RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.16■■□□□ 1.94
CDH5-204ENST00000563425 FANCAO15360 1455 aa27.14■■□□□ 1.94
CDH5-204ENST00000563425 ASXL2Q76L83 1435 aa27.14■■□□□ 1.94
CDH5-204ENST00000563425 OSCARQ8IYS5 282 aa27.14■■□□□ 1.93
CDH5-204ENST00000563425 ATP10AO60312 1499 aa27.13■■□□□ 1.93
CDH5-204ENST00000563425 SPAG9O60271 1321 aaKnown RBP27.13■■□□□ 1.93
CDH5-204ENST00000563425 INO80Q9ULG1 1556 aaPredicted RBP27.13■■□□□ 1.93
CDH5-204ENST00000563425 DCAF11Q8TEB1 546 aa27.1■■□□□ 1.93
CDH5-204ENST00000563425 DEPDC5O75140 1603 aa27.1■■□□□ 1.93
CDH5-204ENST00000563425 TRPM1Q7Z4N2 1603 aa27.1■■□□□ 1.93
CDH5-204ENST00000563425 AFAP1Q8N556 730 aa27.09■■□□□ 1.93
CDH5-204ENST00000563425 ATP7AQ04656 1500 aa27.08■■□□□ 1.93
CDH5-204ENST00000563425 KDM2AQ9Y2K7 1162 aa27.07■■□□□ 1.92
CDH5-204ENST00000563425 E9PCH4 1651 aa27.06■■□□□ 1.92
CDH5-204ENST00000563425 ARID4BQ4LE39 1312 aaPredicted RBP27.06■■□□□ 1.92
CDH5-204ENST00000563425 CARD11Q9BXL7 1154 aa27.05■■□□□ 1.92
CDH5-204ENST00000563425 ADGRL1O94910 1474 aa27.05■■□□□ 1.92
CDH5-204ENST00000563425 PRAG1Q86YV5 1406 aa27.04■■□□□ 1.92
CDH5-204ENST00000563425 A2MP01023 1474 aa27.03■■□□□ 1.92
CDH5-204ENST00000563425 PRKRIP1Q9H875 184 aaPredicted RBP27.02■■□□□ 1.92
CDH5-204ENST00000563425 SCAPERQ9BY12 1400 aa27.01■■□□□ 1.91
CDH5-204ENST00000563425 EIF2AK4Q9P2K8 1649 aaKnown RBP27■■□□□ 1.91
CDH5-204ENST00000563425 LAMC1P11047 1609 aa27■■□□□ 1.91
CDH5-204ENST00000563425 TET3O43151 1660 aa26.99■■□□□ 1.91
CDH5-204ENST00000563425 SPHKAPQ2M3C7 1700 aa26.98■■□□□ 1.91
CDH5-204ENST00000563425 ROCK2O75116 1388 aaKnown RBP26.97■■□□□ 1.91
CDH5-204ENST00000563425 VWDEQ8N2E2 1590 aa26.96■■□□□ 1.91
CDH5-204ENST00000563425 NPM1P06748 294 aaKnown RBP eCLIP26.96■■□□□ 1.91
CDH5-204ENST00000563425 SUPT16HQ9Y5B9 1047 aaKnown RBP26.96■■□□□ 1.91
CDH5-204ENST00000563425 RGL3Q3MIN7 710 aa26.95■■□□□ 1.9
CDH5-204ENST00000563425 CEP152O94986 1710 aa26.95■■□□□ 1.9
CDH5-204ENST00000563425 CFAP74Q9C0B2 1584 aa26.95■■□□□ 1.9
CDH5-204ENST00000563425 KIDINS220Q9ULH0 1771 aa26.95■■□□□ 1.9
CDH5-204ENST00000563425 DHX29Q7Z478 1369 aaKnown RBP26.94■■□□□ 1.9
CDH5-204ENST00000563425 TRPM2O94759 1503 aa26.94■■□□□ 1.9
CDH5-204ENST00000563425 GPRASP1Q5JY77 1395 aa26.93■■□□□ 1.9
CDH5-204ENST00000563425 ST20-MTHFSA0A0A6YYL1 179 aa26.91■■□□□ 1.9
CDH5-204ENST00000563425 PRDM15P57071 1507 aaPredicted RBP26.91■■□□□ 1.9
CDH5-204ENST00000563425 MROH1Q8NDA8 1641 aa26.9■■□□□ 1.9
CDH5-204ENST00000563425 PTPRTO14522 1441 aa26.89■■□□□ 1.9
CDH5-204ENST00000563425 CCDC184Q52MB2 194 aa26.89■■□□□ 1.9
CDH5-204ENST00000563425 ZNF518AQ6AHZ1 1483 aa26.89■■□□□ 1.89
CDH5-204ENST00000563425 KANK1Q14678 1352 aa26.87■■□□□ 1.89
CDH5-204ENST00000563425 RNF17Q9BXT8 1623 aaKnown RBP26.87■■□□□ 1.89
CDH5-204ENST00000563425 CLTCL1P53675 1640 aa26.86■■□□□ 1.89
CDH5-204ENST00000563425 POLR3GLQ9BT43 218 aa26.86■■□□□ 1.89
CDH5-204ENST00000563425 CD109Q6YHK3 1445 aa26.85■■□□□ 1.89
CDH5-204ENST00000563425 HNRNPUQ00839 825 aaKnown RBP eCLIP26.84■■□□□ 1.89
CDH5-204ENST00000563425 NBPF1Q3BBV0 1214 aa26.84■■□□□ 1.89
CDH5-204ENST00000563425 MADDQ8WXG6 1647 aa26.83■■□□□ 1.88
CDH5-204ENST00000563425 MRS2Q9HD23 443 aa26.82■■□□□ 1.88
CDH5-204ENST00000563425 MYT1LQ9UL68 1186 aa26.82■■□□□ 1.88
CDH5-204ENST00000563425 KIF3BO15066 747 aa26.82■■□□□ 1.88
CDH5-204ENST00000563425 PELP1Q8IZL8 1130 aaKnown RBP26.8■■□□□ 1.88
CDH5-204ENST00000563425 POGZQ7Z3K3 1410 aa26.79■■□□□ 1.88
CDH5-204ENST00000563425 NEURL4Q96JN8 1562 aa26.78■■□□□ 1.88
CDH5-204ENST00000563425 EFCAB6Q5THR3 1501 aa26.76■■□□□ 1.87
CDH5-204ENST00000563425 HECW2Q9P2P5 1572 aa26.76■■□□□ 1.87
CDH5-204ENST00000563425 MLH3Q9UHC1 1453 aa26.75■■□□□ 1.87
CDH5-204ENST00000563425 IQGAP1P46940 1657 aa26.74■■□□□ 1.87
CDH5-204ENST00000563425 LMTK2Q8IWU2 1503 aa26.74■■□□□ 1.87
CDH5-204ENST00000563425 STAC3Q96MF2 364 aa26.74■■□□□ 1.87
CDH5-204ENST00000563425 COL17A1Q9UMD9 1497 aaPredicted RBP26.74■■□□□ 1.87
CDH5-204ENST00000563425 KIF1BO60333 1816 aa26.74■■□□□ 1.87
CDH5-204ENST00000563425 PPRC1Q5VV67 1664 aaKnown RBP26.74■■□□□ 1.87
CDH5-204ENST00000563425 FAM9BQ8IZU0 186 aa26.72■■□□□ 1.87
CDH5-204ENST00000563425 NEO1Q92859 1461 aa26.71■■□□□ 1.87
CDH5-204ENST00000563425 FRMPD1Q5SYB0 1578 aa26.71■■□□□ 1.87
CDH5-204ENST00000563425 KIAA1210Q9ULL0 1709 aa26.7■■□□□ 1.86
CDH5-204ENST00000563425 TESK2Q96S53 571 aa26.69■■□□□ 1.86
CDH5-204ENST00000563425 FKBP8Q14318 412 aa26.69■■□□□ 1.86
CDH5-204ENST00000563425 ABCA6Q8N139 1617 aa26.69■■□□□ 1.86
CDH5-204ENST00000563425 KTN1Q86UP2 1357 aaKnown RBP26.68■■□□□ 1.86
CDH5-204ENST00000563425 IFT172Q9UG01 1749 aa26.67■■□□□ 1.86
CDH5-204ENST00000563425 NEFLP07196 543 aa26.65■■□□□ 1.86
CDH5-204ENST00000563425 MAP3K4Q9Y6R4 1608 aa26.65■■□□□ 1.86
CDH5-204ENST00000563425 UGGT1Q9NYU2 1555 aa26.64■■□□□ 1.86
CDH5-204ENST00000563425 DISP3Q9P2K9 1392 aa26.64■■□□□ 1.86
CDH5-204ENST00000563425 ZBED9Q6R2W3 1325 aa26.63■■□□□ 1.85
CDH5-204ENST00000563425 MROH2AA6NES4 1674 aa26.62■■□□□ 1.85
CDH5-204ENST00000563425 RICTORQ6R327 1708 aa26.61■■□□□ 1.85
CDH5-204ENST00000563425 CNGB1Q14028 1251 aaPredicted RBP26.61■■□□□ 1.85
CDH5-204ENST00000563425 MYOM2P54296 1465 aa26.6■■□□□ 1.85
CDH5-204ENST00000563425 RALBP1Q15311 655 aa26.6■■□□□ 1.85
CDH5-204ENST00000563425 CFAP65Q6ZU64 1925 aaKnown RBP26.59■■□□□ 1.85
CDH5-204ENST00000563425 TMF1P82094 1093 aa26.58■■□□□ 1.85
CDH5-204ENST00000563425 SCAF11Q99590 1463 aaKnown RBP26.58■■□□□ 1.85
CDH5-204ENST00000563425 GLI2P10070 1586 aa26.57■■□□□ 1.84
CDH5-204ENST00000563425 DIP2CQ9Y2E4 1556 aa26.56■■□□□ 1.84
CDH5-204ENST00000563425 MYBBP1AQ9BQG0 1328 aaKnown RBP26.56■■□□□ 1.84
CDH5-204ENST00000563425 BRD4O60885 1362 aaPredicted RBP26.55■■□□□ 1.84
CDH5-204ENST00000563425 PER1O15534 1290 aaPredicted RBP26.55■■□□□ 1.84
CDH5-204ENST00000563425 ADGRB3O60242 1522 aa26.54■■□□□ 1.84
CDH5-204ENST00000563425 PNISRQ8TF01 805 aaKnown RBP26.53■■□□□ 1.84
CDH5-204ENST00000563425 PARD3Q8TEW0 1356 aa26.53■■□□□ 1.84
CDH5-204ENST00000563425 ABCC3O15438 1527 aa26.53■■□□□ 1.84
CDH5-204ENST00000563425 RIMBP3CA6NJZ7 1639 aa26.53■■□□□ 1.84
CDH5-204ENST00000563425 RIMBP3BA6NNM3 1639 aa26.53■■□□□ 1.84
CDH5-204ENST00000563425 RIMBP3Q9UFD9 1639 aa26.53■■□□□ 1.84
CDH5-204ENST00000563425 NPATQ14207 1427 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms