RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 FBXO31Q5XUX0 539 aaPredicted RBP10.06□□□□□ -0.8
FOXN3-205ENST00000553904 FAM135AQ9P2D6 1515 aa10.06□□□□□ -0.8
FOXN3-205ENST00000553904 TNRQ92752 1358 aa10.05□□□□□ -0.8
FOXN3-205ENST00000553904 NCOA1Q15788 1441 aa10.05□□□□□ -0.8
FOXN3-205ENST00000553904 KANK1Q14678 1352 aa10.04□□□□□ -0.8
FOXN3-205ENST00000553904 ANKRD30AQ9BXX3 1397 aa10.03□□□□□ -0.8
FOXN3-205ENST00000553904 FAM50AQ14320 339 aaKnown RBP10.03□□□□□ -0.8
FOXN3-205ENST00000553904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.03□□□□□ -0.88e-19■□□□□ 10.3
FOXN3-205ENST00000553904 PLA2R1Q13018 1463 aa10.03□□□□□ -0.8
FOXN3-205ENST00000553904 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.8
FOXN3-205ENST00000553904 KDM5DQ9BY66 1539 aa10.02□□□□□ -0.8
FOXN3-205ENST00000553904 CHIC2Q9UKJ5 165 aa10.02□□□□□ -0.81
FOXN3-205ENST00000553904 CAMSAP1Q5T5Y3 1602 aa10.02□□□□□ -0.81
FOXN3-205ENST00000553904 A2ML1A8K2U0 1454 aa10.02□□□□□ -0.81
FOXN3-205ENST00000553904 PZPP20742 1482 aa10.02□□□□□ -0.81
FOXN3-205ENST00000553904 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.81
FOXN3-205ENST00000553904 KIF15Q9NS87 1388 aa10.01□□□□□ -0.81
FOXN3-205ENST00000553904 MAST1Q9Y2H9 1570 aa10.01□□□□□ -0.81
FOXN3-205ENST00000553904 ABCC5O15440 1437 aa10.01□□□□□ -0.81
FOXN3-205ENST00000553904 FGD6Q6ZV73 1430 aa10.01□□□□□ -0.81
FOXN3-205ENST00000553904 NLRP1Q9C000 1473 aa10□□□□□ -0.81
FOXN3-205ENST00000553904 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
FOXN3-205ENST00000553904 DAPK1P53355 1430 aa9.99□□□□□ -0.81
FOXN3-205ENST00000553904 ERBINQ96RT1 1412 aa9.99□□□□□ -0.81
FOXN3-205ENST00000553904 STRCQ7RTU9 1775 aa9.99□□□□□ -0.81
FOXN3-205ENST00000553904 EID1Q9Y6B2 187 aa9.99□□□□□ -0.81
FOXN3-205ENST00000553904 CEP170BQ9Y4F5 1589 aaPredicted RBP9.99□□□□□ -0.81
FOXN3-205ENST00000553904 SHANK2Q9UPX8 1470 aa9.98□□□□□ -0.81
FOXN3-205ENST00000553904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.98□□□□□ -0.81
FOXN3-205ENST00000553904 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
FOXN3-205ENST00000553904 IQSEC2Q5JU85 1478 aa9.98□□□□□ -0.81
FOXN3-205ENST00000553904 PTPN23Q9H3S7 1636 aa9.97□□□□□ -0.81
FOXN3-205ENST00000553904 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
FOXN3-205ENST00000553904 ZNF335Q9H4Z2 1342 aaPredicted RBP9.97□□□□□ -0.81
FOXN3-205ENST00000553904 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.81
FOXN3-205ENST00000553904 UBAP1LF5GYI3 381 aa9.96□□□□□ -0.82
FOXN3-205ENST00000553904 TOM1O60784 492 aa9.96□□□□□ -0.82
FOXN3-205ENST00000553904 ARHGAP31Q2M1Z3 1444 aa9.96□□□□□ -0.82
FOXN3-205ENST00000553904 UGGT1Q9NYU2 1555 aa9.96□□□□□ -0.82
FOXN3-205ENST00000553904 MYO3AQ8NEV4 1616 aa9.96□□□□□ -0.82
FOXN3-205ENST00000553904 TXNDC2Q86VQ3 553 aa9.95□□□□□ -0.82
FOXN3-205ENST00000553904 SLC52A1Q9NWF4 448 aa9.95□□□□□ -0.82
FOXN3-205ENST00000553904 ZNF142P52746 1687 aaPredicted RBP9.94□□□□□ -0.82
FOXN3-205ENST00000553904 DNMT1P26358 1616 aaKnown RBP9.94□□□□□ -0.82
FOXN3-205ENST00000553904 ABCC3O15438 1527 aa9.94□□□□□ -0.82
FOXN3-205ENST00000553904 RNF17Q9BXT8 1623 aaKnown RBP9.93□□□□□ -0.82
FOXN3-205ENST00000553904 ZC3H13Q5T200 1668 aaKnown RBP9.93□□□□□ -0.82
FOXN3-205ENST00000553904 LTBP4Q8N2S1 1624 aa9.93□□□□□ -0.82
FOXN3-205ENST00000553904 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
FOXN3-205ENST00000553904 NPHP4O75161 1426 aaPredicted RBP9.92□□□□□ -0.82
FOXN3-205ENST00000553904 IDI1Q13907 227 aa9.92□□□□□ -0.82
FOXN3-205ENST00000553904 SPATA31D1Q6ZQQ2 1576 aa9.92□□□□□ -0.82
FOXN3-205ENST00000553904 MED14O60244 1454 aa9.91□□□□□ -0.82
FOXN3-205ENST00000553904 ANKRD50Q9ULJ7 1429 aa9.91□□□□□ -0.82
FOXN3-205ENST00000553904 ITGAEP38570 1179 aa9.9□□□□□ -0.82
FOXN3-205ENST00000553904 BCANQ96GW7 911 aa9.9□□□□□ -0.82
FOXN3-205ENST00000553904 ADGRL2O95490 1459 aa9.9□□□□□ -0.83
FOXN3-205ENST00000553904 ROCK1Q13464 1354 aa9.89□□□□□ -0.83
FOXN3-205ENST00000553904 SCAF1Q9H7N4 1312 aaKnown RBP9.89□□□□□ -0.83
FOXN3-205ENST00000553904 CPS1P31327 1500 aa9.89□□□□□ -0.83
FOXN3-205ENST00000553904 LTKP29376 864 aa9.89□□□□□ -0.83
FOXN3-205ENST00000553904 PRDM15P57071 1507 aaPredicted RBP9.88□□□□□ -0.83
FOXN3-205ENST00000553904 PPARGC1BQ86YN6 1023 aaKnown RBP9.88□□□□□ -0.83
FOXN3-205ENST00000553904 TMEM2Q9UHN6 1383 aa9.88□□□□□ -0.83
FOXN3-205ENST00000553904 LMTK2Q8IWU2 1503 aa9.87□□□□□ -0.83
FOXN3-205ENST00000553904 DEPDC5O75140 1603 aa9.87□□□□□ -0.83
FOXN3-205ENST00000553904 PIP4K2BP78356 416 aa9.87□□□□□ -0.83
FOXN3-205ENST00000553904 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.87□□□□□ -0.83
FOXN3-205ENST00000553904 RPRD2Q5VT52 1461 aaKnown RBP9.86□□□□□ -0.83
FOXN3-205ENST00000553904 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
FOXN3-205ENST00000553904 MROH1Q8NDA8 1641 aa9.86□□□□□ -0.83
FOXN3-205ENST00000553904 CROCC2H7BZ55 1655 aa9.86□□□□□ -0.83
FOXN3-205ENST00000553904 DISP3Q9P2K9 1392 aa9.86□□□□□ -0.83
FOXN3-205ENST00000553904 PPP1R15AO75807 674 aaPredicted RBP9.85□□□□□ -0.83
FOXN3-205ENST00000553904 CHGAP10645 457 aaKnown RBP9.85□□□□□ -0.83
FOXN3-205ENST00000553904 NUP155O75694 1391 aa9.85□□□□□ -0.83
FOXN3-205ENST00000553904 NOS1P29475 1434 aa9.84□□□□□ -0.83
FOXN3-205ENST00000553904 SLIT1O75093 1534 aa9.84□□□□□ -0.83
FOXN3-205ENST00000553904 KCNA6P17658 529 aa9.84□□□□□ -0.83
FOXN3-205ENST00000553904 ARHGAP23Q9P227 1491 aa9.84□□□□□ -0.83
FOXN3-205ENST00000553904 CEP152O94986 1710 aa9.83□□□□□ -0.84
FOXN3-205ENST00000553904 PROSER2Q86WR7 435 aaPredicted RBP9.83□□□□□ -0.84
FOXN3-205ENST00000553904 VWDEQ8N2E2 1590 aa9.83□□□□□ -0.84
FOXN3-205ENST00000553904 NEURL4Q96JN8 1562 aa9.83□□□□□ -0.84
FOXN3-205ENST00000553904 EFCAB6Q5THR3 1501 aa9.82□□□□□ -0.84
FOXN3-205ENST00000553904 POLR1AO95602 1720 aaPredicted RBP9.82□□□□□ -0.84
FOXN3-205ENST00000553904 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
FOXN3-205ENST00000553904 HSPA1LP34931 641 aa9.81□□□□□ -0.84
FOXN3-205ENST00000553904 TBX22Q9Y458 520 aa9.81□□□□□ -0.84
FOXN3-205ENST00000553904 IQGAP1P46940 1657 aa9.8□□□□□ -0.84
FOXN3-205ENST00000553904 UBR1Q8IWV7 1749 aa9.8□□□□□ -0.84
FOXN3-205ENST00000553904 ACIN1Q9UKV3 1341 aaKnown RBP9.8□□□□□ -0.84
FOXN3-205ENST00000553904 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
FOXN3-205ENST00000553904 CFAP65Q6ZU64 1925 aaKnown RBP9.79□□□□□ -0.84
FOXN3-205ENST00000553904 LRRC7Q96NW7 1537 aa9.78□□□□□ -0.84
FOXN3-205ENST00000553904 KDM5AP29375 1690 aaKnown RBP9.78□□□□□ -0.84
FOXN3-205ENST00000553904 ZNF326Q5BKZ1 582 aaKnown RBP9.78□□□□□ -0.84
FOXN3-205ENST00000553904 PIK3C2BO00750 1634 aa9.78□□□□□ -0.84
FOXN3-205ENST00000553904 PLEKHG1Q9ULL1 1385 aa9.77□□□□□ -0.84
FOXN3-205ENST00000553904 RRBP1Q9P2E9 1410 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms