RNA–Protein interactions for RNA: ENST00000560538.1

GATM-211, Transcript of glycine amidinotransferase, humanhuman

TSL 3

Gene GATM, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-211ENST00000560538 RAPGEF3O95398 923 aa13.54□□□□□ -0.24
GATM-211ENST00000560538 PREX2Q70Z35 1606 aa13.53□□□□□ -0.24
GATM-211ENST00000560538 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
GATM-211ENST00000560538 HS6ST3Q8IZP7 471 aa13.51□□□□□ -0.25
GATM-211ENST00000560538 CDC42BPAQ5VT25 1732 aa13.5□□□□□ -0.25
GATM-211ENST00000560538 ZNF518AQ6AHZ1 1483 aa13.5□□□□□ -0.25
GATM-211ENST00000560538 RIOK3O14730 519 aaKnown RBP13.5□□□□□ -0.25
GATM-211ENST00000560538 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
GATM-211ENST00000560538 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
GATM-211ENST00000560538 CDC42BPBQ9Y5S2 1711 aa13.5□□□□□ -0.25
GATM-211ENST00000560538 KIAA1107Q9UPP5 1409 aa13.49□□□□□ -0.25
GATM-211ENST00000560538 HNRNPMP52272 730 aaKnown RBP eCLIP13.49□□□□□ -0.25
GATM-211ENST00000560538 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
GATM-211ENST00000560538 MYOM3Q5VTT5 1437 aa13.48□□□□□ -0.25
GATM-211ENST00000560538 MIA2Q96PC5 1412 aa13.48□□□□□ -0.25
GATM-211ENST00000560538 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
GATM-211ENST00000560538 MAGI2Q86UL8 1455 aa13.48□□□□□ -0.25
GATM-211ENST00000560538 COL17A1Q9UMD9 1497 aaPredicted RBP13.48□□□□□ -0.25
GATM-211ENST00000560538 POGZQ7Z3K3 1410 aa13.47□□□□□ -0.25
GATM-211ENST00000560538 SPAG9O60271 1321 aaKnown RBP13.47□□□□□ -0.25
GATM-211ENST00000560538 ARID4BQ4LE39 1312 aaPredicted RBP13.47□□□□□ -0.25
GATM-211ENST00000560538 VSIG10Q8N0Z9 540 aa13.47□□□□□ -0.25
GATM-211ENST00000560538 AFAP1Q8N556 730 aa13.47□□□□□ -0.25
GATM-211ENST00000560538 ABCC1P33527 1531 aa13.44□□□□□ -0.26
GATM-211ENST00000560538 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
GATM-211ENST00000560538 FAM50AQ14320 339 aaKnown RBP13.44□□□□□ -0.26
GATM-211ENST00000560538 PPARGC1BQ86YN6 1023 aaKnown RBP13.44□□□□□ -0.26
GATM-211ENST00000560538 ZNF644Q9H582 1327 aaPredicted RBP13.43□□□□□ -0.26
GATM-211ENST00000560538 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
GATM-211ENST00000560538 SAMD9LQ8IVG5 1584 aa13.42□□□□□ -0.26
GATM-211ENST00000560538 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
GATM-211ENST00000560538 ZFYVE16Q7Z3T8 1539 aa13.42□□□□□ -0.26
GATM-211ENST00000560538 SYCP2Q9BX26 1530 aa13.42□□□□□ -0.26
GATM-211ENST00000560538 RICTORQ6R327 1708 aa13.42□□□□□ -0.26
GATM-211ENST00000560538 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
GATM-211ENST00000560538 ZMYM4Q5VZL5 1548 aa13.41□□□□□ -0.26
GATM-211ENST00000560538 PYGBP11216 843 aa13.41□□□□□ -0.26
GATM-211ENST00000560538 TRAPPC8Q9Y2L5 1435 aa13.4□□□□□ -0.26
GATM-211ENST00000560538 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
GATM-211ENST00000560538 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
GATM-211ENST00000560538 MLH3Q9UHC1 1453 aa13.4□□□□□ -0.26
GATM-211ENST00000560538 ESF1Q9H501 851 aaKnown RBP13.39□□□□□ -0.27
GATM-211ENST00000560538 ATP10AO60312 1499 aa13.39□□□□□ -0.27
GATM-211ENST00000560538 HECW2Q9P2P5 1572 aa13.38□□□□□ -0.27
GATM-211ENST00000560538 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
GATM-211ENST00000560538 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
GATM-211ENST00000560538 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
GATM-211ENST00000560538 KDM5CP41229 1560 aa13.37□□□□□ -0.27
GATM-211ENST00000560538 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
GATM-211ENST00000560538 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
GATM-211ENST00000560538 PTPN23Q9H3S7 1636 aa13.37□□□□□ -0.27
GATM-211ENST00000560538 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
GATM-211ENST00000560538 C9orf84Q5VXU9 1444 aa13.37□□□□□ -0.27
GATM-211ENST00000560538 ARHGEF40Q8TER5 1519 aa13.36□□□□□ -0.27
GATM-211ENST00000560538 STK25O00506 426 aa13.36□□□□□ -0.27
GATM-211ENST00000560538 ARHGEF5Q12774 1597 aa13.36□□□□□ -0.27
GATM-211ENST00000560538 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
GATM-211ENST00000560538 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
GATM-211ENST00000560538 MBD5Q9P267 1494 aa13.35□□□□□ -0.27
GATM-211ENST00000560538 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
GATM-211ENST00000560538 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
GATM-211ENST00000560538 ATP7AQ04656 1500 aa13.34□□□□□ -0.27
GATM-211ENST00000560538 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.28
GATM-211ENST00000560538 MLECQ14165 292 aa13.32□□□□□ -0.28
GATM-211ENST00000560538 ANKRD30AQ9BXX3 1397 aa13.32□□□□□ -0.28
GATM-211ENST00000560538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
GATM-211ENST00000560538 ITGAEP38570 1179 aa13.31□□□□□ -0.28
GATM-211ENST00000560538 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
GATM-211ENST00000560538 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
GATM-211ENST00000560538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.31□□□□□ -0.28
GATM-211ENST00000560538 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
GATM-211ENST00000560538 CHIC2Q9UKJ5 165 aa13.3□□□□□ -0.28
GATM-211ENST00000560538 DAPK1P53355 1430 aa13.3□□□□□ -0.28
GATM-211ENST00000560538 A2MP01023 1474 aa13.29□□□□□ -0.28
GATM-211ENST00000560538 KIDINS220Q9ULH0 1771 aa13.29□□□□□ -0.28
GATM-211ENST00000560538 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
GATM-211ENST00000560538 DIP2CQ9Y2E4 1556 aa13.28□□□□□ -0.28
GATM-211ENST00000560538 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
GATM-211ENST00000560538 RRP7BPQ9NSQ0 103 aa13.28□□□□□ -0.28
GATM-211ENST00000560538 DHX29Q7Z478 1369 aaKnown RBP13.28□□□□□ -0.28
GATM-211ENST00000560538 ABCC5O15440 1437 aa13.28□□□□□ -0.28
GATM-211ENST00000560538 INO80Q9ULG1 1556 aaPredicted RBP13.28□□□□□ -0.28
GATM-211ENST00000560538 ADGBQ8N7X0 1667 aa13.28□□□□□ -0.28
GATM-211ENST00000560538 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
GATM-211ENST00000560538 REREQ9P2R6 1566 aa13.27□□□□□ -0.29
GATM-211ENST00000560538 DNMT1P26358 1616 aaKnown RBP13.27□□□□□ -0.29
GATM-211ENST00000560538 KIF3BO15066 747 aa13.26□□□□□ -0.29
GATM-211ENST00000560538 GGT6Q6P531 493 aa13.26□□□□□ -0.29
GATM-211ENST00000560538 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
GATM-211ENST00000560538 BCANQ96GW7 911 aa13.26□□□□□ -0.29
GATM-211ENST00000560538 MAST1Q9Y2H9 1570 aa13.26□□□□□ -0.29
GATM-211ENST00000560538 AGLP35573 1532 aa13.25□□□□□ -0.29
GATM-211ENST00000560538 RRBP1Q9P2E9 1410 aaKnown RBP13.25□□□□□ -0.29
GATM-211ENST00000560538 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
GATM-211ENST00000560538 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
GATM-211ENST00000560538 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
GATM-211ENST00000560538 DUOX2Q9NRD8 1548 aa13.23□□□□□ -0.29
GATM-211ENST00000560538 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
GATM-211ENST00000560538 KANK1Q14678 1352 aa13.22□□□□□ -0.29
GATM-211ENST00000560538 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms