RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 DHX29Q7Z478 1369 aaKnown RBP14.75□□□□□ -0.05
USP15-208ENST00000548524 ARHGEF5Q12774 1597 aa14.74□□□□□ -0.05
USP15-208ENST00000548524 KIF3BO15066 747 aa14.73□□□□□ -0.05
USP15-208ENST00000548524 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
USP15-208ENST00000548524 LMTK3Q96Q04 1460 aa14.73□□□□□ -0.05
USP15-208ENST00000548524 PLXNC1O60486 1568 aa14.73□□□□□ -0.05
USP15-208ENST00000548524 HSPA2P54652 639 aa14.72□□□□□ -0.05
USP15-208ENST00000548524 ZMYM3Q14202 1370 aa14.71□□□□□ -0.06
USP15-208ENST00000548524 FGD6Q6ZV73 1430 aa14.7□□□□□ -0.06
USP15-208ENST00000548524 ADGBQ8N7X0 1667 aa14.69□□□□□ -0.06
USP15-208ENST00000548524 UHRF1BP1Q6BDS2 1440 aa14.68□□□□□ -0.06
USP15-208ENST00000548524 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
USP15-208ENST00000548524 PTPN23Q9H3S7 1636 aa14.67□□□□□ -0.06
USP15-208ENST00000548524 FAM50AQ14320 339 aaKnown RBP14.67□□□□□ -0.06
USP15-208ENST00000548524 ABCC5O15440 1437 aa14.66□□□□□ -0.06
USP15-208ENST00000548524 TCOF1Q13428 1488 aaKnown RBP14.66□□□□□ -0.06
USP15-208ENST00000548524 WASHC2CQ9Y4E1 1318 aa14.66□□□□□ -0.06
USP15-208ENST00000548524 MAST1Q9Y2H9 1570 aa14.65□□□□□ -0.06
USP15-208ENST00000548524 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
USP15-208ENST00000548524 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
USP15-208ENST00000548524 DAPK1P53355 1430 aa14.65□□□□□ -0.06
USP15-208ENST00000548524 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
USP15-208ENST00000548524 CHIC2Q9UKJ5 165 aa14.64□□□□□ -0.07
USP15-208ENST00000548524 NPATQ14207 1427 aa14.64□□□□□ -0.07
USP15-208ENST00000548524 SHANK2Q9UPX8 1470 aa14.63□□□□□ -0.07
USP15-208ENST00000548524 KIF15Q9NS87 1388 aa14.63□□□□□ -0.07
USP15-208ENST00000548524 C3P01024 1663 aa14.63□□□□□ -0.07
USP15-208ENST00000548524 CLTCQ00610 1675 aaKnown RBP14.61□□□□□ -0.07
USP15-208ENST00000548524 PREX1Q8TCU6 1659 aa14.61□□□□□ -0.07
USP15-208ENST00000548524 ANKRD30AQ9BXX3 1397 aa14.6□□□□□ -0.07
USP15-208ENST00000548524 PTPRKQ15262 1439 aa14.6□□□□□ -0.07
USP15-208ENST00000548524 MROH2AA6NES4 1674 aa14.6□□□□□ -0.07
USP15-208ENST00000548524 KDM5DQ9BY66 1539 aa14.6□□□□□ -0.07
USP15-208ENST00000548524 DUOX2Q9NRD8 1548 aa14.6□□□□□ -0.07
USP15-208ENST00000548524 FAM135AQ9P2D6 1515 aa14.58□□□□□ -0.08
USP15-208ENST00000548524 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
USP15-208ENST00000548524 DNMT1P26358 1616 aaKnown RBP14.58□□□□□ -0.08
USP15-208ENST00000548524 FBXO31Q5XUX0 539 aaPredicted RBP14.57□□□□□ -0.08
USP15-208ENST00000548524 ERBINQ96RT1 1412 aa14.57□□□□□ -0.08
USP15-208ENST00000548524 TNRQ92752 1358 aa14.56□□□□□ -0.08
USP15-208ENST00000548524 NCOA1Q15788 1441 aa14.55□□□□□ -0.08
USP15-208ENST00000548524 PZPP20742 1482 aa14.55□□□□□ -0.08
USP15-208ENST00000548524 EIF2AK4Q9P2K8 1649 aaKnown RBP14.54□□□□□ -0.08
USP15-208ENST00000548524 CROCC2H7BZ55 1655 aa14.54□□□□□ -0.08
USP15-208ENST00000548524 SETD1BQ9UPS6 1966 aaKnown RBP14.54□□□□□ -0.08
USP15-208ENST00000548524 KANK1Q14678 1352 aa14.53□□□□□ -0.08
USP15-208ENST00000548524 ITGAEP38570 1179 aa14.53□□□□□ -0.08
USP15-208ENST00000548524 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
USP15-208ENST00000548524 RNF17Q9BXT8 1623 aaKnown RBP14.52□□□□□ -0.08
USP15-208ENST00000548524 ABCC3O15438 1527 aa14.52□□□□□ -0.08
USP15-208ENST00000548524 ADGRL2O95490 1459 aa14.52□□□□□ -0.08
USP15-208ENST00000548524 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
USP15-208ENST00000548524 ILDR1Q86SU0 546 aaPredicted RBP14.5□□□□□ -0.09
USP15-208ENST00000548524 A2ML1A8K2U0 1454 aa14.5□□□□□ -0.09
USP15-208ENST00000548524 MYO3AQ8NEV4 1616 aa14.49□□□□□ -0.09
USP15-208ENST00000548524 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
USP15-208ENST00000548524 CAMSAP1Q5T5Y3 1602 aa14.48□□□□□ -0.09
USP15-208ENST00000548524 MROH1Q8NDA8 1641 aa14.48□□□□□ -0.09
USP15-208ENST00000548524 CEP170BQ9Y4F5 1589 aaPredicted RBP14.48□□□□□ -0.09
USP15-208ENST00000548524 CAPN15O75808 1086 aa14.48□□□□□ -0.09
USP15-208ENST00000548524 PKD2Q13563 968 aa14.48□□□□□ -0.09
USP15-208ENST00000548524 PTPRTO14522 1441 aa14.48□□□□□ -0.09
USP15-208ENST00000548524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP15-208ENST00000548524 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
USP15-208ENST00000548524 PRDM15P57071 1507 aaPredicted RBP14.46□□□□□ -0.09
USP15-208ENST00000548524 ZC3H13Q5T200 1668 aaKnown RBP14.46□□□□□ -0.09
USP15-208ENST00000548524 NLRP1Q9C000 1473 aa14.46□□□□□ -0.09
USP15-208ENST00000548524 THEMISQ8N1K5 641 aaPredicted RBP14.46□□□□□ -0.09
USP15-208ENST00000548524 ERVK-7P63135 1459 aa14.45□□□□□ -0.1
USP15-208ENST00000548524 PLA2R1Q13018 1463 aa14.45□□□□□ -0.1
USP15-208ENST00000548524 ARHGAP31Q2M1Z3 1444 aa14.44□□□□□ -0.1
USP15-208ENST00000548524 CACNB1Q02641 598 aaPredicted RBP14.44□□□□□ -0.1
USP15-208ENST00000548524 CERKQ8TCT0 537 aa14.44□□□□□ -0.1
USP15-208ENST00000548524 FBXO41Q8TF61 875 aa14.44□□□□□ -0.1
USP15-208ENST00000548524 STRCQ7RTU9 1775 aa14.44□□□□□ -0.1
USP15-208ENST00000548524 ZNF142P52746 1687 aaPredicted RBP14.43□□□□□ -0.1
USP15-208ENST00000548524 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
USP15-208ENST00000548524 RRBP1Q9P2E9 1410 aaKnown RBP14.42□□□□□ -0.1
USP15-208ENST00000548524 ANKLE2Q86XL3 938 aa14.42□□□□□ -0.1
USP15-208ENST00000548524 LMTK2Q8IWU2 1503 aa14.41□□□□□ -0.1
USP15-208ENST00000548524 DEPDC5O75140 1603 aa14.41□□□□□ -0.1
USP15-208ENST00000548524 CEP152O94986 1710 aa14.41□□□□□ -0.1
USP15-208ENST00000548524 UGGT1Q9NYU2 1555 aa14.41□□□□□ -0.1
USP15-208ENST00000548524 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
USP15-208ENST00000548524 VWDEQ8N2E2 1590 aa14.39□□□□□ -0.11
USP15-208ENST00000548524 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
USP15-208ENST00000548524 NUP155O75694 1391 aa14.36□□□□□ -0.11
USP15-208ENST00000548524 ZNF335Q9H4Z2 1342 aaPredicted RBP14.36□□□□□ -0.11
USP15-208ENST00000548524 IDI1Q13907 227 aa14.35□□□□□ -0.11
USP15-208ENST00000548524 EFCAB6Q5THR3 1501 aa14.35□□□□□ -0.11
USP15-208ENST00000548524 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
USP15-208ENST00000548524 SLC52A1Q9NWF4 448 aa14.34□□□□□ -0.11
USP15-208ENST00000548524 EID1Q9Y6B2 187 aa14.34□□□□□ -0.11
USP15-208ENST00000548524 NPHP4O75161 1426 aaPredicted RBP14.33□□□□□ -0.11
USP15-208ENST00000548524 NOS1P29475 1434 aa14.33□□□□□ -0.11
USP15-208ENST00000548524 RPRD2Q5VT52 1461 aaKnown RBP14.32□□□□□ -0.12
USP15-208ENST00000548524 UNC13BO14795 1591 aa14.31□□□□□ -0.12
USP15-208ENST00000548524 LTBP4Q8N2S1 1624 aa14.3□□□□□ -0.12
USP15-208ENST00000548524 LTKP29376 864 aa14.3□□□□□ -0.12
USP15-208ENST00000548524 TMEM2Q9UHN6 1383 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms