RNA–Protein interactions for RNA: ENST00000569129.5

CPT1A-209, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-209ENST00000569129 FBXO31Q5XUX0 539 aaPredicted RBP17.38■□□□□ 0.37
CPT1A-209ENST00000569129 TNRQ92752 1358 aa17.38■□□□□ 0.37
CPT1A-209ENST00000569129 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
CPT1A-209ENST00000569129 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
CPT1A-209ENST00000569129 ALKQ9UM73 1620 aa17.37■□□□□ 0.37
CPT1A-209ENST00000569129 VWDEQ8N2E2 1590 aa17.36■□□□□ 0.37
CPT1A-209ENST00000569129 DHX29Q7Z478 1369 aaKnown RBP17.35■□□□□ 0.37
CPT1A-209ENST00000569129 RTEL1-TNFRSF6BF6WH68 1400 aa17.34■□□□□ 0.37
CPT1A-209ENST00000569129 PZPP20742 1482 aa17.34■□□□□ 0.37
CPT1A-209ENST00000569129 TIAM1Q13009 1591 aa17.34■□□□□ 0.37
CPT1A-209ENST00000569129 MTUS2Q5JR59 1369 aa17.33■□□□□ 0.36
CPT1A-209ENST00000569129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
CPT1A-209ENST00000569129 KIF3BO15066 747 aa17.31■□□□□ 0.36
CPT1A-209ENST00000569129 KDM5DQ9BY66 1539 aa17.31■□□□□ 0.36
CPT1A-209ENST00000569129 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
CPT1A-209ENST00000569129 MED14O60244 1454 aa17.3■□□□□ 0.36
CPT1A-209ENST00000569129 NPHP4O75161 1426 aaPredicted RBP17.29■□□□□ 0.36
CPT1A-209ENST00000569129 MIA2Q96PC5 1412 aa17.29■□□□□ 0.36
CPT1A-209ENST00000569129 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
CPT1A-209ENST00000569129 NLRP1Q9C000 1473 aa17.27■□□□□ 0.36
CPT1A-209ENST00000569129 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
CPT1A-209ENST00000569129 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
CPT1A-209ENST00000569129 DEPDC5O75140 1603 aa17.27■□□□□ 0.36
CPT1A-209ENST00000569129 UGGT1Q9NYU2 1555 aa17.26■□□□□ 0.35
CPT1A-209ENST00000569129 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
CPT1A-209ENST00000569129 WASHC2CQ9Y4E1 1318 aa17.25■□□□□ 0.35
CPT1A-209ENST00000569129 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
CPT1A-209ENST00000569129 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
CPT1A-209ENST00000569129 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
CPT1A-209ENST00000569129 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
CPT1A-209ENST00000569129 IQGAP1P46940 1657 aa17.23■□□□□ 0.35
CPT1A-209ENST00000569129 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
CPT1A-209ENST00000569129 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
CPT1A-209ENST00000569129 RNF17Q9BXT8 1623 aaKnown RBP17.2■□□□□ 0.34
CPT1A-209ENST00000569129 RGS17Q9UGC6 210 aaPredicted RBP17.19■□□□□ 0.34
CPT1A-209ENST00000569129 SYNMO15061 1565 aa17.18■□□□□ 0.34
CPT1A-209ENST00000569129 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
CPT1A-209ENST00000569129 ZC3H13Q5T200 1668 aaKnown RBP17.16■□□□□ 0.34
CPT1A-209ENST00000569129 ABCC3O15438 1527 aa17.16■□□□□ 0.34
CPT1A-209ENST00000569129 RSPH4AQ5TD94 716 aa17.16■□□□□ 0.34
CPT1A-209ENST00000569129 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
CPT1A-209ENST00000569129 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
CPT1A-209ENST00000569129 MROH1Q8NDA8 1641 aa17.11■□□□□ 0.33
CPT1A-209ENST00000569129 SCAF11Q99590 1463 aaKnown RBP17.11■□□□□ 0.33
CPT1A-209ENST00000569129 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
CPT1A-209ENST00000569129 TSPY4P0CV99 314 aa17.1■□□□□ 0.33
CPT1A-209ENST00000569129 TSPY10P0CW01 314 aa17.1■□□□□ 0.33
CPT1A-209ENST00000569129 LTKP29376 864 aa17.1■□□□□ 0.33
CPT1A-209ENST00000569129 XIRP1Q702N8 1843 aaKnown RBP17.1■□□□□ 0.33
CPT1A-209ENST00000569129 ARHGAP23Q9P227 1491 aa17.09■□□□□ 0.33
CPT1A-209ENST00000569129 MAST1Q9Y2H9 1570 aa17.08■□□□□ 0.32
CPT1A-209ENST00000569129 SLIT1O75093 1534 aa17.07■□□□□ 0.32
CPT1A-209ENST00000569129 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
CPT1A-209ENST00000569129 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
CPT1A-209ENST00000569129 CEP152O94986 1710 aa17.06■□□□□ 0.32
CPT1A-209ENST00000569129 TXNDC2Q86VQ3 553 aa17.05■□□□□ 0.32
CPT1A-209ENST00000569129 CFAP65Q6ZU64 1925 aaKnown RBP17.05■□□□□ 0.32
CPT1A-209ENST00000569129 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
CPT1A-209ENST00000569129 ARHGAP31Q2M1Z3 1444 aa17■□□□□ 0.31
CPT1A-209ENST00000569129 TMEM94Q12767 1356 aa17■□□□□ 0.31
CPT1A-209ENST00000569129 TMEM2Q9UHN6 1383 aa16.99■□□□□ 0.31
CPT1A-209ENST00000569129 PRDM15P57071 1507 aaPredicted RBP16.98■□□□□ 0.31
CPT1A-209ENST00000569129 MAP3K1Q13233 1512 aa16.98■□□□□ 0.31
CPT1A-209ENST00000569129 DUOX2Q9NRD8 1548 aa16.98■□□□□ 0.31
CPT1A-209ENST00000569129 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
CPT1A-209ENST00000569129 PIK3C2BO00750 1634 aa16.98■□□□□ 0.31
CPT1A-209ENST00000569129 LRRC9Q6ZRR7 1453 aa16.98■□□□□ 0.31
CPT1A-209ENST00000569129 ROBO1Q9Y6N7 1651 aa16.96■□□□□ 0.31
CPT1A-209ENST00000569129 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
CPT1A-209ENST00000569129 KCNA6P17658 529 aa16.94■□□□□ 0.3
CPT1A-209ENST00000569129 TET3O43151 1660 aa16.94■□□□□ 0.3
CPT1A-209ENST00000569129 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
CPT1A-209ENST00000569129 MYOM3Q5VTT5 1437 aa16.93■□□□□ 0.3
CPT1A-209ENST00000569129 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
CPT1A-209ENST00000569129 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
CPT1A-209ENST00000569129 SLC26A8Q96RN1 970 aa16.92■□□□□ 0.3
CPT1A-209ENST00000569129 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
CPT1A-209ENST00000569129 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
CPT1A-209ENST00000569129 IDI1Q13907 227 aa16.91■□□□□ 0.3
CPT1A-209ENST00000569129 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
CPT1A-209ENST00000569129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.37e-6■□□□□ 10.8
CPT1A-209ENST00000569129 KDM5AP29375 1690 aaKnown RBP16.9■□□□□ 0.3
CPT1A-209ENST00000569129 ABCC5O15440 1437 aa16.89■□□□□ 0.29
CPT1A-209ENST00000569129 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.29
CPT1A-209ENST00000569129 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
CPT1A-209ENST00000569129 NWD1Q149M9 1564 aa16.89■□□□□ 0.29
CPT1A-209ENST00000569129 VPS8Q8N3P4 1428 aa16.88■□□□□ 0.29
CPT1A-209ENST00000569129 NKTRP30414 1462 aaKnown RBP16.88■□□□□ 0.29
CPT1A-209ENST00000569129 LMTK2Q8IWU2 1503 aa16.86■□□□□ 0.29
CPT1A-209ENST00000569129 CROCC2H7BZ55 1655 aa16.86■□□□□ 0.29
CPT1A-209ENST00000569129 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
CPT1A-209ENST00000569129 SLAIN2Q9P270 581 aa16.85■□□□□ 0.29
CPT1A-209ENST00000569129 MSH6P52701 1360 aa16.85■□□□□ 0.29
CPT1A-209ENST00000569129 JCADQ9P266 1359 aa16.85■□□□□ 0.29
CPT1A-209ENST00000569129 NOS1P29475 1434 aa16.85■□□□□ 0.29
CPT1A-209ENST00000569129 KANK1Q14678 1352 aa16.84■□□□□ 0.29
CPT1A-209ENST00000569129 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
CPT1A-209ENST00000569129 LRP6O75581 1613 aa16.82■□□□□ 0.28
CPT1A-209ENST00000569129 COL16A1Q07092 1604 aaPredicted RBP16.82■□□□□ 0.28
CPT1A-209ENST00000569129 DAPK1P53355 1430 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms