ENST00000576932 PLCD3Q8N3E9 789 aa15.06■□□□□ 0
TOM1L1-223ENST00000576932 RGS17Q9UGC6 210 aaPredicted RBP15.06■□□□□ 0
TOM1L1-223ENST00000576932 WASHC2CQ9Y4E1 1318 aa15.05■□□□□ -0
TOM1L1-223ENST00000576932 KIF3BO15066 747 aa15.04■□□□□ -0
TOM1L1-223ENST00000576932 STRCP1A6NGW2 1772 aa15.03■□□□□ -0
TOM1L1-223ENST00000576932 MTUS2Q5JR59 1369 aa15.03■□□□□ -0
TOM1L1-223ENST00000576932 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
TOM1L1-223ENST00000576932 TIAM1Q13009 1591 aa15.02■□□□□ -0
TOM1L1-223ENST00000576932 RSPH4AQ5TD94 716 aa15.02■□□□□ -0
TOM1L1-223ENST00000576932 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
TOM1L1-223ENST00000576932 ZNF644Q9H582 1327 aaPredicted RBP15.01□□□□□ -0.01
TOM1L1-223ENST00000576932 MIER1Q8N108 512 aa15.01□□□□□ -0.01
TOM1L1-223ENST00000576932 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
TOM1L1-223ENST00000576932 KLHL34Q8N239 644 aa15□□□□□ -0.01
TOM1L1-223ENST00000576932 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
TOM1L1-223ENST00000576932 ZC3H13Q5T200 1668 aaKnown RBP15□□□□□ -0.01
TOM1L1-223ENST00000576932 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
TOM1L1-223ENST00000576932 FAM135BQ49AJ0 1406 aa14.98□□□□□ -0.01
TOM1L1-223ENST00000576932 CEP162Q5TB80 1403 aa14.98□□□□□ -0.01
TOM1L1-223ENST00000576932 SCAF11Q99590 1463 aaKnown RBP14.95□□□□□ -0.02
TOM1L1-223ENST00000576932 PRR29P0C7W0 189 aa14.95□□□□□ -0.02
TOM1L1-223ENST00000576932 ERVK-7P63135 1459 aa14.95□□□□□ -0.02
TOM1L1-223ENST00000576932 ABCC3O15438 1527 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms