RNA–Protein interactions for RNA: ENST00000547130.5

PFDN5-204, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-204ENST00000547130 ABCC5O15440 1437 aa18.8■□□□□ 0.6
PFDN5-204ENST00000547130 SETD1BQ9UPS6 1966 aaKnown RBP18.78■□□□□ 0.6
PFDN5-204ENST00000547130 ZMYM3Q14202 1370 aa18.78■□□□□ 0.6
PFDN5-204ENST00000547130 CEP152O94986 1710 aa18.77■□□□□ 0.6
PFDN5-204ENST00000547130 KIF15Q9NS87 1388 aa18.77■□□□□ 0.6
PFDN5-204ENST00000547130 ZNF142P52746 1687 aaPredicted RBP18.76■□□□□ 0.59
PFDN5-204ENST00000547130 NPATQ14207 1427 aa18.76■□□□□ 0.59
PFDN5-204ENST00000547130 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
PFDN5-204ENST00000547130 MROH1Q8NDA8 1641 aa18.74■□□□□ 0.59
PFDN5-204ENST00000547130 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
PFDN5-204ENST00000547130 CEP170BQ9Y4F5 1589 aaPredicted RBP18.72■□□□□ 0.59
PFDN5-204ENST00000547130 CAMSAP1Q5T5Y3 1602 aa18.72■□□□□ 0.59
PFDN5-204ENST00000547130 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
PFDN5-204ENST00000547130 ABCC3O15438 1527 aa18.72■□□□□ 0.59
PFDN5-204ENST00000547130 PRDM15P57071 1507 aaPredicted RBP18.72■□□□□ 0.59
PFDN5-204ENST00000547130 PTPRKQ15262 1439 aa18.72■□□□□ 0.59
PFDN5-204ENST00000547130 ANKRD30AQ9BXX3 1397 aa18.71■□□□□ 0.59
PFDN5-204ENST00000547130 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
PFDN5-204ENST00000547130 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
PFDN5-204ENST00000547130 PZPP20742 1482 aa18.71■□□□□ 0.59
PFDN5-204ENST00000547130 DEPDC5O75140 1603 aa18.71■□□□□ 0.58
PFDN5-204ENST00000547130 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
PFDN5-204ENST00000547130 STRCQ7RTU9 1775 aa18.7■□□□□ 0.58
PFDN5-204ENST00000547130 RRP7BPQ9NSQ0 103 aa18.69■□□□□ 0.58
PFDN5-204ENST00000547130 ADGRL2O95490 1459 aa18.68■□□□□ 0.58
PFDN5-204ENST00000547130 TNRQ92752 1358 aa18.64■□□□□ 0.57
PFDN5-204ENST00000547130 NCOA1Q15788 1441 aa18.64■□□□□ 0.57
PFDN5-204ENST00000547130 A2ML1A8K2U0 1454 aa18.62■□□□□ 0.57
PFDN5-204ENST00000547130 POLR1AO95602 1720 aaPredicted RBP18.61■□□□□ 0.57
PFDN5-204ENST00000547130 SPATA31D1Q6ZQQ2 1576 aa18.61■□□□□ 0.57
PFDN5-204ENST00000547130 KANK1Q14678 1352 aa18.61■□□□□ 0.57
PFDN5-204ENST00000547130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.577e-8■■□□□ 12.6
PFDN5-204ENST00000547130 CFAP65Q6ZU64 1925 aaKnown RBP18.6■□□□□ 0.57
PFDN5-204ENST00000547130 ERVK-7P63135 1459 aa18.59■□□□□ 0.57
PFDN5-204ENST00000547130 FBXO31Q5XUX0 539 aaPredicted RBP18.59■□□□□ 0.57
PFDN5-204ENST00000547130 ITGAEP38570 1179 aa18.58■□□□□ 0.56
PFDN5-204ENST00000547130 PLA2R1Q13018 1463 aa18.58■□□□□ 0.56
PFDN5-204ENST00000547130 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
PFDN5-204ENST00000547130 NLRP1Q9C000 1473 aa18.57■□□□□ 0.56
PFDN5-204ENST00000547130 UNC13BO14795 1591 aa18.56■□□□□ 0.56
PFDN5-204ENST00000547130 VWDEQ8N2E2 1590 aa18.55■□□□□ 0.56
PFDN5-204ENST00000547130 UGGT1Q9NYU2 1555 aa18.55■□□□□ 0.56
PFDN5-204ENST00000547130 EFCAB6Q5THR3 1501 aa18.55■□□□□ 0.56
PFDN5-204ENST00000547130 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
PFDN5-204ENST00000547130 LMTK2Q8IWU2 1503 aa18.54■□□□□ 0.56
PFDN5-204ENST00000547130 PTPRTO14522 1441 aa18.53■□□□□ 0.56
PFDN5-204ENST00000547130 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
PFDN5-204ENST00000547130 ROCK1Q13464 1354 aa18.53■□□□□ 0.56
PFDN5-204ENST00000547130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.53■□□□□ 0.56
PFDN5-204ENST00000547130 TET3O43151 1660 aa18.52■□□□□ 0.56
PFDN5-204ENST00000547130 GCC2Q8IWJ2 1684 aa18.52■□□□□ 0.56
PFDN5-204ENST00000547130 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
PFDN5-204ENST00000547130 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
PFDN5-204ENST00000547130 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
PFDN5-204ENST00000547130 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
PFDN5-204ENST00000547130 NEURL4Q96JN8 1562 aa18.48■□□□□ 0.55
PFDN5-204ENST00000547130 IQGAP3Q86VI3 1631 aa18.48■□□□□ 0.55
PFDN5-204ENST00000547130 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
PFDN5-204ENST00000547130 SYNMO15061 1565 aa18.47■□□□□ 0.55
PFDN5-204ENST00000547130 PKD2Q13563 968 aa18.46■□□□□ 0.55
PFDN5-204ENST00000547130 E9PCH4 1651 aa18.44■□□□□ 0.54
PFDN5-204ENST00000547130 IQGAP1P46940 1657 aa18.44■□□□□ 0.54
PFDN5-204ENST00000547130 RPRD2Q5VT52 1461 aaKnown RBP18.43■□□□□ 0.54
PFDN5-204ENST00000547130 THEMISQ8N1K5 641 aaPredicted RBP18.42■□□□□ 0.54
PFDN5-204ENST00000547130 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
PFDN5-204ENST00000547130 ADGRB3O60242 1522 aa18.41■□□□□ 0.54
PFDN5-204ENST00000547130 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
PFDN5-204ENST00000547130 LTBP4Q8N2S1 1624 aa18.4■□□□□ 0.54
PFDN5-204ENST00000547130 FBXO41Q8TF61 875 aa18.39■□□□□ 0.53
PFDN5-204ENST00000547130 STAG3Q9UJ98 1225 aa18.38■□□□□ 0.53
PFDN5-204ENST00000547130 NPHP4O75161 1426 aaPredicted RBP18.38■□□□□ 0.53
PFDN5-204ENST00000547130 NOS1P29475 1434 aa18.38■□□□□ 0.53
PFDN5-204ENST00000547130 ANKLE2Q86XL3 938 aa18.37■□□□□ 0.53
PFDN5-204ENST00000547130 NUP155O75694 1391 aa18.37■□□□□ 0.53
PFDN5-204ENST00000547130 SCAF11Q99590 1463 aaKnown RBP18.37■□□□□ 0.53
PFDN5-204ENST00000547130 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
PFDN5-204ENST00000547130 SLIT1O75093 1534 aa18.36■□□□□ 0.53
PFDN5-204ENST00000547130 ZNF335Q9H4Z2 1342 aaPredicted RBP18.36■□□□□ 0.53
PFDN5-204ENST00000547130 SPHKAPQ2M3C7 1700 aa18.35■□□□□ 0.53
PFDN5-204ENST00000547130 NAIPQ13075 1403 aa18.35■□□□□ 0.53
PFDN5-204ENST00000547130 MED14O60244 1454 aa18.34■□□□□ 0.53
PFDN5-204ENST00000547130 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.53
PFDN5-204ENST00000547130 HFM1A2PYH4 1435 aa18.33■□□□□ 0.53
PFDN5-204ENST00000547130 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
PFDN5-204ENST00000547130 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
PFDN5-204ENST00000547130 CPS1P31327 1500 aa18.29■□□□□ 0.52
PFDN5-204ENST00000547130 IDI1Q13907 227 aa18.29■□□□□ 0.52
PFDN5-204ENST00000547130 TMEM131LA2VDJ0 1609 aa18.29■□□□□ 0.52
PFDN5-204ENST00000547130 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
PFDN5-204ENST00000547130 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.52
PFDN5-204ENST00000547130 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
PFDN5-204ENST00000547130 STRCP1A6NGW2 1772 aa18.26■□□□□ 0.51
PFDN5-204ENST00000547130 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
PFDN5-204ENST00000547130 LTKP29376 864 aa18.23■□□□□ 0.51
PFDN5-204ENST00000547130 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
PFDN5-204ENST00000547130 CLTCL1P53675 1640 aa18.23■□□□□ 0.51
PFDN5-204ENST00000547130 TRPM2O94759 1503 aa18.23■□□□□ 0.51
PFDN5-204ENST00000547130 RIMS2Q9UQ26 1411 aa18.21■□□□□ 0.51
PFDN5-204ENST00000547130 KIF1BO60333 1816 aa18.21■□□□□ 0.51
PFDN5-204ENST00000547130 PPP1R15AO75807 674 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms