RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 UHRF1BP1Q6BDS2 1440 aa18.34■□□□□ 0.53
LETMD1-221ENST00000550100 FAM50AQ14320 339 aaKnown RBP18.33■□□□□ 0.52
LETMD1-221ENST00000550100 NPATQ14207 1427 aa18.32■□□□□ 0.52
LETMD1-221ENST00000550100 KIF15Q9NS87 1388 aa18.32■□□□□ 0.52
LETMD1-221ENST00000550100 SHANK2Q9UPX8 1470 aa18.31■□□□□ 0.52
LETMD1-221ENST00000550100 STRCQ7RTU9 1775 aa18.31■□□□□ 0.52
LETMD1-221ENST00000550100 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
LETMD1-221ENST00000550100 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
LETMD1-221ENST00000550100 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
LETMD1-221ENST00000550100 DUOX2Q9NRD8 1548 aa18.29■□□□□ 0.52
LETMD1-221ENST00000550100 KDM5DQ9BY66 1539 aa18.28■□□□□ 0.52
LETMD1-221ENST00000550100 NCOA1Q15788 1441 aa18.28■□□□□ 0.52
LETMD1-221ENST00000550100 ABCC3O15438 1527 aa18.26■□□□□ 0.51
LETMD1-221ENST00000550100 EIF2AK4Q9P2K8 1649 aaKnown RBP18.25■□□□□ 0.51
LETMD1-221ENST00000550100 PZPP20742 1482 aa18.24■□□□□ 0.51
LETMD1-221ENST00000550100 ILDR1Q86SU0 546 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-221ENST00000550100 ANKRD30AQ9BXX3 1397 aa18.24■□□□□ 0.51
LETMD1-221ENST00000550100 MYO3AQ8NEV4 1616 aa18.23■□□□□ 0.51
LETMD1-221ENST00000550100 ADGRL2O95490 1459 aa18.22■□□□□ 0.51
LETMD1-221ENST00000550100 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
LETMD1-221ENST00000550100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.513e-14■□□□□ 10.9
LETMD1-221ENST00000550100 FAM135AQ9P2D6 1515 aa18.21■□□□□ 0.51
LETMD1-221ENST00000550100 CEP152O94986 1710 aa18.21■□□□□ 0.51
LETMD1-221ENST00000550100 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
LETMD1-221ENST00000550100 CAMSAP1Q5T5Y3 1602 aa18.2■□□□□ 0.5
LETMD1-221ENST00000550100 TNRQ92752 1358 aa18.2■□□□□ 0.5
LETMD1-221ENST00000550100 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
LETMD1-221ENST00000550100 CEP170BQ9Y4F5 1589 aaPredicted RBP18.19■□□□□ 0.5
LETMD1-221ENST00000550100 ZNF142P52746 1687 aaPredicted RBP18.19■□□□□ 0.5
LETMD1-221ENST00000550100 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
LETMD1-221ENST00000550100 ITGAEP38570 1179 aa18.17■□□□□ 0.5
LETMD1-221ENST00000550100 DEPDC5O75140 1603 aa18.17■□□□□ 0.5
LETMD1-221ENST00000550100 A2ML1A8K2U0 1454 aa18.16■□□□□ 0.5
LETMD1-221ENST00000550100 ZC3H13Q5T200 1668 aaKnown RBP18.15■□□□□ 0.5
LETMD1-221ENST00000550100 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
LETMD1-221ENST00000550100 VWDEQ8N2E2 1590 aa18.14■□□□□ 0.49
LETMD1-221ENST00000550100 PTPRTO14522 1441 aa18.14■□□□□ 0.49
LETMD1-221ENST00000550100 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
LETMD1-221ENST00000550100 SPATA31D1Q6ZQQ2 1576 aa18.13■□□□□ 0.49
LETMD1-221ENST00000550100 ANKRD50Q9ULJ7 1429 aa18.13■□□□□ 0.49
LETMD1-221ENST00000550100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.11■□□□□ 0.49
LETMD1-221ENST00000550100 ARHGAP31Q2M1Z3 1444 aa18.11■□□□□ 0.49
LETMD1-221ENST00000550100 CERKQ8TCT0 537 aa18.1■□□□□ 0.49
LETMD1-221ENST00000550100 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
LETMD1-221ENST00000550100 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
LETMD1-221ENST00000550100 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
LETMD1-221ENST00000550100 PKD2Q13563 968 aa18.08■□□□□ 0.49
LETMD1-221ENST00000550100 NLRP1Q9C000 1473 aa18.08■□□□□ 0.49
LETMD1-221ENST00000550100 LMTK2Q8IWU2 1503 aa18.08■□□□□ 0.49
LETMD1-221ENST00000550100 KANK1Q14678 1352 aa18.07■□□□□ 0.48
LETMD1-221ENST00000550100 UGGT1Q9NYU2 1555 aa18.06■□□□□ 0.48
LETMD1-221ENST00000550100 FBXO41Q8TF61 875 aa18.06■□□□□ 0.48
LETMD1-221ENST00000550100 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
LETMD1-221ENST00000550100 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
LETMD1-221ENST00000550100 THEMISQ8N1K5 641 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-221ENST00000550100 ZNF335Q9H4Z2 1342 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-221ENST00000550100 IDI1Q13907 227 aa18.03■□□□□ 0.48
LETMD1-221ENST00000550100 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.48
LETMD1-221ENST00000550100 SYNMO15061 1565 aa18.02■□□□□ 0.48
LETMD1-221ENST00000550100 ANKLE2Q86XL3 938 aa18.01■□□□□ 0.47
LETMD1-221ENST00000550100 NOS1P29475 1434 aa18.01■□□□□ 0.47
LETMD1-221ENST00000550100 UNC13BO14795 1591 aa18.01■□□□□ 0.47
LETMD1-221ENST00000550100 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
LETMD1-221ENST00000550100 LTKP29376 864 aa18■□□□□ 0.47
LETMD1-221ENST00000550100 PIK3C2BO00750 1634 aa17.99■□□□□ 0.47
LETMD1-221ENST00000550100 POLR1AO95602 1720 aaPredicted RBP17.99■□□□□ 0.47
LETMD1-221ENST00000550100 NUP155O75694 1391 aa17.97■□□□□ 0.47
LETMD1-221ENST00000550100 NAIPQ13075 1403 aa17.97■□□□□ 0.47
LETMD1-221ENST00000550100 TET3O43151 1660 aa17.96■□□□□ 0.47
LETMD1-221ENST00000550100 MED14O60244 1454 aa17.96■□□□□ 0.46
LETMD1-221ENST00000550100 ARHGAP23Q9P227 1491 aa17.96■□□□□ 0.46
LETMD1-221ENST00000550100 NPHP4O75161 1426 aaPredicted RBP17.95■□□□□ 0.46
LETMD1-221ENST00000550100 E9PCH4 1651 aa17.94■□□□□ 0.46
LETMD1-221ENST00000550100 IQGAP3Q86VI3 1631 aa17.94■□□□□ 0.46
LETMD1-221ENST00000550100 SLIT1O75093 1534 aa17.93■□□□□ 0.46
LETMD1-221ENST00000550100 TXNDC2Q86VQ3 553 aa17.93■□□□□ 0.46
LETMD1-221ENST00000550100 RPRD2Q5VT52 1461 aaKnown RBP17.93■□□□□ 0.46
LETMD1-221ENST00000550100 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
LETMD1-221ENST00000550100 TMEM2Q9UHN6 1383 aa17.91■□□□□ 0.46
LETMD1-221ENST00000550100 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
LETMD1-221ENST00000550100 SLC52A1Q9NWF4 448 aa17.9■□□□□ 0.46
LETMD1-221ENST00000550100 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.45
LETMD1-221ENST00000550100 IQGAP1P46940 1657 aa17.89■□□□□ 0.45
LETMD1-221ENST00000550100 STRCP1A6NGW2 1772 aa17.88■□□□□ 0.45
LETMD1-221ENST00000550100 MYO5BQ9ULV0 1848 aa17.88■□□□□ 0.45
LETMD1-221ENST00000550100 HFM1A2PYH4 1435 aa17.87■□□□□ 0.45
LETMD1-221ENST00000550100 ADGRB3O60242 1522 aa17.87■□□□□ 0.45
LETMD1-221ENST00000550100 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
LETMD1-221ENST00000550100 KDM5AP29375 1690 aaKnown RBP17.86■□□□□ 0.45
LETMD1-221ENST00000550100 TMEM131LA2VDJ0 1609 aa17.85■□□□□ 0.45
LETMD1-221ENST00000550100 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
LETMD1-221ENST00000550100 ZFYVE9O95405 1425 aa17.83■□□□□ 0.44
LETMD1-221ENST00000550100 IQSEC2Q5JU85 1478 aa17.82■□□□□ 0.44
LETMD1-221ENST00000550100 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
LETMD1-221ENST00000550100 NUTM2DQ5VT03 806 aaPredicted RBP17.82■□□□□ 0.44
LETMD1-221ENST00000550100 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
LETMD1-221ENST00000550100 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
LETMD1-221ENST00000550100 RIMS2Q9UQ26 1411 aa17.8■□□□□ 0.44
LETMD1-221ENST00000550100 CPS1P31327 1500 aa17.79■□□□□ 0.44
LETMD1-221ENST00000550100 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms