RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
RMDN3-207ENST00000558777 PLA2R1Q13018 1463 aa23.57■■□□□ 1.36
RMDN3-207ENST00000558777 ERBINQ96RT1 1412 aa23.57■■□□□ 1.36
RMDN3-207ENST00000558777 IQGAP3Q86VI3 1631 aa23.56■■□□□ 1.36
RMDN3-207ENST00000558777 ABCC1P33527 1531 aa23.56■■□□□ 1.36
RMDN3-207ENST00000558777 MAGI2Q86UL8 1455 aa23.55■■□□□ 1.36
RMDN3-207ENST00000558777 MRS2Q9HD23 443 aa23.55■■□□□ 1.36
RMDN3-207ENST00000558777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.363e-6■■□□□ 12.1
RMDN3-207ENST00000558777 ROCK2O75116 1388 aaKnown RBP23.53■■□□□ 1.36
RMDN3-207ENST00000558777 ARAP3Q8WWN8 1544 aa23.52■■□□□ 1.36
RMDN3-207ENST00000558777 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
RMDN3-207ENST00000558777 PRAG1Q86YV5 1406 aa23.51■■□□□ 1.35
RMDN3-207ENST00000558777 ATP10AO60312 1499 aa23.5■■□□□ 1.35
RMDN3-207ENST00000558777 BCANQ96GW7 911 aa23.5■■□□□ 1.35
RMDN3-207ENST00000558777 ST20-MTHFSA0A0A6YYL1 179 aa23.49■■□□□ 1.35
RMDN3-207ENST00000558777 FAM9BQ8IZU0 186 aa23.48■■□□□ 1.35
RMDN3-207ENST00000558777 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
RMDN3-207ENST00000558777 RTEL1-TNFRSF6BF6WH68 1400 aa23.47■■□□□ 1.35
RMDN3-207ENST00000558777 A2MP01023 1474 aa23.46■■□□□ 1.35
RMDN3-207ENST00000558777 TRPM1Q7Z4N2 1603 aa23.45■■□□□ 1.34
RMDN3-207ENST00000558777 WDR7Q9Y4E6 1490 aa23.44■■□□□ 1.34
RMDN3-207ENST00000558777 RGL3Q3MIN7 710 aa23.44■■□□□ 1.34
RMDN3-207ENST00000558777 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
RMDN3-207ENST00000558777 SPAG9O60271 1321 aaKnown RBP23.43■■□□□ 1.34
RMDN3-207ENST00000558777 ZBED9Q6R2W3 1325 aa23.42■■□□□ 1.34
RMDN3-207ENST00000558777 TSHZ2Q9NRE2 1034 aa23.4■■□□□ 1.34
RMDN3-207ENST00000558777 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
RMDN3-207ENST00000558777 AFAP1Q8N556 730 aa23.39■■□□□ 1.34
RMDN3-207ENST00000558777 NBPF1Q3BBV0 1214 aa23.38■■□□□ 1.33
RMDN3-207ENST00000558777 LAMC1P11047 1609 aa23.36■■□□□ 1.33
RMDN3-207ENST00000558777 ABCA9Q8IUA7 1624 aa23.35■■□□□ 1.33
RMDN3-207ENST00000558777 FANCAO15360 1455 aa23.34■■□□□ 1.33
RMDN3-207ENST00000558777 EIF2AK4Q9P2K8 1649 aaKnown RBP23.34■■□□□ 1.33
RMDN3-207ENST00000558777 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.33
RMDN3-207ENST00000558777 KTN1Q86UP2 1357 aaKnown RBP23.33■■□□□ 1.33
RMDN3-207ENST00000558777 E9PCH4 1651 aa23.32■■□□□ 1.32
RMDN3-207ENST00000558777 DEPDC5O75140 1603 aa23.3■■□□□ 1.32
RMDN3-207ENST00000558777 CNGB1Q14028 1251 aaPredicted RBP23.3■■□□□ 1.32
RMDN3-207ENST00000558777 INO80Q9ULG1 1556 aaPredicted RBP23.29■■□□□ 1.32
RMDN3-207ENST00000558777 ATP7AQ04656 1500 aa23.29■■□□□ 1.32
RMDN3-207ENST00000558777 PTPRTO14522 1441 aa23.29■■□□□ 1.32
RMDN3-207ENST00000558777 RALBP1Q15311 655 aa23.29■■□□□ 1.32
RMDN3-207ENST00000558777 ASXL2Q76L83 1435 aa23.28■■□□□ 1.32
RMDN3-207ENST00000558777 TRPM2O94759 1503 aa23.28■■□□□ 1.32
RMDN3-207ENST00000558777 ERICH6BQ5W0A0 696 aa23.27■■□□□ 1.32
RMDN3-207ENST00000558777 PNISRQ8TF01 805 aaKnown RBP23.27■■□□□ 1.32
RMDN3-207ENST00000558777 TESK2Q96S53 571 aa23.27■■□□□ 1.32
RMDN3-207ENST00000558777 COL17A1Q9UMD9 1497 aaPredicted RBP23.27■■□□□ 1.32
RMDN3-207ENST00000558777 ADGRL1O94910 1474 aa23.26■■□□□ 1.31
RMDN3-207ENST00000558777 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
RMDN3-207ENST00000558777 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
RMDN3-207ENST00000558777 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
RMDN3-207ENST00000558777 VWDEQ8N2E2 1590 aa23.25■■□□□ 1.31
RMDN3-207ENST00000558777 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
RMDN3-207ENST00000558777 RNF17Q9BXT8 1623 aaKnown RBP23.23■■□□□ 1.31
RMDN3-207ENST00000558777 KANK1Q14678 1352 aa23.22■■□□□ 1.31
RMDN3-207ENST00000558777 STAC3Q96MF2 364 aa23.22■■□□□ 1.31
RMDN3-207ENST00000558777 TET3O43151 1660 aa23.22■■□□□ 1.31
RMDN3-207ENST00000558777 IRX6P78412 446 aaPredicted RBP23.21■■□□□ 1.31
RMDN3-207ENST00000558777 DISP3Q9P2K9 1392 aa23.21■■□□□ 1.31
RMDN3-207ENST00000558777 PER1O15534 1290 aaPredicted RBP23.21■■□□□ 1.31
RMDN3-207ENST00000558777 SMG6Q86US8 1419 aaKnown RBP23.2■■□□□ 1.3
RMDN3-207ENST00000558777 LRPPRCP42704 1394 aaKnown RBP23.2■■□□□ 1.3
RMDN3-207ENST00000558777 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
RMDN3-207ENST00000558777 PARD3Q8TEW0 1356 aa23.19■■□□□ 1.3
RMDN3-207ENST00000558777 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
RMDN3-207ENST00000558777 KIF3BO15066 747 aa23.18■■□□□ 1.3
RMDN3-207ENST00000558777 CLTCL1P53675 1640 aa23.18■■□□□ 1.3
RMDN3-207ENST00000558777 TMF1P82094 1093 aa23.17■■□□□ 1.3
RMDN3-207ENST00000558777 CEP152O94986 1710 aa23.17■■□□□ 1.3
RMDN3-207ENST00000558777 WASHC2CQ9Y4E1 1318 aa23.17■■□□□ 1.3
RMDN3-207ENST00000558777 OSCARQ8IYS5 282 aa23.17■■□□□ 1.3
RMDN3-207ENST00000558777 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
RMDN3-207ENST00000558777 MYT1LQ9UL68 1186 aa23.14■■□□□ 1.3
RMDN3-207ENST00000558777 NLRP13Q86W25 1043 aa23.14■■□□□ 1.29
RMDN3-207ENST00000558777 NEURL4Q96JN8 1562 aa23.13■■□□□ 1.29
RMDN3-207ENST00000558777 PPP4R2Q9NY27 417 aa23.13■■□□□ 1.29
RMDN3-207ENST00000558777 NUDCQ9Y266 331 aa23.13■■□□□ 1.29
RMDN3-207ENST00000558777 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
RMDN3-207ENST00000558777 ZNF518AQ6AHZ1 1483 aa23.11■■□□□ 1.29
RMDN3-207ENST00000558777 KIDINS220Q9ULH0 1771 aa23.1■■□□□ 1.29
RMDN3-207ENST00000558777 IQGAP1P46940 1657 aa23.1■■□□□ 1.29
RMDN3-207ENST00000558777 PANK3Q9H999 370 aa23.09■■□□□ 1.29
RMDN3-207ENST00000558777 SCAF11Q99590 1463 aaKnown RBP23.08■■□□□ 1.29
RMDN3-207ENST00000558777 EFCAB6Q5THR3 1501 aa23.06■■□□□ 1.28
RMDN3-207ENST00000558777 RNF123Q5XPI4 1314 aa23.06■■□□□ 1.28
RMDN3-207ENST00000558777 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
RMDN3-207ENST00000558777 CD109Q6YHK3 1445 aa23.05■■□□□ 1.28
RMDN3-207ENST00000558777 CFAP74Q9C0B2 1584 aa23.03■■□□□ 1.28
RMDN3-207ENST00000558777 POGZQ7Z3K3 1410 aa23.03■■□□□ 1.28
RMDN3-207ENST00000558777 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
RMDN3-207ENST00000558777 MYOM2P54296 1465 aa23.02■■□□□ 1.28
RMDN3-207ENST00000558777 KIAA1210Q9ULL0 1709 aa23.02■■□□□ 1.28
RMDN3-207ENST00000558777 RBM19Q9Y4C8 960 aaKnown RBP23.01■■□□□ 1.27
RMDN3-207ENST00000558777 MLH3Q9UHC1 1453 aa23.01■■□□□ 1.27
RMDN3-207ENST00000558777 CDCA8Q53HL2 280 aa23■■□□□ 1.27
RMDN3-207ENST00000558777 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
RMDN3-207ENST00000558777 PPRC1Q5VV67 1664 aaKnown RBP23■■□□□ 1.27
RMDN3-207ENST00000558777 INSRP06213 1382 aa22.99■■□□□ 1.27
RMDN3-207ENST00000558777 EIF3AQ14152 1382 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms