RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
PRIM1-203ENST00000548173 SHANK2Q9UPX8 1470 aa12.28□□□□□ -0.44
PRIM1-203ENST00000548173 CLTCQ00610 1675 aaKnown RBP12.28□□□□□ -0.44
PRIM1-203ENST00000548173 DAPK1P53355 1430 aa12.28□□□□□ -0.44
PRIM1-203ENST00000548173 NPATQ14207 1427 aa12.28□□□□□ -0.44
PRIM1-203ENST00000548173 UHRF1BP1Q6BDS2 1440 aa12.28□□□□□ -0.44
PRIM1-203ENST00000548173 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.44
PRIM1-203ENST00000548173 CROCC2H7BZ55 1655 aa12.26□□□□□ -0.45
PRIM1-203ENST00000548173 PTPRKQ15262 1439 aa12.25□□□□□ -0.45
PRIM1-203ENST00000548173 DUOX2Q9NRD8 1548 aa12.25□□□□□ -0.45
PRIM1-203ENST00000548173 FAM135AQ9P2D6 1515 aa12.25□□□□□ -0.45
PRIM1-203ENST00000548173 KIF15Q9NS87 1388 aa12.24□□□□□ -0.45
PRIM1-203ENST00000548173 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
PRIM1-203ENST00000548173 WASHC2CQ9Y4E1 1318 aa12.24□□□□□ -0.45
PRIM1-203ENST00000548173 RNF17Q9BXT8 1623 aaKnown RBP12.23□□□□□ -0.45
PRIM1-203ENST00000548173 EIF2AK4Q9P2K8 1649 aaKnown RBP12.23□□□□□ -0.45
PRIM1-203ENST00000548173 KDM5DQ9BY66 1539 aa12.23□□□□□ -0.45
PRIM1-203ENST00000548173 FAM50AQ14320 339 aaKnown RBP12.23□□□□□ -0.45
PRIM1-203ENST00000548173 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
PRIM1-203ENST00000548173 NCOA1Q15788 1441 aa12.21□□□□□ -0.45
PRIM1-203ENST00000548173 ERBINQ96RT1 1412 aa12.21□□□□□ -0.45
PRIM1-203ENST00000548173 ANKRD30AQ9BXX3 1397 aa12.21□□□□□ -0.45
PRIM1-203ENST00000548173 PPARGC1BQ86YN6 1023 aaKnown RBP12.21□□□□□ -0.45
PRIM1-203ENST00000548173 PZPP20742 1482 aa12.21□□□□□ -0.46
PRIM1-203ENST00000548173 MROH1Q8NDA8 1641 aa12.2□□□□□ -0.46
PRIM1-203ENST00000548173 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
PRIM1-203ENST00000548173 ADGRL2O95490 1459 aa12.2□□□□□ -0.46
PRIM1-203ENST00000548173 ABCC3O15438 1527 aa12.19□□□□□ -0.46
PRIM1-203ENST00000548173 STRCQ7RTU9 1775 aa12.19□□□□□ -0.46
PRIM1-203ENST00000548173 MYO3AQ8NEV4 1616 aa12.18□□□□□ -0.46
PRIM1-203ENST00000548173 TNRQ92752 1358 aa12.18□□□□□ -0.46
PRIM1-203ENST00000548173 ZC3H13Q5T200 1668 aaKnown RBP12.17□□□□□ -0.46
PRIM1-203ENST00000548173 CEP170BQ9Y4F5 1589 aaPredicted RBP12.17□□□□□ -0.46
PRIM1-203ENST00000548173 PRDM15P57071 1507 aaPredicted RBP12.16□□□□□ -0.46
PRIM1-203ENST00000548173 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
PRIM1-203ENST00000548173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.16□□□□□ -0.46
PRIM1-203ENST00000548173 DEPDC5O75140 1603 aa12.15□□□□□ -0.46
PRIM1-203ENST00000548173 A2ML1A8K2U0 1454 aa12.15□□□□□ -0.46
PRIM1-203ENST00000548173 CAMSAP1Q5T5Y3 1602 aa12.15□□□□□ -0.47
PRIM1-203ENST00000548173 CEP152O94986 1710 aa12.14□□□□□ -0.47
PRIM1-203ENST00000548173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.47
PRIM1-203ENST00000548173 PLA2R1Q13018 1463 aa12.14□□□□□ -0.47
PRIM1-203ENST00000548173 PTPRTO14522 1441 aa12.13□□□□□ -0.47
PRIM1-203ENST00000548173 ARHGAP31Q2M1Z3 1444 aa12.13□□□□□ -0.47
PRIM1-203ENST00000548173 ANKRD50Q9ULJ7 1429 aa12.13□□□□□ -0.47
PRIM1-203ENST00000548173 SPATA31D1Q6ZQQ2 1576 aa12.13□□□□□ -0.47
PRIM1-203ENST00000548173 ILDR1Q86SU0 546 aaPredicted RBP12.12□□□□□ -0.47
PRIM1-203ENST00000548173 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
PRIM1-203ENST00000548173 KANK1Q14678 1352 aa12.12□□□□□ -0.47
PRIM1-203ENST00000548173 ERVK-7P63135 1459 aa12.12□□□□□ -0.47
PRIM1-203ENST00000548173 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
PRIM1-203ENST00000548173 VWDEQ8N2E2 1590 aa12.12□□□□□ -0.47
PRIM1-203ENST00000548173 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
PRIM1-203ENST00000548173 LMTK2Q8IWU2 1503 aa12.11□□□□□ -0.47
PRIM1-203ENST00000548173 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
PRIM1-203ENST00000548173 ITGAEP38570 1179 aa12.1□□□□□ -0.47
PRIM1-203ENST00000548173 PKD2Q13563 968 aa12.1□□□□□ -0.47
PRIM1-203ENST00000548173 CFAP65Q6ZU64 1925 aaKnown RBP12.09□□□□□ -0.47
PRIM1-203ENST00000548173 THEMISQ8N1K5 641 aaPredicted RBP12.08□□□□□ -0.48
PRIM1-203ENST00000548173 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
PRIM1-203ENST00000548173 CERKQ8TCT0 537 aa12.07□□□□□ -0.48
PRIM1-203ENST00000548173 FBXO41Q8TF61 875 aa12.07□□□□□ -0.48
PRIM1-203ENST00000548173 ANKLE2Q86XL3 938 aa12.05□□□□□ -0.48
PRIM1-203ENST00000548173 EFCAB6Q5THR3 1501 aa12.05□□□□□ -0.48
PRIM1-203ENST00000548173 UNC13BO14795 1591 aa12.05□□□□□ -0.48
PRIM1-203ENST00000548173 NOS1P29475 1434 aa12.04□□□□□ -0.48
PRIM1-203ENST00000548173 LTBP4Q8N2S1 1624 aa12.04□□□□□ -0.48
PRIM1-203ENST00000548173 NEURL4Q96JN8 1562 aa12.03□□□□□ -0.48
PRIM1-203ENST00000548173 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
PRIM1-203ENST00000548173 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.48
PRIM1-203ENST00000548173 IDI1Q13907 227 aa12.02□□□□□ -0.49
PRIM1-203ENST00000548173 PPP4R3CPQ6ZMV5 832 aa12.02□□□□□ -0.49
PRIM1-203ENST00000548173 TET3O43151 1660 aa12.02□□□□□ -0.49
PRIM1-203ENST00000548173 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
PRIM1-203ENST00000548173 MED14O60244 1454 aa12.02□□□□□ -0.49
PRIM1-203ENST00000548173 SYNMO15061 1565 aa12.01□□□□□ -0.49
PRIM1-203ENST00000548173 ZNF335Q9H4Z2 1342 aaPredicted RBP12.01□□□□□ -0.49
PRIM1-203ENST00000548173 NUP155O75694 1391 aa12.01□□□□□ -0.49
PRIM1-203ENST00000548173 SLC52A1Q9NWF4 448 aa12□□□□□ -0.49
PRIM1-203ENST00000548173 NPHP4O75161 1426 aaPredicted RBP12□□□□□ -0.49
PRIM1-203ENST00000548173 NAIPQ13075 1403 aa12□□□□□ -0.49
PRIM1-203ENST00000548173 ARHGAP23Q9P227 1491 aa12□□□□□ -0.49
PRIM1-203ENST00000548173 PIK3C2BO00750 1634 aa12□□□□□ -0.49
PRIM1-203ENST00000548173 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
PRIM1-203ENST00000548173 DCAF8L1A6NGE4 600 aa11.99□□□□□ -0.49
PRIM1-203ENST00000548173 SLIT1O75093 1534 aa11.99□□□□□ -0.49
PRIM1-203ENST00000548173 GCC2Q8IWJ2 1684 aa11.99□□□□□ -0.49
PRIM1-203ENST00000548173 LTKP29376 864 aa11.98□□□□□ -0.49
PRIM1-203ENST00000548173 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
PRIM1-203ENST00000548173 E9PCH4 1651 aa11.97□□□□□ -0.49
PRIM1-203ENST00000548173 KDM5AP29375 1690 aaKnown RBP11.97□□□□□ -0.49
PRIM1-203ENST00000548173 SCAF11Q99590 1463 aaKnown RBP11.97□□□□□ -0.49
PRIM1-203ENST00000548173 TMEM2Q9UHN6 1383 aa11.97□□□□□ -0.49
PRIM1-203ENST00000548173 TXNDC2Q86VQ3 553 aa11.97□□□□□ -0.49
PRIM1-203ENST00000548173 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
PRIM1-203ENST00000548173 IQGAP1P46940 1657 aa11.96□□□□□ -0.5
PRIM1-203ENST00000548173 IQSEC2Q5JU85 1478 aa11.95□□□□□ -0.5
PRIM1-203ENST00000548173 EID1Q9Y6B2 187 aa11.95□□□□□ -0.5
PRIM1-203ENST00000548173 ADGRB3O60242 1522 aa11.95□□□□□ -0.5
PRIM1-203ENST00000548173 CPS1P31327 1500 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms