RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 A2MP01023 1474 aa20.36■□□□□ 0.85
C12orf49-202ENST00000547606 MAST1Q9Y2H9 1570 aa20.35■□□□□ 0.85
C12orf49-202ENST00000547606 ADGBQ8N7X0 1667 aa20.35■□□□□ 0.85
C12orf49-202ENST00000547606 ZNF335Q9H4Z2 1342 aaPredicted RBP20.34■□□□□ 0.85
C12orf49-202ENST00000547606 MROH2AA6NES4 1674 aa20.33■□□□□ 0.85
C12orf49-202ENST00000547606 SHANK2Q9UPX8 1470 aa20.33■□□□□ 0.85
C12orf49-202ENST00000547606 CHIC2Q9UKJ5 165 aa20.33■□□□□ 0.85
C12orf49-202ENST00000547606 AGLP35573 1532 aa20.32■□□□□ 0.84
C12orf49-202ENST00000547606 PLXNC1O60486 1568 aa20.31■□□□□ 0.84
C12orf49-202ENST00000547606 ESF1Q9H501 851 aaKnown RBP20.31■□□□□ 0.84
C12orf49-202ENST00000547606 ZNF142P52746 1687 aaPredicted RBP20.3■□□□□ 0.84
C12orf49-202ENST00000547606 ITGAEP38570 1179 aa20.3■□□□□ 0.84
C12orf49-202ENST00000547606 DHX29Q7Z478 1369 aaKnown RBP20.29■□□□□ 0.84
C12orf49-202ENST00000547606 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
C12orf49-202ENST00000547606 RRBP1Q9P2E9 1410 aaKnown RBP20.28■□□□□ 0.84
C12orf49-202ENST00000547606 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
C12orf49-202ENST00000547606 RRP7BPQ9NSQ0 103 aa20.27■□□□□ 0.84
C12orf49-202ENST00000547606 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
C12orf49-202ENST00000547606 ANKRD30AQ9BXX3 1397 aa20.25■□□□□ 0.83
C12orf49-202ENST00000547606 CNTLNQ9NXG0 1405 aa20.25■□□□□ 0.83
C12orf49-202ENST00000547606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.24■□□□□ 0.83
C12orf49-202ENST00000547606 CLTCQ00610 1675 aaKnown RBP20.24■□□□□ 0.83
C12orf49-202ENST00000547606 GGT6Q6P531 493 aa20.24■□□□□ 0.83
C12orf49-202ENST00000547606 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
C12orf49-202ENST00000547606 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
C12orf49-202ENST00000547606 KIF3BO15066 747 aa20.23■□□□□ 0.83
C12orf49-202ENST00000547606 NPATQ14207 1427 aa20.23■□□□□ 0.83
C12orf49-202ENST00000547606 DUOX2Q9NRD8 1548 aa20.22■□□□□ 0.83
C12orf49-202ENST00000547606 HSPA1LP34931 641 aa20.22■□□□□ 0.83
C12orf49-202ENST00000547606 ADGRL2O95490 1459 aa20.21■□□□□ 0.83
C12orf49-202ENST00000547606 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
C12orf49-202ENST00000547606 PLA2R1Q13018 1463 aa20.19■□□□□ 0.82
C12orf49-202ENST00000547606 POLR1AO95602 1720 aaPredicted RBP20.19■□□□□ 0.82
C12orf49-202ENST00000547606 PIP4K2BP78356 416 aa20.18■□□□□ 0.82
C12orf49-202ENST00000547606 ERBINQ96RT1 1412 aa20.17■□□□□ 0.82
C12orf49-202ENST00000547606 EIF2AK4Q9P2K8 1649 aaKnown RBP20.16■□□□□ 0.82
C12orf49-202ENST00000547606 PKD2Q13563 968 aa20.15■□□□□ 0.82
C12orf49-202ENST00000547606 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
C12orf49-202ENST00000547606 ROCK1Q13464 1354 aa20.14■□□□□ 0.81
C12orf49-202ENST00000547606 ZMYM3Q14202 1370 aa20.14■□□□□ 0.81
C12orf49-202ENST00000547606 RNF17Q9BXT8 1623 aaKnown RBP20.13■□□□□ 0.81
C12orf49-202ENST00000547606 PPP6R1Q9UPN7 881 aa20.11■□□□□ 0.81
C12orf49-202ENST00000547606 ANKRD50Q9ULJ7 1429 aa20.1■□□□□ 0.81
C12orf49-202ENST00000547606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.1■□□□□ 0.81
C12orf49-202ENST00000547606 WASHC2CQ9Y4E1 1318 aa20.09■□□□□ 0.81
C12orf49-202ENST00000547606 KDM5DQ9BY66 1539 aa20.09■□□□□ 0.81
C12orf49-202ENST00000547606 CPS1P31327 1500 aa20.08■□□□□ 0.81
C12orf49-202ENST00000547606 TOM1O60784 492 aa20.08■□□□□ 0.81
C12orf49-202ENST00000547606 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
C12orf49-202ENST00000547606 NEURL4Q96JN8 1562 aa20.07■□□□□ 0.8
C12orf49-202ENST00000547606 ALKQ9UM73 1620 aa20.06■□□□□ 0.8
C12orf49-202ENST00000547606 PRDM15P57071 1507 aaPredicted RBP20.05■□□□□ 0.8
C12orf49-202ENST00000547606 ABCC3O15438 1527 aa20.04■□□□□ 0.8
C12orf49-202ENST00000547606 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
C12orf49-202ENST00000547606 DEPDC5O75140 1603 aa20.04■□□□□ 0.8
C12orf49-202ENST00000547606 KANK1Q14678 1352 aa20.03■□□□□ 0.8
C12orf49-202ENST00000547606 CEP152O94986 1710 aa20.02■□□□□ 0.8
C12orf49-202ENST00000547606 ZC3H13Q5T200 1668 aaKnown RBP20.02■□□□□ 0.8
C12orf49-202ENST00000547606 A2ML1A8K2U0 1454 aa20.01■□□□□ 0.79
C12orf49-202ENST00000547606 NAIPQ13075 1403 aa20.01■□□□□ 0.79
C12orf49-202ENST00000547606 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
C12orf49-202ENST00000547606 GCC2Q8IWJ2 1684 aa20■□□□□ 0.79
C12orf49-202ENST00000547606 VWDEQ8N2E2 1590 aa19.99■□□□□ 0.79
C12orf49-202ENST00000547606 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
C12orf49-202ENST00000547606 UNC13BO14795 1591 aa19.97■□□□□ 0.79
C12orf49-202ENST00000547606 STRCP1A6NGW2 1772 aa19.97■□□□□ 0.79
C12orf49-202ENST00000547606 FBXO31Q5XUX0 539 aaPredicted RBP19.96■□□□□ 0.79
C12orf49-202ENST00000547606 PZPP20742 1482 aa19.96■□□□□ 0.79
C12orf49-202ENST00000547606 NUP155O75694 1391 aa19.93■□□□□ 0.78
C12orf49-202ENST00000547606 LMTK2Q8IWU2 1503 aa19.92■□□□□ 0.78
C12orf49-202ENST00000547606 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
C12orf49-202ENST00000547606 TNRQ92752 1358 aa19.9■□□□□ 0.78
C12orf49-202ENST00000547606 EFCAB6Q5THR3 1501 aa19.89■□□□□ 0.77
C12orf49-202ENST00000547606 IQGAP3Q86VI3 1631 aa19.89■□□□□ 0.77
C12orf49-202ENST00000547606 TRIM52Q96A61 297 aa19.89■□□□□ 0.77
C12orf49-202ENST00000547606 RGS17Q9UGC6 210 aaPredicted RBP19.89■□□□□ 0.77
C12orf49-202ENST00000547606 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
C12orf49-202ENST00000547606 ERVK-7P63135 1459 aa19.88■□□□□ 0.77
C12orf49-202ENST00000547606 TET3O43151 1660 aa19.87■□□□□ 0.77
C12orf49-202ENST00000547606 SYNMO15061 1565 aa19.87■□□□□ 0.77
C12orf49-202ENST00000547606 ARHGAP31Q2M1Z3 1444 aa19.87■□□□□ 0.77
C12orf49-202ENST00000547606 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
C12orf49-202ENST00000547606 CFAP65Q6ZU64 1925 aaKnown RBP19.84■□□□□ 0.77
C12orf49-202ENST00000547606 NPHP4O75161 1426 aaPredicted RBP19.84■□□□□ 0.77
C12orf49-202ENST00000547606 LRRC7Q96NW7 1537 aa19.83■□□□□ 0.77
C12orf49-202ENST00000547606 XIRP1Q702N8 1843 aaKnown RBP19.83■□□□□ 0.76
C12orf49-202ENST00000547606 MED14O60244 1454 aa19.81■□□□□ 0.76
C12orf49-202ENST00000547606 ANKLE2Q86XL3 938 aa19.81■□□□□ 0.76
C12orf49-202ENST00000547606 UGGT1Q9NYU2 1555 aa19.81■□□□□ 0.76
C12orf49-202ENST00000547606 E9PCH4 1651 aa19.81■□□□□ 0.76
C12orf49-202ENST00000547606 RPRD2Q5VT52 1461 aaKnown RBP19.8■□□□□ 0.76
C12orf49-202ENST00000547606 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
C12orf49-202ENST00000547606 NLRP1Q9C000 1473 aa19.79■□□□□ 0.76
C12orf49-202ENST00000547606 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
C12orf49-202ENST00000547606 NOS1P29475 1434 aa19.76■□□□□ 0.75
C12orf49-202ENST00000547606 POTEAQ6S8J7 498 aa19.75■□□□□ 0.75
C12orf49-202ENST00000547606 THEMISQ8N1K5 641 aaPredicted RBP19.74■□□□□ 0.75
C12orf49-202ENST00000547606 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
C12orf49-202ENST00000547606 PIK3C2BO00750 1634 aa19.72■□□□□ 0.75
C12orf49-202ENST00000547606 IDI1Q13907 227 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms