RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 DUOX2Q9NRD8 1548 aa36.05■■■■□ 3.36
SMARCC2-204ENST00000547356 UHRF1BP1Q6BDS2 1440 aa36.03■■■■□ 3.36
SMARCC2-204ENST00000547356 KDM5DQ9BY66 1539 aa36.01■■■■□ 3.36
SMARCC2-204ENST00000547356 RNF17Q9BXT8 1623 aaKnown RBP36.01■■■■□ 3.35
SMARCC2-204ENST00000547356 EIF2AK4Q9P2K8 1649 aaKnown RBP36.01■■■■□ 3.35
SMARCC2-204ENST00000547356 PTPRKQ15262 1439 aa36■■■■□ 3.35
SMARCC2-204ENST00000547356 NPATQ14207 1427 aa35.99■■■■□ 3.35
SMARCC2-204ENST00000547356 WASHC2CQ9Y4E1 1318 aa35.98■■■■□ 3.35
SMARCC2-204ENST00000547356 SETD1BQ9UPS6 1966 aaKnown RBP35.98■■■■□ 3.35
SMARCC2-204ENST00000547356 ANKRD30AQ9BXX3 1397 aa35.97■■■■□ 3.35
SMARCC2-204ENST00000547356 MROH1Q8NDA8 1641 aa35.97■■■■□ 3.35
SMARCC2-204ENST00000547356 NCOA1Q15788 1441 aa35.95■■■■□ 3.35
SMARCC2-204ENST00000547356 ERBINQ96RT1 1412 aa35.93■■■■□ 3.34
SMARCC2-204ENST00000547356 FAM135AQ9P2D6 1515 aa35.93■■■■□ 3.34
SMARCC2-204ENST00000547356 ADGRL2O95490 1459 aa35.92■■■■□ 3.34
SMARCC2-204ENST00000547356 ABCC3O15438 1527 aa35.9■■■■□ 3.34
SMARCC2-204ENST00000547356 FBXO31Q5XUX0 539 aaPredicted RBP35.9■■■■□ 3.34
SMARCC2-204ENST00000547356 PZPP20742 1482 aa35.86■■■■□ 3.33
SMARCC2-204ENST00000547356 MYO3AQ8NEV4 1616 aa35.85■■■■□ 3.33
SMARCC2-204ENST00000547356 ITGAEP38570 1179 aa35.84■■■■□ 3.33
SMARCC2-204ENST00000547356 CEP152O94986 1710 aa35.83■■■■□ 3.33
SMARCC2-204ENST00000547356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.83■■■■□ 3.334e-7■■■□□ 18
SMARCC2-204ENST00000547356 PRDM15P57071 1507 aaPredicted RBP35.82■■■■□ 3.32
SMARCC2-204ENST00000547356 ZC3H13Q5T200 1668 aaKnown RBP35.81■■■■□ 3.32
SMARCC2-204ENST00000547356 DEPDC5O75140 1603 aa35.79■■■■□ 3.32
SMARCC2-204ENST00000547356 TNRQ92752 1358 aa35.78■■■■□ 3.32
SMARCC2-204ENST00000547356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.76■■■■□ 3.32
SMARCC2-204ENST00000547356 STRCQ7RTU9 1775 aa35.76■■■■□ 3.32
SMARCC2-204ENST00000547356 CEP170BQ9Y4F5 1589 aaPredicted RBP35.76■■■■□ 3.31
SMARCC2-204ENST00000547356 CAMSAP1Q5T5Y3 1602 aa35.75■■■■□ 3.31
SMARCC2-204ENST00000547356 ZNF142P52746 1687 aaPredicted RBP35.75■■■■□ 3.31
SMARCC2-204ENST00000547356 RRBP1Q9P2E9 1410 aaKnown RBP35.74■■■■□ 3.31
SMARCC2-204ENST00000547356 ANKRD50Q9ULJ7 1429 aa35.74■■■■□ 3.31
SMARCC2-204ENST00000547356 ROCK1Q13464 1354 aa35.7■■■■□ 3.31
SMARCC2-204ENST00000547356 A2ML1A8K2U0 1454 aa35.68■■■■□ 3.3
SMARCC2-204ENST00000547356 ERVK-7P63135 1459 aa35.67■■■■□ 3.3
SMARCC2-204ENST00000547356 KANK1Q14678 1352 aa35.67■■■■□ 3.3
SMARCC2-204ENST00000547356 VWDEQ8N2E2 1590 aa35.66■■■■□ 3.3
SMARCC2-204ENST00000547356 SPATA31D1Q6ZQQ2 1576 aa35.65■■■■□ 3.3
SMARCC2-204ENST00000547356 CFAP65Q6ZU64 1925 aaKnown RBP35.61■■■■□ 3.29
SMARCC2-204ENST00000547356 NCKAP5LQ9HCH0 1330 aa35.6■■■■□ 3.29
SMARCC2-204ENST00000547356 ARHGAP31Q2M1Z3 1444 aa35.6■■■■□ 3.29
SMARCC2-204ENST00000547356 LMTK2Q8IWU2 1503 aa35.6■■■■□ 3.29
SMARCC2-204ENST00000547356 NLRP1Q9C000 1473 aa35.58■■■■□ 3.29
SMARCC2-204ENST00000547356 PLA2R1Q13018 1463 aa35.55■■■■□ 3.28
SMARCC2-204ENST00000547356 DMRT2Q9Y5R5 561 aa35.54■■■■□ 3.28
SMARCC2-204ENST00000547356 UNC13BO14795 1591 aa35.54■■■■□ 3.28
SMARCC2-204ENST00000547356 PTPRTO14522 1441 aa35.52■■■■□ 3.28
SMARCC2-204ENST00000547356 EFCAB6Q5THR3 1501 aa35.52■■■■□ 3.28
SMARCC2-204ENST00000547356 UGGT1Q9NYU2 1555 aa35.51■■■■□ 3.27
SMARCC2-204ENST00000547356 PKD2Q13563 968 aa35.45■■■■□ 3.27
SMARCC2-204ENST00000547356 THEMISQ8N1K5 641 aaPredicted RBP35.43■■■■□ 3.26
SMARCC2-204ENST00000547356 TET3O43151 1660 aa35.42■■■■□ 3.26
SMARCC2-204ENST00000547356 SYNMO15061 1565 aa35.42■■■■□ 3.26
SMARCC2-204ENST00000547356 ILDR1Q86SU0 546 aaPredicted RBP35.41■■■■□ 3.26
SMARCC2-204ENST00000547356 NAIPQ13075 1403 aa35.4■■■■□ 3.26
SMARCC2-204ENST00000547356 NOS1P29475 1434 aa35.4■■■■□ 3.26
SMARCC2-204ENST00000547356 NUP155O75694 1391 aa35.39■■■■□ 3.26
SMARCC2-204ENST00000547356 NEURL4Q96JN8 1562 aa35.38■■■■□ 3.25
SMARCC2-204ENST00000547356 IQGAP3Q86VI3 1631 aa35.38■■■■□ 3.25
SMARCC2-204ENST00000547356 UBR1Q8IWV7 1749 aa35.37■■■■□ 3.25
SMARCC2-204ENST00000547356 PIK3C2BO00750 1634 aa35.36■■■■□ 3.25
SMARCC2-204ENST00000547356 POLR1AO95602 1720 aaPredicted RBP35.36■■■■□ 3.25
SMARCC2-204ENST00000547356 GCC2Q8IWJ2 1684 aa35.36■■■■□ 3.25
SMARCC2-204ENST00000547356 RPRD2Q5VT52 1461 aaKnown RBP35.34■■■■□ 3.25
SMARCC2-204ENST00000547356 IDI1Q13907 227 aa35.33■■■■□ 3.25
SMARCC2-204ENST00000547356 ANKLE2Q86XL3 938 aa35.33■■■■□ 3.25
SMARCC2-204ENST00000547356 CERKQ8TCT0 537 aa35.32■■■■□ 3.24
SMARCC2-204ENST00000547356 E9PCH4 1651 aa35.31■■■■□ 3.24
SMARCC2-204ENST00000547356 HFM1A2PYH4 1435 aa35.3■■■■□ 3.24
SMARCC2-204ENST00000547356 ZNF335Q9H4Z2 1342 aaPredicted RBP35.29■■■■□ 3.24
SMARCC2-204ENST00000547356 LTBP4Q8N2S1 1624 aa35.28■■■■□ 3.24
SMARCC2-204ENST00000547356 STAG3Q9UJ98 1225 aa35.25■■■■□ 3.23
SMARCC2-204ENST00000547356 NPHP4O75161 1426 aaPredicted RBP35.24■■■■□ 3.23
SMARCC2-204ENST00000547356 ARHGAP23Q9P227 1491 aa35.22■■■■□ 3.23
SMARCC2-204ENST00000547356 MED14O60244 1454 aa35.22■■■■□ 3.23
SMARCC2-204ENST00000547356 SLIT1O75093 1534 aa35.22■■■■□ 3.23
SMARCC2-204ENST00000547356 LTKP29376 864 aa35.21■■■■□ 3.23
SMARCC2-204ENST00000547356 FBXO41Q8TF61 875 aa35.21■■■■□ 3.23
SMARCC2-204ENST00000547356 ADGRB3O60242 1522 aa35.2■■■■□ 3.23
SMARCC2-204ENST00000547356 SCAF11Q99590 1463 aaKnown RBP35.19■■■■□ 3.22
SMARCC2-204ENST00000547356 SLC52A1Q9NWF4 448 aa35.19■■■■□ 3.22
SMARCC2-204ENST00000547356 TMEM2Q9UHN6 1383 aa35.18■■■■□ 3.22
SMARCC2-204ENST00000547356 TXNDC2Q86VQ3 553 aa35.17■■■■□ 3.22
SMARCC2-204ENST00000547356 IQGAP1P46940 1657 aa35.17■■■■□ 3.22
SMARCC2-204ENST00000547356 KDM5AP29375 1690 aaKnown RBP35.15■■■■□ 3.22
SMARCC2-204ENST00000547356 TRIM52Q96A61 297 aa35.15■■■■□ 3.22
SMARCC2-204ENST00000547356 EID1Q9Y6B2 187 aa35.1■■■■□ 3.21
SMARCC2-204ENST00000547356 MYO5BQ9ULV0 1848 aa35.09■■■■□ 3.21
SMARCC2-204ENST00000547356 TMEM131LA2VDJ0 1609 aa35.08■■■■□ 3.21
SMARCC2-204ENST00000547356 CHGAP10645 457 aaKnown RBP35.08■■■■□ 3.21
SMARCC2-204ENST00000547356 SPHKAPQ2M3C7 1700 aa35.04■■■■□ 3.2
SMARCC2-204ENST00000547356 SENP3Q9H4L4 574 aaPredicted RBP35.02■■■■□ 3.2
SMARCC2-204ENST00000547356 ZFYVE9O95405 1425 aa34.99■■■■□ 3.19
SMARCC2-204ENST00000547356 SLC4A1APQ9BWU0 796 aaKnown RBP34.99■■■■□ 3.19
SMARCC2-204ENST00000547356 RIMS2Q9UQ26 1411 aa34.98■■■■□ 3.19
SMARCC2-204ENST00000547356 STRCP1A6NGW2 1772 aa34.95■■■■□ 3.19
SMARCC2-204ENST00000547356 IQSEC2Q5JU85 1478 aa34.95■■■■□ 3.19
SMARCC2-204ENST00000547356 NUTM2DQ5VT03 806 aaPredicted RBP34.94■■■■□ 3.18
SMARCC2-204ENST00000547356 CPS1P31327 1500 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms