RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
CHD8-214ENST00000557727 INO80Q9ULG1 1556 aaPredicted RBP14.05□□□□□ -0.16
CHD8-214ENST00000557727 CROCC2H7BZ55 1655 aa14.05□□□□□ -0.16
CHD8-214ENST00000557727 PPARGC1BQ86YN6 1023 aaKnown RBP14.05□□□□□ -0.16
CHD8-214ENST00000557727 ARHGEF40Q8TER5 1519 aa14.05□□□□□ -0.16
CHD8-214ENST00000557727 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
CHD8-214ENST00000557727 ABCA6Q8N139 1617 aa14.02□□□□□ -0.16
CHD8-214ENST00000557727 ZFYVE16Q7Z3T8 1539 aa14.02□□□□□ -0.16
CHD8-214ENST00000557727 ZNF777Q9ULD5 760 aaPredicted RBP14.02□□□□□ -0.17
CHD8-214ENST00000557727 DNMT1P26358 1616 aaKnown RBP14.01□□□□□ -0.17
CHD8-214ENST00000557727 DIP2CQ9Y2E4 1556 aa14.01□□□□□ -0.17
CHD8-214ENST00000557727 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
CHD8-214ENST00000557727 YEATS2Q9ULM3 1422 aa14.01□□□□□ -0.17
CHD8-214ENST00000557727 HNRNPMP52272 730 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHD8-214ENST00000557727 AFAP1Q8N556 730 aa14.01□□□□□ -0.17
CHD8-214ENST00000557727 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
CHD8-214ENST00000557727 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
CHD8-214ENST00000557727 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
CHD8-214ENST00000557727 ADGBQ8N7X0 1667 aa13.99□□□□□ -0.17
CHD8-214ENST00000557727 ATP7AQ04656 1500 aa13.99□□□□□ -0.17
CHD8-214ENST00000557727 RRBP1Q9P2E9 1410 aaKnown RBP13.98□□□□□ -0.17
CHD8-214ENST00000557727 ABCC5O15440 1437 aa13.97□□□□□ -0.17
CHD8-214ENST00000557727 REREQ9P2R6 1566 aa13.96□□□□□ -0.17
CHD8-214ENST00000557727 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
CHD8-214ENST00000557727 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
CHD8-214ENST00000557727 DAPK1P53355 1430 aa13.95□□□□□ -0.18
CHD8-214ENST00000557727 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
CHD8-214ENST00000557727 RTEL1-TNFRSF6BF6WH68 1400 aa13.94□□□□□ -0.18
CHD8-214ENST00000557727 GABBR2O75899 941 aa13.94□□□□□ -0.18
CHD8-214ENST00000557727 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
CHD8-214ENST00000557727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHD8-214ENST00000557727 PTPRKQ15262 1439 aa13.93□□□□□ -0.18
CHD8-214ENST00000557727 ATP10AO60312 1499 aa13.93□□□□□ -0.18
CHD8-214ENST00000557727 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
CHD8-214ENST00000557727 C9orf84Q5VXU9 1444 aa13.91□□□□□ -0.18
CHD8-214ENST00000557727 RSPH4AQ5TD94 716 aa13.91□□□□□ -0.18
CHD8-214ENST00000557727 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
CHD8-214ENST00000557727 BCORL1Q5H9F3 1711 aa13.9□□□□□ -0.18
CHD8-214ENST00000557727 ADGRL2O95490 1459 aa13.9□□□□□ -0.18
CHD8-214ENST00000557727 AGLP35573 1532 aa13.89□□□□□ -0.19
CHD8-214ENST00000557727 ADAMTSL3P82987 1691 aa13.88□□□□□ -0.19
CHD8-214ENST00000557727 A2MP01023 1474 aa13.87□□□□□ -0.19
CHD8-214ENST00000557727 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
CHD8-214ENST00000557727 FAM50AQ14320 339 aaKnown RBP13.86□□□□□ -0.19
CHD8-214ENST00000557727 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
CHD8-214ENST00000557727 EIF2AK4Q9P2K8 1649 aaKnown RBP13.84□□□□□ -0.19
CHD8-214ENST00000557727 MROH1Q8NDA8 1641 aa13.83□□□□□ -0.2
CHD8-214ENST00000557727 RNF17Q9BXT8 1623 aaKnown RBP13.83□□□□□ -0.2
CHD8-214ENST00000557727 DUOX2Q9NRD8 1548 aa13.83□□□□□ -0.2
CHD8-214ENST00000557727 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.2
CHD8-214ENST00000557727 TSPY4P0CV99 314 aa13.82□□□□□ -0.2
CHD8-214ENST00000557727 TSPY10P0CW01 314 aa13.82□□□□□ -0.2
CHD8-214ENST00000557727 DEPDC5O75140 1603 aa13.82□□□□□ -0.2
CHD8-214ENST00000557727 MADDQ8WXG6 1647 aa13.82□□□□□ -0.2
CHD8-214ENST00000557727 ROCK1Q13464 1354 aa13.82□□□□□ -0.2
CHD8-214ENST00000557727 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
CHD8-214ENST00000557727 CLCN6P51797 869 aa13.81□□□□□ -0.2
CHD8-214ENST00000557727 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
CHD8-214ENST00000557727 GCC2Q8IWJ2 1684 aa13.81□□□□□ -0.2
CHD8-214ENST00000557727 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
CHD8-214ENST00000557727 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
CHD8-214ENST00000557727 CHIC2Q9UKJ5 165 aa13.79□□□□□ -0.2
CHD8-214ENST00000557727 ANKRD30AQ9BXX3 1397 aa13.79□□□□□ -0.2
CHD8-214ENST00000557727 MYT1LQ9UL68 1186 aa13.78□□□□□ -0.2
CHD8-214ENST00000557727 ERBINQ96RT1 1412 aa13.78□□□□□ -0.2
CHD8-214ENST00000557727 RIMS1Q86UR5 1692 aaKnown RBP13.78□□□□□ -0.2
CHD8-214ENST00000557727 PRDM15P57071 1507 aaPredicted RBP13.76□□□□□ -0.21
CHD8-214ENST00000557727 RRP7BPQ9NSQ0 103 aa13.76□□□□□ -0.21
CHD8-214ENST00000557727 VWDEQ8N2E2 1590 aa13.75□□□□□ -0.21
CHD8-214ENST00000557727 MROH2AA6NES4 1674 aa13.75□□□□□ -0.21
CHD8-214ENST00000557727 CLTCQ00610 1675 aaKnown RBP13.75□□□□□ -0.21
CHD8-214ENST00000557727 UNC13BO14795 1591 aa13.75□□□□□ -0.21
CHD8-214ENST00000557727 NAIPQ13075 1403 aa13.74□□□□□ -0.21
CHD8-214ENST00000557727 CEP152O94986 1710 aa13.74□□□□□ -0.21
CHD8-214ENST00000557727 ITGAEP38570 1179 aa13.74□□□□□ -0.21
CHD8-214ENST00000557727 HFM1A2PYH4 1435 aa13.73□□□□□ -0.21
CHD8-214ENST00000557727 ANKRD50Q9ULJ7 1429 aa13.73□□□□□ -0.21
CHD8-214ENST00000557727 C3P01024 1663 aa13.73□□□□□ -0.21
CHD8-214ENST00000557727 KDM5DQ9BY66 1539 aa13.73□□□□□ -0.21
CHD8-214ENST00000557727 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
CHD8-214ENST00000557727 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
CHD8-214ENST00000557727 ARID4BQ4LE39 1312 aaPredicted RBP13.72□□□□□ -0.21
CHD8-214ENST00000557727 ABCC3O15438 1527 aa13.71□□□□□ -0.21
CHD8-214ENST00000557727 PTPRMP28827 1452 aa13.7□□□□□ -0.22
CHD8-214ENST00000557727 KIF3BO15066 747 aa13.7□□□□□ -0.22
CHD8-214ENST00000557727 MLECQ14165 292 aa13.7□□□□□ -0.22
CHD8-214ENST00000557727 CAMSAP1Q5T5Y3 1602 aa13.69□□□□□ -0.22
CHD8-214ENST00000557727 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
CHD8-214ENST00000557727 LMTK2Q8IWU2 1503 aa13.68□□□□□ -0.22
CHD8-214ENST00000557727 IQGAP3Q86VI3 1631 aa13.68□□□□□ -0.22
CHD8-214ENST00000557727 CNTLNQ9NXG0 1405 aa13.66□□□□□ -0.22
CHD8-214ENST00000557727 GGT6Q6P531 493 aa13.66□□□□□ -0.22
CHD8-214ENST00000557727 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
CHD8-214ENST00000557727 CFAP65Q6ZU64 1925 aaKnown RBP13.65□□□□□ -0.22
CHD8-214ENST00000557727 TET3O43151 1660 aa13.65□□□□□ -0.22
CHD8-214ENST00000557727 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
CHD8-214ENST00000557727 EFCAB6Q5THR3 1501 aa13.64□□□□□ -0.23
CHD8-214ENST00000557727 LHX8Q68G74 356 aa13.63□□□□□ -0.23
CHD8-214ENST00000557727 SETD1BQ9UPS6 1966 aaKnown RBP13.63□□□□□ -0.23
CHD8-214ENST00000557727 E9PCH4 1651 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms