RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
CHD8-210ENST00000555962 FAM50AQ14320 339 aaKnown RBP13.8□□□□□ -0.2
CHD8-210ENST00000555962 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
CHD8-210ENST00000555962 PLXNC1O60486 1568 aa13.79□□□□□ -0.2
CHD8-210ENST00000555962 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
CHD8-210ENST00000555962 ADAMTSL3P82987 1691 aa13.79□□□□□ -0.2
CHD8-210ENST00000555962 A2MP01023 1474 aa13.77□□□□□ -0.21
CHD8-210ENST00000555962 TSPY4P0CV99 314 aa13.77□□□□□ -0.21
CHD8-210ENST00000555962 TSPY10P0CW01 314 aa13.77□□□□□ -0.21
CHD8-210ENST00000555962 AGLP35573 1532 aa13.76□□□□□ -0.21
CHD8-210ENST00000555962 PTPRKQ15262 1439 aa13.76□□□□□ -0.21
CHD8-210ENST00000555962 ARID4BQ4LE39 1312 aaPredicted RBP13.76□□□□□ -0.21
CHD8-210ENST00000555962 KDM4FA0A1W2PPD8 638 aa13.76□□□□□ -0.21
CHD8-210ENST00000555962 FER1L4A9Z1Z3 1794 aa13.76□□□□□ -0.21
CHD8-210ENST00000555962 MADDQ8WXG6 1647 aa13.75□□□□□ -0.21
CHD8-210ENST00000555962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHD8-210ENST00000555962 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
CHD8-210ENST00000555962 RIMS1Q86UR5 1692 aaKnown RBP13.73□□□□□ -0.21
CHD8-210ENST00000555962 CHIC2Q9UKJ5 165 aa13.73□□□□□ -0.21
CHD8-210ENST00000555962 ADGRL2O95490 1459 aa13.73□□□□□ -0.21
CHD8-210ENST00000555962 DHX29Q7Z478 1369 aaKnown RBP13.72□□□□□ -0.21
CHD8-210ENST00000555962 MLECQ14165 292 aa13.72□□□□□ -0.21
CHD8-210ENST00000555962 DUOX2Q9NRD8 1548 aa13.71□□□□□ -0.21
CHD8-210ENST00000555962 NCOA1Q15788 1441 aa13.71□□□□□ -0.22
CHD8-210ENST00000555962 EIF2AK4Q9P2K8 1649 aaKnown RBP13.71□□□□□ -0.22
CHD8-210ENST00000555962 ITGAEP38570 1179 aa13.7□□□□□ -0.22
CHD8-210ENST00000555962 KIF15Q9NS87 1388 aa13.7□□□□□ -0.22
CHD8-210ENST00000555962 RRP7BPQ9NSQ0 103 aa13.69□□□□□ -0.22
CHD8-210ENST00000555962 ANKRD30AQ9BXX3 1397 aa13.69□□□□□ -0.22
CHD8-210ENST00000555962 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
CHD8-210ENST00000555962 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
CHD8-210ENST00000555962 CLTCQ00610 1675 aaKnown RBP13.67□□□□□ -0.22
CHD8-210ENST00000555962 DEPDC5O75140 1603 aa13.65□□□□□ -0.22
CHD8-210ENST00000555962 KIF3BO15066 747 aa13.65□□□□□ -0.22
CHD8-210ENST00000555962 ROCK1Q13464 1354 aa13.65□□□□□ -0.22
CHD8-210ENST00000555962 PTPRMP28827 1452 aa13.65□□□□□ -0.22
CHD8-210ENST00000555962 C3P01024 1663 aa13.65□□□□□ -0.22
CHD8-210ENST00000555962 ERBINQ96RT1 1412 aa13.64□□□□□ -0.23
CHD8-210ENST00000555962 CEP152O94986 1710 aa13.64□□□□□ -0.23
CHD8-210ENST00000555962 MROH2AA6NES4 1674 aa13.64□□□□□ -0.23
CHD8-210ENST00000555962 GCC2Q8IWJ2 1684 aa13.64□□□□□ -0.23
CHD8-210ENST00000555962 GGT6Q6P531 493 aa13.64□□□□□ -0.23
CHD8-210ENST00000555962 PRDM15P57071 1507 aaPredicted RBP13.61□□□□□ -0.23
CHD8-210ENST00000555962 CFAP65Q6ZU64 1925 aaKnown RBP13.61□□□□□ -0.23
CHD8-210ENST00000555962 ANKRD50Q9ULJ7 1429 aa13.61□□□□□ -0.23
CHD8-210ENST00000555962 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
CHD8-210ENST00000555962 KDM5DQ9BY66 1539 aa13.59□□□□□ -0.23
CHD8-210ENST00000555962 UNC13BO14795 1591 aa13.59□□□□□ -0.23
CHD8-210ENST00000555962 FAM135AQ9P2D6 1515 aa13.59□□□□□ -0.23
CHD8-210ENST00000555962 NAIPQ13075 1403 aa13.58□□□□□ -0.24
CHD8-210ENST00000555962 CNTLNQ9NXG0 1405 aa13.58□□□□□ -0.24
CHD8-210ENST00000555962 CAMSAP1Q5T5Y3 1602 aa13.58□□□□□ -0.24
CHD8-210ENST00000555962 ABCC3O15438 1527 aa13.58□□□□□ -0.24
CHD8-210ENST00000555962 VWDEQ8N2E2 1590 aa13.58□□□□□ -0.24
CHD8-210ENST00000555962 CEBPAP49715 358 aaPredicted RBP13.57□□□□□ -0.24
CHD8-210ENST00000555962 SETD1BQ9UPS6 1966 aaKnown RBP13.57□□□□□ -0.24
CHD8-210ENST00000555962 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
CHD8-210ENST00000555962 HFM1A2PYH4 1435 aa13.56□□□□□ -0.24
CHD8-210ENST00000555962 ZMYM3Q14202 1370 aa13.55□□□□□ -0.24
CHD8-210ENST00000555962 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
CHD8-210ENST00000555962 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
CHD8-210ENST00000555962 IQGAP3Q86VI3 1631 aa13.53□□□□□ -0.24
CHD8-210ENST00000555962 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
CHD8-210ENST00000555962 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
CHD8-210ENST00000555962 LMTK2Q8IWU2 1503 aa13.52□□□□□ -0.25
CHD8-210ENST00000555962 TET3O43151 1660 aa13.52□□□□□ -0.25
CHD8-210ENST00000555962 KANK1Q14678 1352 aa13.51□□□□□ -0.25
CHD8-210ENST00000555962 PZPP20742 1482 aa13.5□□□□□ -0.25
CHD8-210ENST00000555962 E9PCH4 1651 aa13.5□□□□□ -0.25
CHD8-210ENST00000555962 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
CHD8-210ENST00000555962 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
CHD8-210ENST00000555962 NPATQ14207 1427 aa13.48□□□□□ -0.25
CHD8-210ENST00000555962 FBXO31Q5XUX0 539 aaPredicted RBP13.48□□□□□ -0.25
CHD8-210ENST00000555962 ARHGAP31Q2M1Z3 1444 aa13.47□□□□□ -0.25
CHD8-210ENST00000555962 SPATA31D1Q6ZQQ2 1576 aa13.47□□□□□ -0.25
CHD8-210ENST00000555962 LMTK3Q96Q04 1460 aa13.47□□□□□ -0.25
CHD8-210ENST00000555962 SETD5Q9C0A6 1442 aa13.47□□□□□ -0.25
CHD8-210ENST00000555962 ZNF142P52746 1687 aaPredicted RBP13.47□□□□□ -0.25
CHD8-210ENST00000555962 NUP155O75694 1391 aa13.46□□□□□ -0.25
CHD8-210ENST00000555962 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.25
CHD8-210ENST00000555962 ERVK-7P63135 1459 aa13.46□□□□□ -0.25
CHD8-210ENST00000555962 SYNMO15061 1565 aa13.44□□□□□ -0.26
CHD8-210ENST00000555962 UHRF1BP1Q6BDS2 1440 aa13.43□□□□□ -0.26
CHD8-210ENST00000555962 TNRQ92752 1358 aa13.43□□□□□ -0.26
CHD8-210ENST00000555962 RAB3GAP2Q9H2M9 1393 aa13.43□□□□□ -0.26
CHD8-210ENST00000555962 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
CHD8-210ENST00000555962 CEP170BQ9Y4F5 1589 aaPredicted RBP13.42□□□□□ -0.26
CHD8-210ENST00000555962 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
CHD8-210ENST00000555962 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
CHD8-210ENST00000555962 NOS1P29475 1434 aa13.4□□□□□ -0.26
CHD8-210ENST00000555962 MYO5BQ9ULV0 1848 aa13.4□□□□□ -0.26
CHD8-210ENST00000555962 PIK3C2BO00750 1634 aa13.39□□□□□ -0.27
CHD8-210ENST00000555962 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
CHD8-210ENST00000555962 HSPA2P54652 639 aa13.39□□□□□ -0.27
CHD8-210ENST00000555962 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
CHD8-210ENST00000555962 A2ML1A8K2U0 1454 aa13.39□□□□□ -0.27
CHD8-210ENST00000555962 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
CHD8-210ENST00000555962 UGGT1Q9NYU2 1555 aa13.37□□□□□ -0.27
CHD8-210ENST00000555962 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
CHD8-210ENST00000555962 PROM2Q8N271 834 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms