RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 EIF2AK4Q9P2K8 1649 aaKnown RBP19.14■□□□□ 0.66
SHMT2-214ENST00000554604 ABCC5O15440 1437 aa19.14■□□□□ 0.65
SHMT2-214ENST00000554604 DAPK1P53355 1430 aa19.14■□□□□ 0.65
SHMT2-214ENST00000554604 PTPRKQ15262 1439 aa19.14■□□□□ 0.65
SHMT2-214ENST00000554604 ILDR1Q86SU0 546 aaPredicted RBP19.13■□□□□ 0.65
SHMT2-214ENST00000554604 DMRT2Q9Y5R5 561 aa19.13■□□□□ 0.65
SHMT2-214ENST00000554604 DUOX2Q9NRD8 1548 aa19.13■□□□□ 0.65
SHMT2-214ENST00000554604 MYO3AQ8NEV4 1616 aa19.13■□□□□ 0.65
SHMT2-214ENST00000554604 RNF17Q9BXT8 1623 aaKnown RBP19.13■□□□□ 0.65
SHMT2-214ENST00000554604 KIF15Q9NS87 1388 aa19.11■□□□□ 0.65
SHMT2-214ENST00000554604 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
SHMT2-214ENST00000554604 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
SHMT2-214ENST00000554604 ZNF142P52746 1687 aaPredicted RBP19.11■□□□□ 0.65
SHMT2-214ENST00000554604 ZC3H13Q5T200 1668 aaKnown RBP19.09■□□□□ 0.65
SHMT2-214ENST00000554604 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
SHMT2-214ENST00000554604 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
SHMT2-214ENST00000554604 CFAP65Q6ZU64 1925 aaKnown RBP19.09■□□□□ 0.65
SHMT2-214ENST00000554604 CEP170BQ9Y4F5 1589 aaPredicted RBP19.08■□□□□ 0.65
SHMT2-214ENST00000554604 PZPP20742 1482 aa19.08■□□□□ 0.64
SHMT2-214ENST00000554604 CAMSAP1Q5T5Y3 1602 aa19.07■□□□□ 0.64
SHMT2-214ENST00000554604 ANKRD30AQ9BXX3 1397 aa19.06■□□□□ 0.64
SHMT2-214ENST00000554604 CEP152O94986 1710 aa19.06■□□□□ 0.64
SHMT2-214ENST00000554604 FBXO31Q5XUX0 539 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-214ENST00000554604 ERBINQ96RT1 1412 aa19.06■□□□□ 0.64
SHMT2-214ENST00000554604 ABCC3O15438 1527 aa19.05■□□□□ 0.64
SHMT2-214ENST00000554604 NCOA1Q15788 1441 aa19.05■□□□□ 0.64
SHMT2-214ENST00000554604 TNRQ92752 1358 aa19.05■□□□□ 0.64
SHMT2-214ENST00000554604 MROH1Q8NDA8 1641 aa19.04■□□□□ 0.64
SHMT2-214ENST00000554604 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
SHMT2-214ENST00000554604 PTPRTO14522 1441 aa19.02■□□□□ 0.64
SHMT2-214ENST00000554604 FBXO41Q8TF61 875 aa19.01■□□□□ 0.63
SHMT2-214ENST00000554604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.63
SHMT2-214ENST00000554604 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
SHMT2-214ENST00000554604 PLA2R1Q13018 1463 aa18.99■□□□□ 0.63
SHMT2-214ENST00000554604 KANK1Q14678 1352 aa18.99■□□□□ 0.63
SHMT2-214ENST00000554604 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
SHMT2-214ENST00000554604 NCKAP5LQ9HCH0 1330 aa18.99■□□□□ 0.63
SHMT2-214ENST00000554604 ADGRL2O95490 1459 aa18.98■□□□□ 0.63
SHMT2-214ENST00000554604 PKD2Q13563 968 aa18.98■□□□□ 0.63
SHMT2-214ENST00000554604 CERKQ8TCT0 537 aa18.97■□□□□ 0.63
SHMT2-214ENST00000554604 NLRP1Q9C000 1473 aa18.97■□□□□ 0.63
SHMT2-214ENST00000554604 POLR1AO95602 1720 aaPredicted RBP18.95■□□□□ 0.62
SHMT2-214ENST00000554604 SPATA31D1Q6ZQQ2 1576 aa18.95■□□□□ 0.62
SHMT2-214ENST00000554604 ERVK-7P63135 1459 aa18.95■□□□□ 0.62
SHMT2-214ENST00000554604 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
SHMT2-214ENST00000554604 THEMISQ8N1K5 641 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-214ENST00000554604 ANKRD50Q9ULJ7 1429 aa18.91■□□□□ 0.62
SHMT2-214ENST00000554604 ITGAEP38570 1179 aa18.91■□□□□ 0.62
SHMT2-214ENST00000554604 ARHGAP31Q2M1Z3 1444 aa18.91■□□□□ 0.62
SHMT2-214ENST00000554604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.9■□□□□ 0.62
SHMT2-214ENST00000554604 TRIM26Q12899 539 aaPredicted RBP18.89■□□□□ 0.61
SHMT2-214ENST00000554604 ANKLE2Q86XL3 938 aa18.88■□□□□ 0.61
SHMT2-214ENST00000554604 VWDEQ8N2E2 1590 aa18.88■□□□□ 0.61
SHMT2-214ENST00000554604 LMTK2Q8IWU2 1503 aa18.87■□□□□ 0.61
SHMT2-214ENST00000554604 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
SHMT2-214ENST00000554604 ROCK1Q13464 1354 aa18.86■□□□□ 0.61
SHMT2-214ENST00000554604 UBR1Q8IWV7 1749 aa18.86■□□□□ 0.61
SHMT2-214ENST00000554604 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
SHMT2-214ENST00000554604 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
SHMT2-214ENST00000554604 ZNF335Q9H4Z2 1342 aaPredicted RBP18.84■□□□□ 0.61
SHMT2-214ENST00000554604 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
SHMT2-214ENST00000554604 UNC13BO14795 1591 aa18.81■□□□□ 0.6
SHMT2-214ENST00000554604 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
SHMT2-214ENST00000554604 TET3O43151 1660 aa18.81■□□□□ 0.6
SHMT2-214ENST00000554604 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
SHMT2-214ENST00000554604 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
SHMT2-214ENST00000554604 IQGAP1P46940 1657 aa18.79■□□□□ 0.6
SHMT2-214ENST00000554604 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
SHMT2-214ENST00000554604 RRBP1Q9P2E9 1410 aaKnown RBP18.79■□□□□ 0.6
SHMT2-214ENST00000554604 MED14O60244 1454 aa18.77■□□□□ 0.6
SHMT2-214ENST00000554604 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.6
SHMT2-214ENST00000554604 RPRD2Q5VT52 1461 aaKnown RBP18.77■□□□□ 0.6
SHMT2-214ENST00000554604 SYNMO15061 1565 aa18.77■□□□□ 0.6
SHMT2-214ENST00000554604 KDM5AP29375 1690 aaKnown RBP18.76■□□□□ 0.59
SHMT2-214ENST00000554604 IDI1Q13907 227 aa18.76■□□□□ 0.59
SHMT2-214ENST00000554604 NOS1P29475 1434 aa18.75■□□□□ 0.59
SHMT2-214ENST00000554604 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
SHMT2-214ENST00000554604 SCAF11Q99590 1463 aaKnown RBP18.75■□□□□ 0.59
SHMT2-214ENST00000554604 IQGAP3Q86VI3 1631 aa18.74■□□□□ 0.59
SHMT2-214ENST00000554604 TXNDC2Q86VQ3 553 aa18.74■□□□□ 0.59
SHMT2-214ENST00000554604 SLIT1O75093 1534 aa18.74■□□□□ 0.59
SHMT2-214ENST00000554604 NUP155O75694 1391 aa18.73■□□□□ 0.59
SHMT2-214ENST00000554604 SLC52A1Q9NWF4 448 aa18.73■□□□□ 0.59
SHMT2-214ENST00000554604 E9PCH4 1651 aa18.73■□□□□ 0.59
SHMT2-214ENST00000554604 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
SHMT2-214ENST00000554604 CPS1P31327 1500 aa18.71■□□□□ 0.59
SHMT2-214ENST00000554604 LTKP29376 864 aa18.71■□□□□ 0.59
SHMT2-214ENST00000554604 MYO5BQ9ULV0 1848 aa18.71■□□□□ 0.59
SHMT2-214ENST00000554604 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
SHMT2-214ENST00000554604 ADGRB3O60242 1522 aa18.7■□□□□ 0.58
SHMT2-214ENST00000554604 UBAP1LF5GYI3 381 aa18.68■□□□□ 0.58
SHMT2-214ENST00000554604 STRCP1A6NGW2 1772 aa18.65■□□□□ 0.58
SHMT2-214ENST00000554604 NAIPQ13075 1403 aa18.65■□□□□ 0.58
SHMT2-214ENST00000554604 CHGAP10645 457 aaKnown RBP18.64■□□□□ 0.57
SHMT2-214ENST00000554604 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
SHMT2-214ENST00000554604 HRCP23327 699 aa18.62■□□□□ 0.57
SHMT2-214ENST00000554604 BCANQ96GW7 911 aa18.62■□□□□ 0.57
SHMT2-214ENST00000554604 SPHKAPQ2M3C7 1700 aa18.62■□□□□ 0.57
SHMT2-214ENST00000554604 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
SHMT2-214ENST00000554604 HDGFP51858 240 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms