RNA–Protein interactions for RNA: ENST00000555225.5

SDR39U1-210, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-210ENST00000555225 ADGRL2O95490 1459 aa28.63■■■□□ 2.17
SDR39U1-210ENST00000555225 KIF15Q9NS87 1388 aa28.62■■■□□ 2.17
SDR39U1-210ENST00000555225 NCOA1Q15788 1441 aa28.62■■■□□ 2.17
SDR39U1-210ENST00000555225 ITGAEP38570 1179 aa28.62■■■□□ 2.17
SDR39U1-210ENST00000555225 DUOX2Q9NRD8 1548 aa28.61■■■□□ 2.17
SDR39U1-210ENST00000555225 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
SDR39U1-210ENST00000555225 ROCK1Q13464 1354 aa28.59■■■□□ 2.17
SDR39U1-210ENST00000555225 KIF3BO15066 747 aa28.58■■■□□ 2.17
SDR39U1-210ENST00000555225 PTPRTO14522 1441 aa28.58■■■□□ 2.17
SDR39U1-210ENST00000555225 PPP6R1Q9UPN7 881 aa28.57■■■□□ 2.16
SDR39U1-210ENST00000555225 LTBP4Q8N2S1 1624 aa28.57■■■□□ 2.16
SDR39U1-210ENST00000555225 ESF1Q9H501 851 aaKnown RBP28.55■■■□□ 2.16
SDR39U1-210ENST00000555225 ERBINQ96RT1 1412 aa28.54■■■□□ 2.16
SDR39U1-210ENST00000555225 GGT6Q6P531 493 aa28.54■■■□□ 2.16
SDR39U1-210ENST00000555225 DMRT2Q9Y5R5 561 aa28.54■■■□□ 2.16
SDR39U1-210ENST00000555225 MROH2AA6NES4 1674 aa28.54■■■□□ 2.16
SDR39U1-210ENST00000555225 EIF2AK4Q9P2K8 1649 aaKnown RBP28.51■■■□□ 2.15
SDR39U1-210ENST00000555225 CNTLNQ9NXG0 1405 aa28.5■■■□□ 2.15
SDR39U1-210ENST00000555225 SPATA31D1Q6ZQQ2 1576 aa28.5■■■□□ 2.15
SDR39U1-210ENST00000555225 DISP3Q9P2K9 1392 aa28.5■■■□□ 2.15
SDR39U1-210ENST00000555225 ILDR2Q71H61 639 aa28.49■■■□□ 2.15
SDR39U1-210ENST00000555225 CAMSAP1Q5T5Y3 1602 aa28.46■■■□□ 2.15
SDR39U1-210ENST00000555225 ANKRD50Q9ULJ7 1429 aa28.45■■■□□ 2.15
SDR39U1-210ENST00000555225 ZNF142P52746 1687 aaPredicted RBP28.44■■■□□ 2.14
SDR39U1-210ENST00000555225 NPATQ14207 1427 aa28.43■■■□□ 2.14
SDR39U1-210ENST00000555225 MYO3AQ8NEV4 1616 aa28.43■■■□□ 2.14
SDR39U1-210ENST00000555225 CLTCQ00610 1675 aaKnown RBP28.43■■■□□ 2.14
SDR39U1-210ENST00000555225 IQSEC2Q5JU85 1478 aa28.41■■■□□ 2.14
SDR39U1-210ENST00000555225 RNF17Q9BXT8 1623 aaKnown RBP28.41■■■□□ 2.14
SDR39U1-210ENST00000555225 FAM135AQ9P2D6 1515 aa28.41■■■□□ 2.14
SDR39U1-210ENST00000555225 WASHC2CQ9Y4E1 1318 aa28.41■■■□□ 2.14
SDR39U1-210ENST00000555225 KANK1Q14678 1352 aa28.36■■■□□ 2.13
SDR39U1-210ENST00000555225 ZMYM3Q14202 1370 aa28.35■■■□□ 2.13
SDR39U1-210ENST00000555225 KDM5DQ9BY66 1539 aa28.34■■■□□ 2.13
SDR39U1-210ENST00000555225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.34■■■□□ 2.136e-6■□□□□ 8.3
SDR39U1-210ENST00000555225 HFM1A2PYH4 1435 aa28.34■■■□□ 2.13
SDR39U1-210ENST00000555225 CEP170BQ9Y4F5 1589 aaPredicted RBP28.33■■■□□ 2.13
SDR39U1-210ENST00000555225 NAIPQ13075 1403 aa28.33■■■□□ 2.13
SDR39U1-210ENST00000555225 DEPDC5O75140 1603 aa28.32■■■□□ 2.12
SDR39U1-210ENST00000555225 PRDM15P57071 1507 aaPredicted RBP28.31■■■□□ 2.12
SDR39U1-210ENST00000555225 MROH1Q8NDA8 1641 aa28.31■■■□□ 2.12
SDR39U1-210ENST00000555225 SOCS7O14512 581 aa28.29■■■□□ 2.12
SDR39U1-210ENST00000555225 PLA2R1Q13018 1463 aa28.28■■■□□ 2.12
SDR39U1-210ENST00000555225 ZC3H13Q5T200 1668 aaKnown RBP28.27■■■□□ 2.12
SDR39U1-210ENST00000555225 ABCC3O15438 1527 aa28.27■■■□□ 2.12
SDR39U1-210ENST00000555225 ZNF335Q9H4Z2 1342 aaPredicted RBP28.26■■■□□ 2.11
SDR39U1-210ENST00000555225 NCKAP5LQ9HCH0 1330 aa28.26■■■□□ 2.11
SDR39U1-210ENST00000555225 GCC2Q8IWJ2 1684 aa28.26■■■□□ 2.11
SDR39U1-210ENST00000555225 VWDEQ8N2E2 1590 aa28.23■■■□□ 2.11
SDR39U1-210ENST00000555225 UNC13BO14795 1591 aa28.22■■■□□ 2.11
SDR39U1-210ENST00000555225 ACIN1Q9UKV3 1341 aaKnown RBP28.21■■■□□ 2.11
SDR39U1-210ENST00000555225 LMTK2Q8IWU2 1503 aa28.21■■■□□ 2.11
SDR39U1-210ENST00000555225 NUP155O75694 1391 aa28.19■■■□□ 2.1
SDR39U1-210ENST00000555225 PZPP20742 1482 aa28.19■■■□□ 2.1
SDR39U1-210ENST00000555225 ARHGAP31Q2M1Z3 1444 aa28.18■■■□□ 2.1
SDR39U1-210ENST00000555225 SETD5Q9C0A6 1442 aa28.17■■■□□ 2.1
SDR39U1-210ENST00000555225 CEP152O94986 1710 aa28.16■■■□□ 2.1
SDR39U1-210ENST00000555225 POLR1AO95602 1720 aaPredicted RBP28.14■■■□□ 2.1
SDR39U1-210ENST00000555225 A2ML1A8K2U0 1454 aa28.14■■■□□ 2.09
SDR39U1-210ENST00000555225 NEURL4Q96JN8 1562 aa28.13■■■□□ 2.09
SDR39U1-210ENST00000555225 FBXO31Q5XUX0 539 aaPredicted RBP28.13■■■□□ 2.09
SDR39U1-210ENST00000555225 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
SDR39U1-210ENST00000555225 PKD2Q13563 968 aa28.12■■■□□ 2.09
SDR39U1-210ENST00000555225 TRIM52Q96A61 297 aa28.12■■■□□ 2.09
SDR39U1-210ENST00000555225 IQGAP3Q86VI3 1631 aa28.1■■■□□ 2.09
SDR39U1-210ENST00000555225 UBAP1LF5GYI3 381 aa28.09■■■□□ 2.09
SDR39U1-210ENST00000555225 EFCAB6Q5THR3 1501 aa28.08■■■□□ 2.08
SDR39U1-210ENST00000555225 TET3O43151 1660 aa28.07■■■□□ 2.08
SDR39U1-210ENST00000555225 TNRQ92752 1358 aa28.07■■■□□ 2.08
SDR39U1-210ENST00000555225 RPRD2Q5VT52 1461 aaKnown RBP28.07■■■□□ 2.08
SDR39U1-210ENST00000555225 HRCP23327 699 aa28.06■■■□□ 2.08
SDR39U1-210ENST00000555225 ERVK-7P63135 1459 aa28.04■■■□□ 2.08
SDR39U1-210ENST00000555225 RAB3GAP2Q9H2M9 1393 aa28.03■■■□□ 2.08
SDR39U1-210ENST00000555225 SLC4A1APQ9BWU0 796 aaKnown RBP27.99■■■□□ 2.07
SDR39U1-210ENST00000555225 NLRP1Q9C000 1473 aa27.98■■■□□ 2.07
SDR39U1-210ENST00000555225 NOS1P29475 1434 aa27.97■■■□□ 2.07
SDR39U1-210ENST00000555225 MED1Q15648 1581 aaPredicted RBP27.97■■■□□ 2.07
SDR39U1-210ENST00000555225 CPS1P31327 1500 aa27.97■■■□□ 2.07
SDR39U1-210ENST00000555225 E9PCH4 1651 aa27.94■■■□□ 2.06
SDR39U1-210ENST00000555225 SLC52A1Q9NWF4 448 aa27.94■■■□□ 2.06
SDR39U1-210ENST00000555225 ALKQ9UM73 1620 aa27.93■■■□□ 2.06
SDR39U1-210ENST00000555225 MPHOSPH9Q99550 1183 aa27.93■■■□□ 2.06
SDR39U1-210ENST00000555225 CFAP65Q6ZU64 1925 aaKnown RBP27.92■■■□□ 2.06
SDR39U1-210ENST00000555225 THEMISQ8N1K5 641 aaPredicted RBP27.89■■■□□ 2.06
SDR39U1-210ENST00000555225 IDI1Q13907 227 aa27.88■■■□□ 2.05
SDR39U1-210ENST00000555225 UGGT1Q9NYU2 1555 aa27.88■■■□□ 2.05
SDR39U1-210ENST00000555225 HSPA1LP34931 641 aa27.87■■■□□ 2.05
SDR39U1-210ENST00000555225 SYNMO15061 1565 aa27.86■■■□□ 2.05
SDR39U1-210ENST00000555225 IQGAP1P46940 1657 aa27.86■■■□□ 2.05
SDR39U1-210ENST00000555225 MED14O60244 1454 aa27.85■■■□□ 2.05
SDR39U1-210ENST00000555225 STRCP1A6NGW2 1772 aa27.85■■■□□ 2.05
SDR39U1-210ENST00000555225 PIP4K2BP78356 416 aa27.84■■■□□ 2.05
SDR39U1-210ENST00000555225 SCAF1Q9H7N4 1312 aaKnown RBP27.84■■■□□ 2.05
SDR39U1-210ENST00000555225 STAG3Q9UJ98 1225 aa27.83■■■□□ 2.05
SDR39U1-210ENST00000555225 NPHP4O75161 1426 aaPredicted RBP27.83■■■□□ 2.05
SDR39U1-210ENST00000555225 SPHKAPQ2M3C7 1700 aa27.78■■■□□ 2.04
SDR39U1-210ENST00000555225 PIK3C2BO00750 1634 aa27.77■■■□□ 2.04
SDR39U1-210ENST00000555225 KDM5AP29375 1690 aaKnown RBP27.76■■■□□ 2.03
SDR39U1-210ENST00000555225 FOXD1Q16676 465 aa27.76■■■□□ 2.03
SDR39U1-210ENST00000555225 ANKLE2Q86XL3 938 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms