RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 CEP162Q5TB80 1403 aa11.4□□□□□ -0.58
KRR1-204ENST00000550898 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
KRR1-204ENST00000550898 PLEKHD1A6NEE1 506 aa11.38□□□□□ -0.59
KRR1-204ENST00000550898 ST18O60284 1047 aa11.38□□□□□ -0.59
KRR1-204ENST00000550898 TEX14Q8IWB6 1497 aa11.38□□□□□ -0.59
KRR1-204ENST00000550898 CASKIN1Q8WXD9 1431 aa11.37□□□□□ -0.59
KRR1-204ENST00000550898 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
KRR1-204ENST00000550898 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
KRR1-204ENST00000550898 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
KRR1-204ENST00000550898 FYCO1Q9BQS8 1478 aa11.36□□□□□ -0.59
KRR1-204ENST00000550898 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
KRR1-204ENST00000550898 CDK13Q14004 1512 aaKnown RBP11.35□□□□□ -0.59
KRR1-204ENST00000550898 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
KRR1-204ENST00000550898 CCDC18Q5T9S5 1454 aa11.35□□□□□ -0.59
KRR1-204ENST00000550898 PCF11O94913 1555 aaKnown RBP11.35□□□□□ -0.59
KRR1-204ENST00000550898 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
KRR1-204ENST00000550898 PDAP1Q13442 181 aaKnown RBP11.34□□□□□ -0.59
KRR1-204ENST00000550898 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
KRR1-204ENST00000550898 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
KRR1-204ENST00000550898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.66e-6■□□□□ 9.2
KRR1-204ENST00000550898 CFAP43Q8NDM7 1665 aa11.31□□□□□ -0.6
KRR1-204ENST00000550898 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
KRR1-204ENST00000550898 KDM6BO15054 1643 aa11.31□□□□□ -0.6
KRR1-204ENST00000550898 ABCA9Q8IUA7 1624 aa11.31□□□□□ -0.6
KRR1-204ENST00000550898 TROQ12816 1431 aaPredicted RBP11.3□□□□□ -0.6
KRR1-204ENST00000550898 PPRC1Q5VV67 1664 aaKnown RBP11.29□□□□□ -0.6
KRR1-204ENST00000550898 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
KRR1-204ENST00000550898 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
KRR1-204ENST00000550898 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
KRR1-204ENST00000550898 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
KRR1-204ENST00000550898 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
KRR1-204ENST00000550898 TSPOAP1O95153 1857 aa11.27□□□□□ -0.6
KRR1-204ENST00000550898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.27□□□□□ -0.61
KRR1-204ENST00000550898 KIF14Q15058 1648 aa11.27□□□□□ -0.61
KRR1-204ENST00000550898 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
KRR1-204ENST00000550898 NEO1Q92859 1461 aa11.25□□□□□ -0.61
KRR1-204ENST00000550898 CDAN1Q8IWY9 1227 aa11.25□□□□□ -0.61
KRR1-204ENST00000550898 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
KRR1-204ENST00000550898 MTUS2Q5JR59 1369 aa11.23□□□□□ -0.61
KRR1-204ENST00000550898 PLCH2O75038 1416 aa11.23□□□□□ -0.61
KRR1-204ENST00000550898 FANCAO15360 1455 aa11.23□□□□□ -0.61
KRR1-204ENST00000550898 COL17A1Q9UMD9 1497 aaPredicted RBP11.23□□□□□ -0.61
KRR1-204ENST00000550898 ARAP3Q8WWN8 1544 aa11.22□□□□□ -0.61
KRR1-204ENST00000550898 CFAP74Q9C0B2 1584 aa11.21□□□□□ -0.61
KRR1-204ENST00000550898 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
KRR1-204ENST00000550898 MARVELD3Q96A59 401 aa11.21□□□□□ -0.61
KRR1-204ENST00000550898 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
KRR1-204ENST00000550898 LRRIQ1Q96JM4 1722 aa11.21□□□□□ -0.62
KRR1-204ENST00000550898 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
KRR1-204ENST00000550898 EFCAB2Q5VUJ9 269 aa11.2□□□□□ -0.62
KRR1-204ENST00000550898 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
KRR1-204ENST00000550898 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
KRR1-204ENST00000550898 ARHGAP5Q13017 1502 aa11.19□□□□□ -0.62
KRR1-204ENST00000550898 DENND4BO75064 1496 aaPredicted RBP11.19□□□□□ -0.62
KRR1-204ENST00000550898 ADGRL1O94910 1474 aa11.18□□□□□ -0.62
KRR1-204ENST00000550898 CCNB3Q8WWL7 1395 aa11.16□□□□□ -0.62
KRR1-204ENST00000550898 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
KRR1-204ENST00000550898 MAP3K1Q13233 1512 aa11.16□□□□□ -0.62
KRR1-204ENST00000550898 POTEB3A0JP26 581 aa11.16□□□□□ -0.62
KRR1-204ENST00000550898 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
KRR1-204ENST00000550898 POTEBQ6S5H4 581 aa11.16□□□□□ -0.62
KRR1-204ENST00000550898 MYO5CQ9NQX4 1742 aa11.15□□□□□ -0.62
KRR1-204ENST00000550898 BOLA1Q9Y3E2 137 aa11.15□□□□□ -0.62
KRR1-204ENST00000550898 SCAPERQ9BY12 1400 aa11.15□□□□□ -0.62
KRR1-204ENST00000550898 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
KRR1-204ENST00000550898 GPATCH8Q9UKJ3 1502 aaKnown RBP11.14□□□□□ -0.63
KRR1-204ENST00000550898 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
KRR1-204ENST00000550898 LRRC9Q6ZRR7 1453 aa11.13□□□□□ -0.63
KRR1-204ENST00000550898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
KRR1-204ENST00000550898 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
KRR1-204ENST00000550898 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
KRR1-204ENST00000550898 CFDP1Q9UEE9 299 aaPredicted RBP11.13□□□□□ -0.63
KRR1-204ENST00000550898 FRMPD1Q5SYB0 1578 aa11.12□□□□□ -0.63
KRR1-204ENST00000550898 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
KRR1-204ENST00000550898 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
KRR1-204ENST00000550898 ZNF518AQ6AHZ1 1483 aa11.12□□□□□ -0.63
KRR1-204ENST00000550898 ZMYM4Q5VZL5 1548 aa11.11□□□□□ -0.63
KRR1-204ENST00000550898 SNPHO15079 494 aa11.11□□□□□ -0.63
KRR1-204ENST00000550898 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
KRR1-204ENST00000550898 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
KRR1-204ENST00000550898 NCOA2Q15596 1464 aa11.11□□□□□ -0.63
KRR1-204ENST00000550898 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
KRR1-204ENST00000550898 ABCC1P33527 1531 aa11.1□□□□□ -0.63
KRR1-204ENST00000550898 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
KRR1-204ENST00000550898 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
KRR1-204ENST00000550898 PLEKHH2Q8IVE3 1493 aa11.1□□□□□ -0.63
KRR1-204ENST00000550898 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
KRR1-204ENST00000550898 ZFYVE16Q7Z3T8 1539 aa11.09□□□□□ -0.63
KRR1-204ENST00000550898 ARHGEF40Q8TER5 1519 aa11.09□□□□□ -0.63
KRR1-204ENST00000550898 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
KRR1-204ENST00000550898 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
KRR1-204ENST00000550898 KIAA1107Q9UPP5 1409 aa11.08□□□□□ -0.64
KRR1-204ENST00000550898 RICTORQ6R327 1708 aa11.07□□□□□ -0.64
KRR1-204ENST00000550898 CDC42BPBQ9Y5S2 1711 aa11.07□□□□□ -0.64
KRR1-204ENST00000550898 PHF8Q9UPP1 1060 aa11.07□□□□□ -0.64
KRR1-204ENST00000550898 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
KRR1-204ENST00000550898 KDM5CP41229 1560 aa11.07□□□□□ -0.64
KRR1-204ENST00000550898 SAMD9LQ8IVG5 1584 aa11.07□□□□□ -0.64
KRR1-204ENST00000550898 CDC42BPAQ5VT25 1732 aa11.06□□□□□ -0.64
KRR1-204ENST00000550898 SYCP2Q9BX26 1530 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms