RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 KIF3BO15066 747 aa14.33□□□□□ -0.12
LETMD1-228ENST00000550929 APLP2Q06481 763 aa14.32□□□□□ -0.12
LETMD1-228ENST00000550929 DHX29Q7Z478 1369 aaKnown RBP14.32□□□□□ -0.12
LETMD1-228ENST00000550929 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
LETMD1-228ENST00000550929 PLXNC1O60486 1568 aa14.31□□□□□ -0.12
LETMD1-228ENST00000550929 SETD1BQ9UPS6 1966 aaKnown RBP14.31□□□□□ -0.12
LETMD1-228ENST00000550929 NCKAP5LQ9HCH0 1330 aa14.31□□□□□ -0.12
LETMD1-228ENST00000550929 CLTCQ00610 1675 aaKnown RBP14.31□□□□□ -0.12
LETMD1-228ENST00000550929 RTEL1-TNFRSF6BF6WH68 1400 aa14.3□□□□□ -0.12
LETMD1-228ENST00000550929 NPATQ14207 1427 aa14.3□□□□□ -0.12
LETMD1-228ENST00000550929 CCDC141Q6ZP82 1450 aa14.29□□□□□ -0.12
LETMD1-228ENST00000550929 LRRC9Q6ZRR7 1453 aa14.29□□□□□ -0.12
LETMD1-228ENST00000550929 TSPY4P0CV99 314 aa14.29□□□□□ -0.12
LETMD1-228ENST00000550929 TSPY10P0CW01 314 aa14.29□□□□□ -0.12
LETMD1-228ENST00000550929 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
LETMD1-228ENST00000550929 PTPRKQ15262 1439 aa14.28□□□□□ -0.12
LETMD1-228ENST00000550929 MROH2AA6NES4 1674 aa14.27□□□□□ -0.12
LETMD1-228ENST00000550929 ADGBQ8N7X0 1667 aa14.27□□□□□ -0.12
LETMD1-228ENST00000550929 FBXO31Q5XUX0 539 aaPredicted RBP14.27□□□□□ -0.12
LETMD1-228ENST00000550929 PTPRTO14522 1441 aa14.27□□□□□ -0.13
LETMD1-228ENST00000550929 NCOA1Q15788 1441 aa14.27□□□□□ -0.13
LETMD1-228ENST00000550929 CAMSAP1Q5T5Y3 1602 aa14.26□□□□□ -0.13
LETMD1-228ENST00000550929 WASHC2CQ9Y4E1 1318 aa14.25□□□□□ -0.13
LETMD1-228ENST00000550929 SAMD1Q6SPF0 538 aaPredicted RBP14.24□□□□□ -0.13
LETMD1-228ENST00000550929 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
LETMD1-228ENST00000550929 ZNF335Q9H4Z2 1342 aaPredicted RBP14.21□□□□□ -0.13
LETMD1-228ENST00000550929 ARHGEF5Q12774 1597 aa14.21□□□□□ -0.13
LETMD1-228ENST00000550929 MYO3AQ8NEV4 1616 aa14.21□□□□□ -0.13
LETMD1-228ENST00000550929 TNRQ92752 1358 aa14.2□□□□□ -0.14
LETMD1-228ENST00000550929 PKD2Q13563 968 aa14.2□□□□□ -0.14
LETMD1-228ENST00000550929 MYOM3Q5VTT5 1437 aa14.2□□□□□ -0.14
LETMD1-228ENST00000550929 CEP170BQ9Y4F5 1589 aaPredicted RBP14.19□□□□□ -0.14
LETMD1-228ENST00000550929 MAP3K1Q13233 1512 aa14.19□□□□□ -0.14
LETMD1-228ENST00000550929 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
LETMD1-228ENST00000550929 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
LETMD1-228ENST00000550929 KDM5DQ9BY66 1539 aa14.17□□□□□ -0.14
LETMD1-228ENST00000550929 A2ML1A8K2U0 1454 aa14.17□□□□□ -0.14
LETMD1-228ENST00000550929 MIA2Q96PC5 1412 aa14.17□□□□□ -0.14
LETMD1-228ENST00000550929 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
LETMD1-228ENST00000550929 RRP7BPQ9NSQ0 103 aa14.17□□□□□ -0.14
LETMD1-228ENST00000550929 PZPP20742 1482 aa14.16□□□□□ -0.14
LETMD1-228ENST00000550929 PLA2R1Q13018 1463 aa14.16□□□□□ -0.14
LETMD1-228ENST00000550929 ZNF142P52746 1687 aaPredicted RBP14.15□□□□□ -0.14
LETMD1-228ENST00000550929 TCOF1Q13428 1488 aaKnown RBP14.15□□□□□ -0.14
LETMD1-228ENST00000550929 DNMT1P26358 1616 aaKnown RBP14.14□□□□□ -0.15
LETMD1-228ENST00000550929 CHIC2Q9UKJ5 165 aa14.14□□□□□ -0.15
LETMD1-228ENST00000550929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.14□□□□□ -0.15
LETMD1-228ENST00000550929 MAST1Q9Y2H9 1570 aa14.13□□□□□ -0.15
LETMD1-228ENST00000550929 UBAP1LF5GYI3 381 aa14.12□□□□□ -0.15
LETMD1-228ENST00000550929 ABCB7O75027 752 aa14.12□□□□□ -0.15
LETMD1-228ENST00000550929 ABCC5O15440 1437 aa14.12□□□□□ -0.15
LETMD1-228ENST00000550929 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
LETMD1-228ENST00000550929 THEMISQ8N1K5 641 aaPredicted RBP14.11□□□□□ -0.15
LETMD1-228ENST00000550929 KIF15Q9NS87 1388 aa14.11□□□□□ -0.15
LETMD1-228ENST00000550929 ABCC3O15438 1527 aa14.1□□□□□ -0.15
LETMD1-228ENST00000550929 FAM135AQ9P2D6 1515 aa14.09□□□□□ -0.15
LETMD1-228ENST00000550929 PTPN23Q9H3S7 1636 aa14.09□□□□□ -0.15
LETMD1-228ENST00000550929 DAPK1P53355 1430 aa14.08□□□□□ -0.16
LETMD1-228ENST00000550929 FGD6Q6ZV73 1430 aa14.08□□□□□ -0.16
LETMD1-228ENST00000550929 DUOX2Q9NRD8 1548 aa14.08□□□□□ -0.16
LETMD1-228ENST00000550929 RNF17Q9BXT8 1623 aaKnown RBP14.08□□□□□ -0.16
LETMD1-228ENST00000550929 FAM50AQ14320 339 aaKnown RBP14.08□□□□□ -0.16
LETMD1-228ENST00000550929 NLRP1Q9C000 1473 aa14.08□□□□□ -0.16
LETMD1-228ENST00000550929 UGGT1Q9NYU2 1555 aa14.07□□□□□ -0.16
LETMD1-228ENST00000550929 MROH1Q8NDA8 1641 aa14.07□□□□□ -0.16
LETMD1-228ENST00000550929 IQSEC2Q5JU85 1478 aa14.07□□□□□ -0.16
LETMD1-228ENST00000550929 DISP3Q9P2K9 1392 aa14.07□□□□□ -0.16
LETMD1-228ENST00000550929 ERVK-7P63135 1459 aa14.06□□□□□ -0.16
LETMD1-228ENST00000550929 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
LETMD1-228ENST00000550929 EIF2AK4Q9P2K8 1649 aaKnown RBP14.05□□□□□ -0.16
LETMD1-228ENST00000550929 NPHP4O75161 1426 aaPredicted RBP14.05□□□□□ -0.16
LETMD1-228ENST00000550929 CEP152O94986 1710 aa14.04□□□□□ -0.16
LETMD1-228ENST00000550929 PIP4K2BP78356 416 aa14.04□□□□□ -0.16
LETMD1-228ENST00000550929 SPATA31D1Q6ZQQ2 1576 aa14.04□□□□□ -0.16
LETMD1-228ENST00000550929 SHANK2Q9UPX8 1470 aa14.04□□□□□ -0.16
LETMD1-228ENST00000550929 ANKRD30AQ9BXX3 1397 aa14.03□□□□□ -0.16
LETMD1-228ENST00000550929 ERBINQ96RT1 1412 aa14.03□□□□□ -0.16
LETMD1-228ENST00000550929 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
LETMD1-228ENST00000550929 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
LETMD1-228ENST00000550929 CROCC2H7BZ55 1655 aa14.02□□□□□ -0.17
LETMD1-228ENST00000550929 ZC3H13Q5T200 1668 aaKnown RBP14.02□□□□□ -0.17
LETMD1-228ENST00000550929 POLR1AO95602 1720 aaPredicted RBP14.02□□□□□ -0.17
LETMD1-228ENST00000550929 CFAP65Q6ZU64 1925 aaKnown RBP14.02□□□□□ -0.17
LETMD1-228ENST00000550929 ILDR2Q71H61 639 aa14.01□□□□□ -0.17
LETMD1-228ENST00000550929 KANK1Q14678 1352 aa14.01□□□□□ -0.17
LETMD1-228ENST00000550929 LTKP29376 864 aa14□□□□□ -0.17
LETMD1-228ENST00000550929 TXNDC2Q86VQ3 553 aa14□□□□□ -0.17
LETMD1-228ENST00000550929 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
LETMD1-228ENST00000550929 MED14O60244 1454 aa13.99□□□□□ -0.17
LETMD1-228ENST00000550929 TOM1O60784 492 aa13.98□□□□□ -0.17
LETMD1-228ENST00000550929 ARHGAP31Q2M1Z3 1444 aa13.98□□□□□ -0.17
LETMD1-228ENST00000550929 PRDM15P57071 1507 aaPredicted RBP13.98□□□□□ -0.17
LETMD1-228ENST00000550929 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
LETMD1-228ENST00000550929 CPS1P31327 1500 aa13.97□□□□□ -0.17
LETMD1-228ENST00000550929 HSPA1LP34931 641 aa13.96□□□□□ -0.17
LETMD1-228ENST00000550929 IDI1Q13907 227 aa13.96□□□□□ -0.17
LETMD1-228ENST00000550929 DEPDC5O75140 1603 aa13.96□□□□□ -0.17
LETMD1-228ENST00000550929 EID1Q9Y6B2 187 aa13.96□□□□□ -0.18
LETMD1-228ENST00000550929 IQGAP1P46940 1657 aa13.95□□□□□ -0.18
LETMD1-228ENST00000550929 SCAF11Q99590 1463 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms