RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 WDR7Q9Y4E6 1490 aa7.79□□□□□ -1.16
CNOT1-211ENST00000567188 HSP90AA2PQ14568 343 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-211ENST00000567188 NUP153P49790 1475 aaKnown RBP7.79□□□□□ -1.16
CNOT1-211ENST00000567188 DAPK1P53355 1430 aa7.79□□□□□ -1.16
CNOT1-211ENST00000567188 FANCAO15360 1455 aa7.79□□□□□ -1.16
CNOT1-211ENST00000567188 FAM9BQ8IZU0 186 aa7.79□□□□□ -1.16
CNOT1-211ENST00000567188 RBM33Q96EV2 1170 aaKnown RBP7.79□□□□□ -1.16
CNOT1-211ENST00000567188 VSIG10Q8N0Z9 540 aa7.79□□□□□ -1.16
CNOT1-211ENST00000567188 SUPT16HQ9Y5B9 1047 aaKnown RBP7.79□□□□□ -1.16
CNOT1-211ENST00000567188 C9orf84Q5VXU9 1444 aa7.78□□□□□ -1.16
CNOT1-211ENST00000567188 DCAF8L1A6NGE4 600 aa7.78□□□□□ -1.16
CNOT1-211ENST00000567188 ROCK2O75116 1388 aaKnown RBP7.78□□□□□ -1.16
CNOT1-211ENST00000567188 SRPK2P78362 688 aaKnown RBP7.77□□□□□ -1.17
CNOT1-211ENST00000567188 PNNQ9H307 717 aaKnown RBP7.77□□□□□ -1.17
CNOT1-211ENST00000567188 MYO5CQ9NQX4 1742 aa7.77□□□□□ -1.17
CNOT1-211ENST00000567188 SAMD9Q5K651 1589 aa7.77□□□□□ -1.17
CNOT1-211ENST00000567188 TROQ12816 1431 aaPredicted RBP7.77□□□□□ -1.17
CNOT1-211ENST00000567188 ADCY10Q96PN6 1610 aa7.77□□□□□ -1.17
CNOT1-211ENST00000567188 KIF15Q9NS87 1388 aa7.76□□□□□ -1.17
CNOT1-211ENST00000567188 PIP4K2BP78356 416 aa7.76□□□□□ -1.17
CNOT1-211ENST00000567188 ABCC2Q92887 1545 aa7.76□□□□□ -1.17
CNOT1-211ENST00000567188 TTC37Q6PGP7 1564 aa7.76□□□□□ -1.17
CNOT1-211ENST00000567188 TRAK1Q9UPV9 953 aa7.76□□□□□ -1.17
CNOT1-211ENST00000567188 NUP160Q12769 1436 aa7.76□□□□□ -1.17
CNOT1-211ENST00000567188 GOLGA6L22H0YM25 854 aa7.75□□□□□ -1.17
CNOT1-211ENST00000567188 RBM19Q9Y4C8 960 aaKnown RBP7.75□□□□□ -1.17
CNOT1-211ENST00000567188 CCDC136Q96JN2 1154 aa7.75□□□□□ -1.17
CNOT1-211ENST00000567188 MAGI3Q5TCQ9 1506 aa7.75□□□□□ -1.17
CNOT1-211ENST00000567188 AKNAQ7Z591 1439 aa7.74□□□□□ -1.17
CNOT1-211ENST00000567188 PPP4R2Q9NY27 417 aa7.74□□□□□ -1.17
CNOT1-211ENST00000567188 CALRP27797 417 aaKnown RBP7.74□□□□□ -1.17
CNOT1-211ENST00000567188 EID1Q9Y6B2 187 aa7.74□□□□□ -1.17
CNOT1-211ENST00000567188 TSHZ2Q9NRE2 1034 aa7.74□□□□□ -1.17
CNOT1-211ENST00000567188 FBXO31Q5XUX0 539 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-211ENST00000567188 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-211ENST00000567188 HSPA5P11021 654 aaKnown RBP7.73□□□□□ -1.17
CNOT1-211ENST00000567188 RTN4Q9NQC3 1192 aaKnown RBP7.72□□□□□ -1.17
CNOT1-211ENST00000567188 FANCIQ9NVI1 1328 aa7.72□□□□□ -1.17
CNOT1-211ENST00000567188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.72□□□□□ -1.17
CNOT1-211ENST00000567188 TMEM132EQ6IEE7 984 aa7.72□□□□□ -1.17
CNOT1-211ENST00000567188 MAP7D2Q96T17 732 aa7.72□□□□□ -1.17
CNOT1-211ENST00000567188 NUTM2GQ5VZR2 741 aa7.72□□□□□ -1.17
CNOT1-211ENST00000567188 TIMELESSQ9UNS1 1208 aa7.72□□□□□ -1.17
CNOT1-211ENST00000567188 CANXP27824 592 aaKnown RBP7.71□□□□□ -1.17
CNOT1-211ENST00000567188 CCDC9Q9Y3X0 531 aaKnown RBP7.71□□□□□ -1.17
CNOT1-211ENST00000567188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.71□□□□□ -1.18
CNOT1-211ENST00000567188 CLASP1Q7Z460 1538 aa7.71□□□□□ -1.18
CNOT1-211ENST00000567188 MTERF4Q7Z6M4 381 aaKnown RBP7.71□□□□□ -1.18
CNOT1-211ENST00000567188 TNNT3P45378 269 aaPredicted RBP7.71□□□□□ -1.18
CNOT1-211ENST00000567188 MEX3CQ5U5Q3 659 aaKnown RBP7.7□□□□□ -1.18
CNOT1-211ENST00000567188 ABCC5O15440 1437 aa7.7□□□□□ -1.18
CNOT1-211ENST00000567188 MINK1Q8N4C8 1332 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-211ENST00000567188 ADGBQ8N7X0 1667 aa7.7□□□□□ -1.18
CNOT1-211ENST00000567188 EIF4G2P78344 907 aaKnown RBP eCLIP7.7□□□□□ -1.186e-11■■■■□ 25.1
CNOT1-211ENST00000567188 TRAPPC8Q9Y2L5 1435 aa7.7□□□□□ -1.18
CNOT1-211ENST00000567188 ABCA8O94911 1581 aa7.69□□□□□ -1.18
CNOT1-211ENST00000567188 CCDC144AA2RUR9 1427 aa7.69□□□□□ -1.18
CNOT1-211ENST00000567188 CCDC141Q6ZP82 1450 aa7.69□□□□□ -1.18
CNOT1-211ENST00000567188 ARXQ96QS3 562 aa7.68□□□□□ -1.18
CNOT1-211ENST00000567188 CFAP74Q9C0B2 1584 aa7.68□□□□□ -1.18
CNOT1-211ENST00000567188 DENND4BO75064 1496 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-211ENST00000567188 A0A0U1RQG5 324 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-211ENST00000567188 CHAF1AQ13111 956 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-211ENST00000567188 NCBP3Q53F19 620 aaKnown RBP7.68□□□□□ -1.18
CNOT1-211ENST00000567188 SAMD9LQ8IVG5 1584 aa7.68□□□□□ -1.18
CNOT1-211ENST00000567188 ANKRD50Q9ULJ7 1429 aa7.68□□□□□ -1.18
CNOT1-211ENST00000567188 GPATCH8Q9UKJ3 1502 aaKnown RBP7.68□□□□□ -1.18
CNOT1-211ENST00000567188 MIER1Q8N108 512 aa7.67□□□□□ -1.18
CNOT1-211ENST00000567188 MSNP26038 577 aaKnown RBP7.67□□□□□ -1.18
CNOT1-211ENST00000567188 NCKAP5LQ9HCH0 1330 aa7.67□□□□□ -1.18
CNOT1-211ENST00000567188 L3MBTL2Q969R5 705 aa7.67□□□□□ -1.18
CNOT1-211ENST00000567188 ERBINQ96RT1 1412 aa7.67□□□□□ -1.18
CNOT1-211ENST00000567188 GOLGA6L3A6NEY3 463 aa7.67□□□□□ -1.18
CNOT1-211ENST00000567188 XPCQ01831 940 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-211ENST00000567188 DHX57Q6P158 1386 aaKnown RBP7.67□□□□□ -1.18
CNOT1-211ENST00000567188 HDGFP51858 240 aaKnown RBP7.66□□□□□ -1.18
CNOT1-211ENST00000567188 LTV1Q96GA3 475 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-211ENST00000567188 NEUROD2Q15784 382 aa7.66□□□□□ -1.18
CNOT1-211ENST00000567188 CFAP65Q6ZU64 1925 aaKnown RBP7.66□□□□□ -1.18
CNOT1-211ENST00000567188 KDM6BO15054 1643 aa7.66□□□□□ -1.18
CNOT1-211ENST00000567188 CDC42BPAQ5VT25 1732 aa7.66□□□□□ -1.18
CNOT1-211ENST00000567188 NUTM2BA6NNL0 878 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-211ENST00000567188 NUTM2EB1AL46 878 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-211ENST00000567188 NUTM2AQ8IVF1 878 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-211ENST00000567188 CABP2Q9NPB3 220 aa7.65□□□□□ -1.18
CNOT1-211ENST00000567188 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-211ENST00000567188 IRX6P78412 446 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-211ENST00000567188 WDR43Q15061 677 aaKnown RBP eCLIP7.65□□□□□ -1.18
CNOT1-211ENST00000567188 TXNDC2Q86VQ3 553 aa7.65□□□□□ -1.18
CNOT1-211ENST00000567188 RRBP1Q9P2E9 1410 aaKnown RBP7.65□□□□□ -1.18
CNOT1-211ENST00000567188 TEX14Q8IWB6 1497 aa7.65□□□□□ -1.19
CNOT1-211ENST00000567188 HNRNPUQ00839 825 aaKnown RBP eCLIP7.65□□□□□ -1.19
CNOT1-211ENST00000567188 FAM135AQ9P2D6 1515 aa7.65□□□□□ -1.19
CNOT1-211ENST00000567188 PLCH2O75038 1416 aa7.65□□□□□ -1.19
CNOT1-211ENST00000567188 PLEKHH2Q8IVE3 1493 aa7.64□□□□□ -1.19
CNOT1-211ENST00000567188 PTPRKQ15262 1439 aa7.64□□□□□ -1.19
CNOT1-211ENST00000567188 HSPA2P54652 639 aa7.64□□□□□ -1.19
CNOT1-211ENST00000567188 TAF3Q5VWG9 929 aa7.64□□□□□ -1.19
CNOT1-211ENST00000567188 PREX2Q70Z35 1606 aa7.64□□□□□ -1.19
CNOT1-211ENST00000567188 NPHP1O15259 732 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms