RNA–Protein interactions for RNA: ENST00000560538.1

GATM-211, Transcript of glycine amidinotransferase, humanhuman

TSL 3

Gene GATM, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-211ENST00000560538 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
GATM-211ENST00000560538 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
GATM-211ENST00000560538 PHF23Q9BUL5 403 aaPredicted RBP22■■□□□ 1.11
GATM-211ENST00000560538 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
GATM-211ENST00000560538 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
GATM-211ENST00000560538 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
GATM-211ENST00000560538 FOXD1Q16676 465 aa19.54■□□□□ 0.72
GATM-211ENST00000560538 ADRA2BP18089 450 aa19.26■□□□□ 0.67
GATM-211ENST00000560538 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
GATM-211ENST00000560538 PIAS4Q8N2W9 510 aaPredicted RBP18.57■□□□□ 0.56
GATM-211ENST00000560538 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
GATM-211ENST00000560538 KCNA4P22459 653 aa18.31■□□□□ 0.52
GATM-211ENST00000560538 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
GATM-211ENST00000560538 ABCC9O60706 1549 aa17.92■□□□□ 0.46
GATM-211ENST00000560538 MSH5O43196 834 aa17.78■□□□□ 0.44
GATM-211ENST00000560538 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
GATM-211ENST00000560538 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
GATM-211ENST00000560538 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
GATM-211ENST00000560538 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
GATM-211ENST00000560538 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
GATM-211ENST00000560538 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
GATM-211ENST00000560538 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
GATM-211ENST00000560538 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.37
GATM-211ENST00000560538 NACADO15069 1562 aa17.32■□□□□ 0.36
GATM-211ENST00000560538 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
GATM-211ENST00000560538 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
GATM-211ENST00000560538 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
GATM-211ENST00000560538 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
GATM-211ENST00000560538 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
GATM-211ENST00000560538 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
GATM-211ENST00000560538 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
GATM-211ENST00000560538 ZBTB22O15209 634 aa16.89■□□□□ 0.29
GATM-211ENST00000560538 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
GATM-211ENST00000560538 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
GATM-211ENST00000560538 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
GATM-211ENST00000560538 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
GATM-211ENST00000560538 UNC13AQ9UPW8 1703 aa16.76■□□□□ 0.27
GATM-211ENST00000560538 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
GATM-211ENST00000560538 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
GATM-211ENST00000560538 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
GATM-211ENST00000560538 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
GATM-211ENST00000560538 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
GATM-211ENST00000560538 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
GATM-211ENST00000560538 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
GATM-211ENST00000560538 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
GATM-211ENST00000560538 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
GATM-211ENST00000560538 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
GATM-211ENST00000560538 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
GATM-211ENST00000560538 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
GATM-211ENST00000560538 SMARCA2P51531 1590 aa16.03■□□□□ 0.16
GATM-211ENST00000560538 ATXN8OSP0DMR3 200 aa16.01■□□□□ 0.15
GATM-211ENST00000560538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.152e-8■□□□□ 10.9
GATM-211ENST00000560538 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
GATM-211ENST00000560538 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
GATM-211ENST00000560538 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
GATM-211ENST00000560538 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
GATM-211ENST00000560538 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
GATM-211ENST00000560538 PEG3Q9GZU2 1588 aa15.88■□□□□ 0.13
GATM-211ENST00000560538 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
GATM-211ENST00000560538 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
GATM-211ENST00000560538 WIZO95785 1651 aa15.78■□□□□ 0.12
GATM-211ENST00000560538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
GATM-211ENST00000560538 HNRNPUL2Q1KMD3 747 aaKnown RBP15.74■□□□□ 0.11
GATM-211ENST00000560538 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
GATM-211ENST00000560538 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
GATM-211ENST00000560538 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
GATM-211ENST00000560538 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
GATM-211ENST00000560538 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
GATM-211ENST00000560538 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
GATM-211ENST00000560538 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
GATM-211ENST00000560538 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
GATM-211ENST00000560538 FKBP8Q14318 412 aa15.51■□□□□ 0.07
GATM-211ENST00000560538 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
GATM-211ENST00000560538 NESP48681 1621 aa15.47■□□□□ 0.07
GATM-211ENST00000560538 APLP2Q06481 763 aa15.45■□□□□ 0.06
GATM-211ENST00000560538 CFTRP13569 1480 aa15.43■□□□□ 0.06
GATM-211ENST00000560538 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
GATM-211ENST00000560538 FANCD2Q9BXW9 1451 aa15.34■□□□□ 0.05
GATM-211ENST00000560538 CEP164Q9UPV0 1460 aa15.34■□□□□ 0.05
GATM-211ENST00000560538 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
GATM-211ENST00000560538 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
GATM-211ENST00000560538 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
GATM-211ENST00000560538 CUX2O14529 1486 aa15.28■□□□□ 0.04
GATM-211ENST00000560538 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.04
GATM-211ENST00000560538 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
GATM-211ENST00000560538 ABCC8Q09428 1581 aa15.21■□□□□ 0.03
GATM-211ENST00000560538 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
GATM-211ENST00000560538 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
GATM-211ENST00000560538 WDR62O43379 1518 aa15.17■□□□□ 0.02
GATM-211ENST00000560538 CAPN15O75808 1086 aa15.14■□□□□ 0.01
GATM-211ENST00000560538 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
GATM-211ENST00000560538 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
GATM-211ENST00000560538 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
GATM-211ENST00000560538 TOPBP1Q92547 1522 aa15.08■□□□□ 0.01
GATM-211ENST00000560538 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
GATM-211ENST00000560538 POLA2Q14181 598 aa15.05■□□□□ -0
GATM-211ENST00000560538 RTN4Q9NQC3 1192 aaKnown RBP15.05■□□□□ -0
GATM-211ENST00000560538 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
GATM-211ENST00000560538 IFT140Q96RY7 1462 aa15.02■□□□□ -0
GATM-211ENST00000560538 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms