RNA–Protein interactions for RNA: ENST00000573001.5

TNFRSF12A-204, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3 BASIC

Gene TNFRSF12A, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-204ENST00000573001 ADGBQ8N7X0 1667 aa20.52■□□□□ 0.88
TNFRSF12A-204ENST00000573001 TNRQ92752 1358 aa20.52■□□□□ 0.88
TNFRSF12A-204ENST00000573001 FBXO31Q5XUX0 539 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF12A-204ENST00000573001 MED14O60244 1454 aa20.5■□□□□ 0.87
TNFRSF12A-204ENST00000573001 ANKLE2Q86XL3 938 aa20.49■□□□□ 0.87
TNFRSF12A-204ENST00000573001 PZPP20742 1482 aa20.49■□□□□ 0.87
TNFRSF12A-204ENST00000573001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.48■□□□□ 0.873e-6■■□□□ 13.5
TNFRSF12A-204ENST00000573001 DHX29Q7Z478 1369 aaKnown RBP20.47■□□□□ 0.87
TNFRSF12A-204ENST00000573001 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
TNFRSF12A-204ENST00000573001 MBD5Q9P267 1494 aa20.47■□□□□ 0.87
TNFRSF12A-204ENST00000573001 RTEL1-TNFRSF6BF6WH68 1400 aa20.46■□□□□ 0.87
TNFRSF12A-204ENST00000573001 DEPDC5O75140 1603 aa20.45■□□□□ 0.87
TNFRSF12A-204ENST00000573001 NPHP4O75161 1426 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF12A-204ENST00000573001 FAM135AQ9P2D6 1515 aa20.45■□□□□ 0.86
TNFRSF12A-204ENST00000573001 THEMISQ8N1K5 641 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF12A-204ENST00000573001 RGS17Q9UGC6 210 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF12A-204ENST00000573001 ZNF644Q9H582 1327 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF12A-204ENST00000573001 MIA2Q96PC5 1412 aa20.44■□□□□ 0.86
TNFRSF12A-204ENST00000573001 NLRP1Q9C000 1473 aa20.43■□□□□ 0.86
TNFRSF12A-204ENST00000573001 KDM5DQ9BY66 1539 aa20.43■□□□□ 0.86
TNFRSF12A-204ENST00000573001 LRRC7Q96NW7 1537 aa20.42■□□□□ 0.86
TNFRSF12A-204ENST00000573001 UGGT1Q9NYU2 1555 aa20.41■□□□□ 0.86
TNFRSF12A-204ENST00000573001 STRCP1A6NGW2 1772 aa20.4■□□□□ 0.86
TNFRSF12A-204ENST00000573001 KIF3BO15066 747 aa20.4■□□□□ 0.86
TNFRSF12A-204ENST00000573001 IQGAP1P46940 1657 aa20.38■□□□□ 0.85
TNFRSF12A-204ENST00000573001 RNF17Q9BXT8 1623 aaKnown RBP20.38■□□□□ 0.85
TNFRSF12A-204ENST00000573001 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
TNFRSF12A-204ENST00000573001 SYNMO15061 1565 aa20.36■□□□□ 0.85
TNFRSF12A-204ENST00000573001 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
TNFRSF12A-204ENST00000573001 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF12A-204ENST00000573001 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
TNFRSF12A-204ENST00000573001 CCDC141Q6ZP82 1450 aa20.3■□□□□ 0.84
TNFRSF12A-204ENST00000573001 ZC3H13Q5T200 1668 aaKnown RBP20.29■□□□□ 0.84
TNFRSF12A-204ENST00000573001 CEP162Q5TB80 1403 aa20.27■□□□□ 0.84
TNFRSF12A-204ENST00000573001 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
TNFRSF12A-204ENST00000573001 POTEAQ6S8J7 498 aa20.27■□□□□ 0.84
TNFRSF12A-204ENST00000573001 RSPH4AQ5TD94 716 aa20.25■□□□□ 0.83
TNFRSF12A-204ENST00000573001 EHBP1L1Q8N3D4 1523 aa20.25■□□□□ 0.83
TNFRSF12A-204ENST00000573001 FAM135BQ49AJ0 1406 aa20.24■□□□□ 0.83
TNFRSF12A-204ENST00000573001 ABCC3O15438 1527 aa20.23■□□□□ 0.83
TNFRSF12A-204ENST00000573001 ERVK-7P63135 1459 aa20.23■□□□□ 0.83
TNFRSF12A-204ENST00000573001 XIRP1Q702N8 1843 aaKnown RBP20.23■□□□□ 0.83
TNFRSF12A-204ENST00000573001 CAMSAP2Q08AD1 1489 aa20.22■□□□□ 0.83
TNFRSF12A-204ENST00000573001 SCAF11Q99590 1463 aaKnown RBP20.22■□□□□ 0.83
TNFRSF12A-204ENST00000573001 NCOA2Q15596 1464 aa20.2■□□□□ 0.82
TNFRSF12A-204ENST00000573001 ARHGAP23Q9P227 1491 aa20.2■□□□□ 0.82
TNFRSF12A-204ENST00000573001 LTKP29376 864 aa20.2■□□□□ 0.82
TNFRSF12A-204ENST00000573001 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
TNFRSF12A-204ENST00000573001 SLIT1O75093 1534 aa20.18■□□□□ 0.82
TNFRSF12A-204ENST00000573001 ARHGEF5Q12774 1597 aa20.17■□□□□ 0.82
TNFRSF12A-204ENST00000573001 MROH1Q8NDA8 1641 aa20.14■□□□□ 0.81
TNFRSF12A-204ENST00000573001 TSPY4P0CV99 314 aa20.14■□□□□ 0.81
TNFRSF12A-204ENST00000573001 TSPY10P0CW01 314 aa20.14■□□□□ 0.81
TNFRSF12A-204ENST00000573001 TXNDC2Q86VQ3 553 aa20.14■□□□□ 0.81
TNFRSF12A-204ENST00000573001 EIF2AK4Q9P2K8 1649 aaKnown RBP20.11■□□□□ 0.81
TNFRSF12A-204ENST00000573001 TMEM94Q12767 1356 aa20.1■□□□□ 0.81
TNFRSF12A-204ENST00000573001 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
TNFRSF12A-204ENST00000573001 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
TNFRSF12A-204ENST00000573001 CFAP65Q6ZU64 1925 aaKnown RBP20.09■□□□□ 0.81
TNFRSF12A-204ENST00000573001 MAP3K1Q13233 1512 aa20.08■□□□□ 0.81
TNFRSF12A-204ENST00000573001 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.81
TNFRSF12A-204ENST00000573001 EID1Q9Y6B2 187 aa20.08■□□□□ 0.81
TNFRSF12A-204ENST00000573001 ARHGAP31Q2M1Z3 1444 aa20.08■□□□□ 0.8
TNFRSF12A-204ENST00000573001 CEP152O94986 1710 aa20.07■□□□□ 0.8
TNFRSF12A-204ENST00000573001 TMEM2Q9UHN6 1383 aa20.07■□□□□ 0.8
TNFRSF12A-204ENST00000573001 KCNA6P17658 529 aa20.05■□□□□ 0.8
TNFRSF12A-204ENST00000573001 LRRC9Q6ZRR7 1453 aa20.04■□□□□ 0.8
TNFRSF12A-204ENST00000573001 TET3O43151 1660 aa20.01■□□□□ 0.79
TNFRSF12A-204ENST00000573001 PIK3C2BO00750 1634 aa20.01■□□□□ 0.79
TNFRSF12A-204ENST00000573001 PRDM15P57071 1507 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF12A-204ENST00000573001 JCADQ9P266 1359 aa20■□□□□ 0.79
TNFRSF12A-204ENST00000573001 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
TNFRSF12A-204ENST00000573001 DUOX2Q9NRD8 1548 aa19.99■□□□□ 0.79
TNFRSF12A-204ENST00000573001 UPF1Q92900 1129 aaKnown RBP eCLIP19.99■□□□□ 0.791e-13■■■■■ 44.9
TNFRSF12A-204ENST00000573001 RBM33Q96EV2 1170 aaKnown RBP19.99■□□□□ 0.79
TNFRSF12A-204ENST00000573001 NKTRP30414 1462 aaKnown RBP19.99■□□□□ 0.79
TNFRSF12A-204ENST00000573001 KDM5AP29375 1690 aaKnown RBP19.98■□□□□ 0.79
TNFRSF12A-204ENST00000573001 NWD1Q149M9 1564 aa19.97■□□□□ 0.79
TNFRSF12A-204ENST00000573001 EFCAB6Q5THR3 1501 aa19.97■□□□□ 0.79
TNFRSF12A-204ENST00000573001 SLC26A8Q96RN1 970 aa19.96■□□□□ 0.79
TNFRSF12A-204ENST00000573001 SLAIN2Q9P270 581 aa19.96■□□□□ 0.79
TNFRSF12A-204ENST00000573001 PHLPP1O60346 1717 aa19.95■□□□□ 0.78
TNFRSF12A-204ENST00000573001 IDI1Q13907 227 aa19.94■□□□□ 0.78
TNFRSF12A-204ENST00000573001 MSH6P52701 1360 aa19.94■□□□□ 0.78
TNFRSF12A-204ENST00000573001 STAG3Q9UJ98 1225 aa19.93■□□□□ 0.78
TNFRSF12A-204ENST00000573001 LRP6O75581 1613 aa19.93■□□□□ 0.78
TNFRSF12A-204ENST00000573001 COL16A1Q07092 1604 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF12A-204ENST00000573001 SRCAPQ6ZRS2 3230 aa19.93■□□□□ 0.78
TNFRSF12A-204ENST00000573001 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
TNFRSF12A-204ENST00000573001 SPATA31A6Q5VVP1 1343 aa19.9■□□□□ 0.78
TNFRSF12A-204ENST00000573001 KIF15Q9NS87 1388 aa19.9■□□□□ 0.78
TNFRSF12A-204ENST00000573001 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
TNFRSF12A-204ENST00000573001 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
TNFRSF12A-204ENST00000573001 ZNF772Q68DY9 489 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF12A-204ENST00000573001 LMTK2Q8IWU2 1503 aa19.87■□□□□ 0.77
TNFRSF12A-204ENST00000573001 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
TNFRSF12A-204ENST00000573001 NOS1P29475 1434 aa19.85■□□□□ 0.77
TNFRSF12A-204ENST00000573001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.85■□□□□ 0.77
TNFRSF12A-204ENST00000573001 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
TNFRSF12A-204ENST00000573001 NCOA3Q9Y6Q9 1424 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms