RNA–Protein interactions for RNA: ENST00000551327.5

PXN-218, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-218ENST00000551327 MED1Q15648 1581 aaPredicted RBP14.02□□□□□ -0.16
PXN-218ENST00000551327 RTEL1-TNFRSF6BF6WH68 1400 aa14.02□□□□□ -0.16
PXN-218ENST00000551327 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
PXN-218ENST00000551327 PLA2R1Q13018 1463 aa14.01□□□□□ -0.17
PXN-218ENST00000551327 ESF1Q9H501 851 aaKnown RBP14.01□□□□□ -0.17
PXN-218ENST00000551327 VWDEQ8N2E2 1590 aa14□□□□□ -0.17
PXN-218ENST00000551327 GGT6Q6P531 493 aa13.99□□□□□ -0.17
PXN-218ENST00000551327 A2ML1A8K2U0 1454 aa13.99□□□□□ -0.17
PXN-218ENST00000551327 CAMSAP2Q08AD1 1489 aa13.98□□□□□ -0.17
PXN-218ENST00000551327 IQGAP1P46940 1657 aa13.98□□□□□ -0.17
PXN-218ENST00000551327 ZC3H13Q5T200 1668 aaKnown RBP13.98□□□□□ -0.17
PXN-218ENST00000551327 MROH1Q8NDA8 1641 aa13.97□□□□□ -0.17
PXN-218ENST00000551327 UBAP1LF5GYI3 381 aa13.96□□□□□ -0.17
PXN-218ENST00000551327 FBXO31Q5XUX0 539 aaPredicted RBP13.96□□□□□ -0.17
PXN-218ENST00000551327 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
PXN-218ENST00000551327 RNF17Q9BXT8 1623 aaKnown RBP13.95□□□□□ -0.18
PXN-218ENST00000551327 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
PXN-218ENST00000551327 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
PXN-218ENST00000551327 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
PXN-218ENST00000551327 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
PXN-218ENST00000551327 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
PXN-218ENST00000551327 PZPP20742 1482 aa13.92□□□□□ -0.18
PXN-218ENST00000551327 CCDC141Q6ZP82 1450 aa13.92□□□□□ -0.18
PXN-218ENST00000551327 DEPDC5O75140 1603 aa13.91□□□□□ -0.18
PXN-218ENST00000551327 ARHGEF5Q12774 1597 aa13.91□□□□□ -0.18
PXN-218ENST00000551327 CROCC2H7BZ55 1655 aa13.91□□□□□ -0.18
PXN-218ENST00000551327 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
PXN-218ENST00000551327 HSPA1LP34931 641 aa13.9□□□□□ -0.18
PXN-218ENST00000551327 TNRQ92752 1358 aa13.9□□□□□ -0.18
PXN-218ENST00000551327 SHANK2Q9UPX8 1470 aa13.9□□□□□ -0.18
PXN-218ENST00000551327 DHX29Q7Z478 1369 aaKnown RBP13.89□□□□□ -0.19
PXN-218ENST00000551327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.89□□□□□ -0.19
PXN-218ENST00000551327 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
PXN-218ENST00000551327 MYO5BQ9ULV0 1848 aa13.89□□□□□ -0.19
PXN-218ENST00000551327 ABCC3O15438 1527 aa13.89□□□□□ -0.19
PXN-218ENST00000551327 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
PXN-218ENST00000551327 PIP4K2BP78356 416 aa13.88□□□□□ -0.19
PXN-218ENST00000551327 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
PXN-218ENST00000551327 CPS1P31327 1500 aa13.87□□□□□ -0.19
PXN-218ENST00000551327 KIF3BO15066 747 aa13.86□□□□□ -0.19
PXN-218ENST00000551327 PKD2Q13563 968 aa13.86□□□□□ -0.19
PXN-218ENST00000551327 MAST1Q9Y2H9 1570 aa13.86□□□□□ -0.19
PXN-218ENST00000551327 EIF2AK4Q9P2K8 1649 aaKnown RBP13.86□□□□□ -0.19
PXN-218ENST00000551327 SYNMO15061 1565 aa13.85□□□□□ -0.19
PXN-218ENST00000551327 MYOM3Q5VTT5 1437 aa13.85□□□□□ -0.19
PXN-218ENST00000551327 PIK3C2BO00750 1634 aa13.84□□□□□ -0.19
PXN-218ENST00000551327 TSPY4P0CV99 314 aa13.84□□□□□ -0.19
PXN-218ENST00000551327 TSPY10P0CW01 314 aa13.84□□□□□ -0.19
PXN-218ENST00000551327 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
PXN-218ENST00000551327 NPHP4O75161 1426 aaPredicted RBP13.83□□□□□ -0.2
PXN-218ENST00000551327 ERVK-7P63135 1459 aa13.83□□□□□ -0.2
PXN-218ENST00000551327 PHF23Q9BUL5 403 aaPredicted RBP13.83□□□□□ -0.2
PXN-218ENST00000551327 MED14O60244 1454 aa13.82□□□□□ -0.2
PXN-218ENST00000551327 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
PXN-218ENST00000551327 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
PXN-218ENST00000551327 APLP2Q06481 763 aa13.8□□□□□ -0.2
PXN-218ENST00000551327 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
PXN-218ENST00000551327 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
PXN-218ENST00000551327 PRDM15P57071 1507 aaPredicted RBP13.76□□□□□ -0.21
PXN-218ENST00000551327 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
PXN-218ENST00000551327 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
PXN-218ENST00000551327 GCC2Q8IWJ2 1684 aa13.73□□□□□ -0.21
PXN-218ENST00000551327 DUOX2Q9NRD8 1548 aa13.73□□□□□ -0.21
PXN-218ENST00000551327 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
PXN-218ENST00000551327 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
PXN-218ENST00000551327 SLIT1O75093 1534 aa13.72□□□□□ -0.21
PXN-218ENST00000551327 SCAF11Q99590 1463 aaKnown RBP13.72□□□□□ -0.21
PXN-218ENST00000551327 FGD6Q6ZV73 1430 aa13.72□□□□□ -0.21
PXN-218ENST00000551327 ERBINQ96RT1 1412 aa13.72□□□□□ -0.21
PXN-218ENST00000551327 TOM1O60784 492 aa13.7□□□□□ -0.22
PXN-218ENST00000551327 LTKP29376 864 aa13.7□□□□□ -0.22
PXN-218ENST00000551327 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
PXN-218ENST00000551327 ABCC5O15440 1437 aa13.7□□□□□ -0.22
PXN-218ENST00000551327 ARHGAP31Q2M1Z3 1444 aa13.7□□□□□ -0.22
PXN-218ENST00000551327 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
PXN-218ENST00000551327 CHD2O14647 1828 aaKnown RBP13.68□□□□□ -0.22
PXN-218ENST00000551327 KDM5AP29375 1690 aaKnown RBP13.68□□□□□ -0.22
PXN-218ENST00000551327 THEMISQ8N1K5 641 aaPredicted RBP13.67□□□□□ -0.22
PXN-218ENST00000551327 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
PXN-218ENST00000551327 ADGRL2O95490 1459 aa13.67□□□□□ -0.22
PXN-218ENST00000551327 DAPK1P53355 1430 aa13.66□□□□□ -0.22
PXN-218ENST00000551327 NWD1Q149M9 1564 aa13.66□□□□□ -0.22
PXN-218ENST00000551327 TET3O43151 1660 aa13.66□□□□□ -0.22
PXN-218ENST00000551327 ANKRD30AQ9BXX3 1397 aa13.65□□□□□ -0.22
PXN-218ENST00000551327 KIF15Q9NS87 1388 aa13.64□□□□□ -0.23
PXN-218ENST00000551327 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
PXN-218ENST00000551327 EFCAB6Q5THR3 1501 aa13.64□□□□□ -0.23
PXN-218ENST00000551327 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
PXN-218ENST00000551327 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
PXN-218ENST00000551327 ROCK1Q13464 1354 aa13.6□□□□□ -0.23
PXN-218ENST00000551327 E9PCH4 1651 aa13.6□□□□□ -0.23
PXN-218ENST00000551327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.23
PXN-218ENST00000551327 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
PXN-218ENST00000551327 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
PXN-218ENST00000551327 TXNDC2Q86VQ3 553 aa13.59□□□□□ -0.23
PXN-218ENST00000551327 TMEM131LA2VDJ0 1609 aa13.59□□□□□ -0.23
PXN-218ENST00000551327 TMEM94Q12767 1356 aa13.58□□□□□ -0.23
PXN-218ENST00000551327 KANK1Q14678 1352 aa13.58□□□□□ -0.23
PXN-218ENST00000551327 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.23
PXN-218ENST00000551327 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms