RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
USP15-208ENST00000548524 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
USP15-208ENST00000548524 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
USP15-208ENST00000548524 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
USP15-208ENST00000548524 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
USP15-208ENST00000548524 ABCC9O60706 1549 aa20.37■□□□□ 0.85
USP15-208ENST00000548524 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
USP15-208ENST00000548524 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
USP15-208ENST00000548524 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
USP15-208ENST00000548524 NACADO15069 1562 aa19.41■□□□□ 0.7
USP15-208ENST00000548524 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
USP15-208ENST00000548524 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
USP15-208ENST00000548524 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
USP15-208ENST00000548524 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
USP15-208ENST00000548524 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
USP15-208ENST00000548524 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
USP15-208ENST00000548524 FOXD1Q16676 465 aa18.86■□□□□ 0.61
USP15-208ENST00000548524 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
USP15-208ENST00000548524 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
USP15-208ENST00000548524 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
USP15-208ENST00000548524 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
USP15-208ENST00000548524 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
USP15-208ENST00000548524 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
USP15-208ENST00000548524 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
USP15-208ENST00000548524 ADRA2BP18089 450 aa18.23■□□□□ 0.51
USP15-208ENST00000548524 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
USP15-208ENST00000548524 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
USP15-208ENST00000548524 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
USP15-208ENST00000548524 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
USP15-208ENST00000548524 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
USP15-208ENST00000548524 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
USP15-208ENST00000548524 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
USP15-208ENST00000548524 PIAS4Q8N2W9 510 aaPredicted RBP17.81■□□□□ 0.44
USP15-208ENST00000548524 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
USP15-208ENST00000548524 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
USP15-208ENST00000548524 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
USP15-208ENST00000548524 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
USP15-208ENST00000548524 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
USP15-208ENST00000548524 WIZO95785 1651 aa17.58■□□□□ 0.4
USP15-208ENST00000548524 NESP48681 1621 aa17.55■□□□□ 0.4
USP15-208ENST00000548524 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
USP15-208ENST00000548524 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
USP15-208ENST00000548524 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
USP15-208ENST00000548524 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
USP15-208ENST00000548524 CUX2O14529 1486 aa17.41■□□□□ 0.38
USP15-208ENST00000548524 MSH5O43196 834 aa17.32■□□□□ 0.36
USP15-208ENST00000548524 CFTRP13569 1480 aa17.28■□□□□ 0.36
USP15-208ENST00000548524 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
USP15-208ENST00000548524 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
USP15-208ENST00000548524 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
USP15-208ENST00000548524 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
USP15-208ENST00000548524 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
USP15-208ENST00000548524 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
USP15-208ENST00000548524 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
USP15-208ENST00000548524 WDR62O43379 1518 aa17.12■□□□□ 0.33
USP15-208ENST00000548524 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
USP15-208ENST00000548524 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
USP15-208ENST00000548524 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
USP15-208ENST00000548524 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
USP15-208ENST00000548524 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
USP15-208ENST00000548524 IFT140Q96RY7 1462 aa16.87■□□□□ 0.29
USP15-208ENST00000548524 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
USP15-208ENST00000548524 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
USP15-208ENST00000548524 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
USP15-208ENST00000548524 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
USP15-208ENST00000548524 SOGA1O94964 1423 aa16.74■□□□□ 0.27
USP15-208ENST00000548524 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
USP15-208ENST00000548524 CUX1P39880 1505 aa16.73■□□□□ 0.27
USP15-208ENST00000548524 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
USP15-208ENST00000548524 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
USP15-208ENST00000548524 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.262e-8■■■■□ 20.3
USP15-208ENST00000548524 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
USP15-208ENST00000548524 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
USP15-208ENST00000548524 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
USP15-208ENST00000548524 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
USP15-208ENST00000548524 FBLN2P98095 1184 aa16.61■□□□□ 0.25
USP15-208ENST00000548524 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
USP15-208ENST00000548524 KCNA4P22459 653 aa16.59■□□□□ 0.25
USP15-208ENST00000548524 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
USP15-208ENST00000548524 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
USP15-208ENST00000548524 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
USP15-208ENST00000548524 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
USP15-208ENST00000548524 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
USP15-208ENST00000548524 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
USP15-208ENST00000548524 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
USP15-208ENST00000548524 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
USP15-208ENST00000548524 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
USP15-208ENST00000548524 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
USP15-208ENST00000548524 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
USP15-208ENST00000548524 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
USP15-208ENST00000548524 CHD1O14646 1710 aa16.44■□□□□ 0.22
USP15-208ENST00000548524 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
USP15-208ENST00000548524 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
USP15-208ENST00000548524 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
USP15-208ENST00000548524 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
USP15-208ENST00000548524 ARHGEF11O15085 1522 aa16.38■□□□□ 0.21
USP15-208ENST00000548524 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
USP15-208ENST00000548524 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
USP15-208ENST00000548524 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
USP15-208ENST00000548524 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms