RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
MEG3-224ENST00000554639 INO80Q9ULG1 1556 aaPredicted RBP25■■□□□ 1.59
MEG3-224ENST00000554639 NPM1P06748 294 aaKnown RBP eCLIP24.98■■□□□ 1.59
MEG3-224ENST00000554639 KDM5CP41229 1560 aa24.98■■□□□ 1.59
MEG3-224ENST00000554639 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
MEG3-224ENST00000554639 DEPDC5O75140 1603 aa24.97■■□□□ 1.59
MEG3-224ENST00000554639 ATP7AQ04656 1500 aa24.96■■□□□ 1.59
MEG3-224ENST00000554639 USP47Q96K76 1375 aa24.95■■□□□ 1.59
MEG3-224ENST00000554639 EIF2AK4Q9P2K8 1649 aaKnown RBP24.95■■□□□ 1.59
MEG3-224ENST00000554639 PLA2R1Q13018 1463 aa24.95■■□□□ 1.58
MEG3-224ENST00000554639 ADGRL1O94910 1474 aa24.94■■□□□ 1.58
MEG3-224ENST00000554639 SCAPERQ9BY12 1400 aa24.9■■□□□ 1.58
MEG3-224ENST00000554639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.89■■□□□ 1.58
MEG3-224ENST00000554639 KIF7Q2M1P5 1343 aa24.89■■□□□ 1.58
MEG3-224ENST00000554639 LAMC1P11047 1609 aa24.89■■□□□ 1.58
MEG3-224ENST00000554639 C11orf95C9JLR9 678 aaPredicted RBP24.88■■□□□ 1.57
MEG3-224ENST00000554639 AFAP1Q8N556 730 aa24.88■■□□□ 1.57
MEG3-224ENST00000554639 VWDEQ8N2E2 1590 aa24.87■■□□□ 1.57
MEG3-224ENST00000554639 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
MEG3-224ENST00000554639 TET3O43151 1660 aa24.87■■□□□ 1.57
MEG3-224ENST00000554639 PRAG1Q86YV5 1406 aa24.87■■□□□ 1.57
MEG3-224ENST00000554639 DCAF11Q8TEB1 546 aa24.86■■□□□ 1.57
MEG3-224ENST00000554639 TRPM1Q7Z4N2 1603 aa24.86■■□□□ 1.57
MEG3-224ENST00000554639 ZNF518AQ6AHZ1 1483 aa24.85■■□□□ 1.57
MEG3-224ENST00000554639 KANK1Q14678 1352 aa24.85■■□□□ 1.57
MEG3-224ENST00000554639 STAC3Q96MF2 364 aa24.85■■□□□ 1.57
MEG3-224ENST00000554639 DHX29Q7Z478 1369 aaKnown RBP24.84■■□□□ 1.57
MEG3-224ENST00000554639 CARD11Q9BXL7 1154 aa24.83■■□□□ 1.57
MEG3-224ENST00000554639 GPRASP1Q5JY77 1395 aa24.83■■□□□ 1.57
MEG3-224ENST00000554639 TRPM2O94759 1503 aa24.83■■□□□ 1.57
MEG3-224ENST00000554639 E9PCH4 1651 aa24.83■■□□□ 1.57
MEG3-224ENST00000554639 A2MP01023 1474 aa24.83■■□□□ 1.57
MEG3-224ENST00000554639 ZNF326Q5BKZ1 582 aaKnown RBP24.83■■□□□ 1.57
MEG3-224ENST00000554639 BCORL1Q5H9F3 1711 aa24.82■■□□□ 1.56
MEG3-224ENST00000554639 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
MEG3-224ENST00000554639 PTPRTO14522 1441 aa24.82■■□□□ 1.56
MEG3-224ENST00000554639 NEURL4Q96JN8 1562 aa24.82■■□□□ 1.56
MEG3-224ENST00000554639 CD109Q6YHK3 1445 aa24.8■■□□□ 1.56
MEG3-224ENST00000554639 SPHKAPQ2M3C7 1700 aa24.79■■□□□ 1.56
MEG3-224ENST00000554639 KIDINS220Q9ULH0 1771 aa24.78■■□□□ 1.56
MEG3-224ENST00000554639 KDM2AQ9Y2K7 1162 aa24.78■■□□□ 1.56
MEG3-224ENST00000554639 PRKRIP1Q9H875 184 aaPredicted RBP24.77■■□□□ 1.56
MEG3-224ENST00000554639 CEP152O94986 1710 aa24.76■■□□□ 1.55
MEG3-224ENST00000554639 NEO1Q92859 1461 aa24.76■■□□□ 1.55
MEG3-224ENST00000554639 MLH3Q9UHC1 1453 aa24.76■■□□□ 1.55
MEG3-224ENST00000554639 POGZQ7Z3K3 1410 aa24.74■■□□□ 1.55
MEG3-224ENST00000554639 LMTK2Q8IWU2 1503 aa24.74■■□□□ 1.55
MEG3-224ENST00000554639 MROH1Q8NDA8 1641 aa24.73■■□□□ 1.55
MEG3-224ENST00000554639 RNF17Q9BXT8 1623 aaKnown RBP24.73■■□□□ 1.55
MEG3-224ENST00000554639 HECW2Q9P2P5 1572 aa24.69■■□□□ 1.54
MEG3-224ENST00000554639 KIF3BO15066 747 aa24.67■■□□□ 1.54
MEG3-224ENST00000554639 RGL3Q3MIN7 710 aa24.67■■□□□ 1.54
MEG3-224ENST00000554639 KTN1Q86UP2 1357 aaKnown RBP24.67■■□□□ 1.54
MEG3-224ENST00000554639 ST20-MTHFSA0A0A6YYL1 179 aa24.66■■□□□ 1.54
MEG3-224ENST00000554639 EFCAB6Q5THR3 1501 aa24.66■■□□□ 1.54
MEG3-224ENST00000554639 CLTCL1P53675 1640 aa24.66■■□□□ 1.54
MEG3-224ENST00000554639 MYT1LQ9UL68 1186 aa24.66■■□□□ 1.54
MEG3-224ENST00000554639 GLI2P10070 1586 aa24.65■■□□□ 1.54
MEG3-224ENST00000554639 MADDQ8WXG6 1647 aa24.64■■□□□ 1.53
MEG3-224ENST00000554639 MAP3K4Q9Y6R4 1608 aa24.61■■□□□ 1.53
MEG3-224ENST00000554639 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
MEG3-224ENST00000554639 COL17A1Q9UMD9 1497 aaPredicted RBP24.57■■□□□ 1.52
MEG3-224ENST00000554639 FRMPD1Q5SYB0 1578 aa24.57■■□□□ 1.52
MEG3-224ENST00000554639 PPRC1Q5VV67 1664 aaKnown RBP24.56■■□□□ 1.52
MEG3-224ENST00000554639 KIF1BO60333 1816 aa24.56■■□□□ 1.52
MEG3-224ENST00000554639 NBPF1Q3BBV0 1214 aa24.55■■□□□ 1.52
MEG3-224ENST00000554639 MRS2Q9HD23 443 aa24.55■■□□□ 1.52
MEG3-224ENST00000554639 MYOM2P54296 1465 aa24.55■■□□□ 1.52
MEG3-224ENST00000554639 SUPT16HQ9Y5B9 1047 aaKnown RBP24.55■■□□□ 1.52
MEG3-224ENST00000554639 ABCA6Q8N139 1617 aa24.54■■□□□ 1.52
MEG3-224ENST00000554639 IQGAP1P46940 1657 aa24.54■■□□□ 1.52
MEG3-224ENST00000554639 HNRNPUQ00839 825 aaKnown RBP eCLIP24.52■■□□□ 1.527e-8■■□□□ 13.8
MEG3-224ENST00000554639 WASHC2CQ9Y4E1 1318 aa24.52■■□□□ 1.52
MEG3-224ENST00000554639 RICTORQ6R327 1708 aa24.51■■□□□ 1.51
MEG3-224ENST00000554639 RALBP1Q15311 655 aa24.5■■□□□ 1.51
MEG3-224ENST00000554639 TESK2Q96S53 571 aa24.5■■□□□ 1.51
MEG3-224ENST00000554639 SLC24A1O60721 1099 aa24.49■■□□□ 1.51
MEG3-224ENST00000554639 POLR3GLQ9BT43 218 aa24.49■■□□□ 1.51
MEG3-224ENST00000554639 TMF1P82094 1093 aa24.49■■□□□ 1.51
MEG3-224ENST00000554639 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
MEG3-224ENST00000554639 RIMBP3CA6NJZ7 1639 aa24.48■■□□□ 1.51
MEG3-224ENST00000554639 RIMBP3BA6NNM3 1639 aa24.48■■□□□ 1.51
MEG3-224ENST00000554639 RIMBP3Q9UFD9 1639 aa24.48■■□□□ 1.51
MEG3-224ENST00000554639 SCAF11Q99590 1463 aaKnown RBP24.48■■□□□ 1.51
MEG3-224ENST00000554639 DIP2CQ9Y2E4 1556 aa24.47■■□□□ 1.51
MEG3-224ENST00000554639 CCDC184Q52MB2 194 aa24.47■■□□□ 1.51
MEG3-224ENST00000554639 ZC3H13Q5T200 1668 aaKnown RBP24.46■■□□□ 1.51
MEG3-224ENST00000554639 ABCC3O15438 1527 aa24.45■■□□□ 1.51
MEG3-224ENST00000554639 EIF3AQ14152 1382 aaKnown RBP24.45■■□□□ 1.5
MEG3-224ENST00000554639 ADGRB3O60242 1522 aa24.45■■□□□ 1.5
MEG3-224ENST00000554639 NRXN1Q9ULB1 1477 aa24.44■■□□□ 1.5
MEG3-224ENST00000554639 ZBED9Q6R2W3 1325 aa24.44■■□□□ 1.5
MEG3-224ENST00000554639 NEFLP07196 543 aa24.44■■□□□ 1.5
MEG3-224ENST00000554639 CDCA8Q53HL2 280 aa24.44■■□□□ 1.5
MEG3-224ENST00000554639 BRD4O60885 1362 aaPredicted RBP24.43■■□□□ 1.5
MEG3-224ENST00000554639 ZMYM4Q5VZL5 1548 aa24.42■■□□□ 1.5
MEG3-224ENST00000554639 NPATQ14207 1427 aa24.42■■□□□ 1.5
MEG3-224ENST00000554639 MYBBP1AQ9BQG0 1328 aaKnown RBP24.41■■□□□ 1.5
MEG3-224ENST00000554639 ARHGAP31Q2M1Z3 1444 aa24.41■■□□□ 1.5
MEG3-224ENST00000554639 CAMSAP1Q5T5Y3 1602 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms