RNA–Protein interactions for RNA: ENST00000546253.5

SLC3A2-222, Transcript of solute carrier family 3 member 2, humanhuman

TSL 4

Gene SLC3A2, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-222ENST00000546253 POLR1AO95602 1720 aaPredicted RBP24.27■■□□□ 1.48
SLC3A2-222ENST00000546253 ANKLE2Q86XL3 938 aa24.25■■□□□ 1.47
SLC3A2-222ENST00000546253 NEURL4Q96JN8 1562 aa24.22■■□□□ 1.47
SLC3A2-222ENST00000546253 RTEL1-TNFRSF6BF6WH68 1400 aa24.22■■□□□ 1.47
SLC3A2-222ENST00000546253 DHX29Q7Z478 1369 aaKnown RBP24.22■■□□□ 1.47
SLC3A2-222ENST00000546253 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
SLC3A2-222ENST00000546253 PZPP20742 1482 aa24.2■■□□□ 1.47
SLC3A2-222ENST00000546253 FBXO31Q5XUX0 539 aaPredicted RBP24.2■■□□□ 1.46
SLC3A2-222ENST00000546253 THEMISQ8N1K5 641 aaPredicted RBP24.2■■□□□ 1.46
SLC3A2-222ENST00000546253 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.46
SLC3A2-222ENST00000546253 FAM135AQ9P2D6 1515 aa24.2■■□□□ 1.46
SLC3A2-222ENST00000546253 KIF3BO15066 747 aa24.19■■□□□ 1.46
SLC3A2-222ENST00000546253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.18■■□□□ 1.46
SLC3A2-222ENST00000546253 ZNF644Q9H582 1327 aaPredicted RBP24.18■■□□□ 1.46
SLC3A2-222ENST00000546253 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
SLC3A2-222ENST00000546253 NLRP1Q9C000 1473 aa24.16■■□□□ 1.46
SLC3A2-222ENST00000546253 MBD5Q9P267 1494 aa24.16■■□□□ 1.46
SLC3A2-222ENST00000546253 NPHP4O75161 1426 aaPredicted RBP24.16■■□□□ 1.46
SLC3A2-222ENST00000546253 TIAM1Q13009 1591 aa24.15■■□□□ 1.46
SLC3A2-222ENST00000546253 VWDEQ8N2E2 1590 aa24.15■■□□□ 1.46
SLC3A2-222ENST00000546253 UGGT1Q9NYU2 1555 aa24.14■■□□□ 1.45
SLC3A2-222ENST00000546253 MIA2Q96PC5 1412 aa24.13■■□□□ 1.45
SLC3A2-222ENST00000546253 EHBP1L1Q8N3D4 1523 aa24.12■■□□□ 1.45
SLC3A2-222ENST00000546253 MED14O60244 1454 aa24.12■■□□□ 1.45
SLC3A2-222ENST00000546253 CCDC141Q6ZP82 1450 aa24.11■■□□□ 1.45
SLC3A2-222ENST00000546253 DEPDC5O75140 1603 aa24.1■■□□□ 1.45
SLC3A2-222ENST00000546253 SENP3Q9H4L4 574 aaPredicted RBP24.09■■□□□ 1.45
SLC3A2-222ENST00000546253 CEP162Q5TB80 1403 aa24.08■■□□□ 1.44
SLC3A2-222ENST00000546253 RSPH4AQ5TD94 716 aa24.07■■□□□ 1.44
SLC3A2-222ENST00000546253 IQGAP1P46940 1657 aa24.06■■□□□ 1.44
SLC3A2-222ENST00000546253 RNF17Q9BXT8 1623 aaKnown RBP24.04■■□□□ 1.44
SLC3A2-222ENST00000546253 ALKQ9UM73 1620 aa24.04■■□□□ 1.44
SLC3A2-222ENST00000546253 SYNMO15061 1565 aa24.03■■□□□ 1.44
SLC3A2-222ENST00000546253 LRRC7Q96NW7 1537 aa24.02■■□□□ 1.44
SLC3A2-222ENST00000546253 CAMSAP2Q08AD1 1489 aa24.01■■□□□ 1.43
SLC3A2-222ENST00000546253 TSPY4P0CV99 314 aa24.01■■□□□ 1.43
SLC3A2-222ENST00000546253 TSPY10P0CW01 314 aa24.01■■□□□ 1.43
SLC3A2-222ENST00000546253 NCOA2Q15596 1464 aa23.94■■□□□ 1.42
SLC3A2-222ENST00000546253 ZC3H13Q5T200 1668 aaKnown RBP23.93■■□□□ 1.42
SLC3A2-222ENST00000546253 ABCC3O15438 1527 aa23.93■■□□□ 1.42
SLC3A2-222ENST00000546253 STRCP1A6NGW2 1772 aa23.93■■□□□ 1.42
SLC3A2-222ENST00000546253 ARHGEF5Q12774 1597 aa23.92■■□□□ 1.42
SLC3A2-222ENST00000546253 ERVK-7P63135 1459 aa23.92■■□□□ 1.42
SLC3A2-222ENST00000546253 SCAF11Q99590 1463 aaKnown RBP23.9■■□□□ 1.42
SLC3A2-222ENST00000546253 RGS17Q9UGC6 210 aaPredicted RBP23.86■■□□□ 1.41
SLC3A2-222ENST00000546253 TXNDC2Q86VQ3 553 aa23.85■■□□□ 1.41
SLC3A2-222ENST00000546253 EID1Q9Y6B2 187 aa23.85■■□□□ 1.41
SLC3A2-222ENST00000546253 EIF2AK4Q9P2K8 1649 aaKnown RBP23.84■■□□□ 1.41
SLC3A2-222ENST00000546253 UBR1Q8IWV7 1749 aa23.83■■□□□ 1.41
SLC3A2-222ENST00000546253 MAST1Q9Y2H9 1570 aa23.81■■□□□ 1.4
SLC3A2-222ENST00000546253 SLIT1O75093 1534 aa23.8■■□□□ 1.4
SLC3A2-222ENST00000546253 LTKP29376 864 aa23.8■■□□□ 1.4
SLC3A2-222ENST00000546253 FAM135BQ49AJ0 1406 aa23.8■■□□□ 1.4
SLC3A2-222ENST00000546253 ARHGAP23Q9P227 1491 aa23.79■■□□□ 1.4
SLC3A2-222ENST00000546253 STAG3Q9UJ98 1225 aa23.77■■□□□ 1.4
SLC3A2-222ENST00000546253 CEP152O94986 1710 aa23.76■■□□□ 1.39
SLC3A2-222ENST00000546253 MROH1Q8NDA8 1641 aa23.76■■□□□ 1.39
SLC3A2-222ENST00000546253 POTEAQ6S8J7 498 aa23.74■■□□□ 1.39
SLC3A2-222ENST00000546253 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
SLC3A2-222ENST00000546253 TMEM94Q12767 1356 aa23.73■■□□□ 1.39
SLC3A2-222ENST00000546253 ARHGAP31Q2M1Z3 1444 aa23.73■■□□□ 1.39
SLC3A2-222ENST00000546253 CFAP65Q6ZU64 1925 aaKnown RBP23.72■■□□□ 1.39
SLC3A2-222ENST00000546253 XIRP1Q702N8 1843 aaKnown RBP23.72■■□□□ 1.39
SLC3A2-222ENST00000546253 TMEM2Q9UHN6 1383 aa23.71■■□□□ 1.39
SLC3A2-222ENST00000546253 LRRC9Q6ZRR7 1453 aa23.69■■□□□ 1.38
SLC3A2-222ENST00000546253 MYOM3Q5VTT5 1437 aa23.68■■□□□ 1.38
SLC3A2-222ENST00000546253 KCNA6P17658 529 aa23.68■■□□□ 1.38
SLC3A2-222ENST00000546253 PROSER2Q86WR7 435 aaPredicted RBP23.68■■□□□ 1.38
SLC3A2-222ENST00000546253 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
SLC3A2-222ENST00000546253 ROBO1Q9Y6N7 1651 aa23.67■■□□□ 1.38
SLC3A2-222ENST00000546253 KANK1Q14678 1352 aa23.66■■□□□ 1.38
SLC3A2-222ENST00000546253 KIF15Q9NS87 1388 aa23.66■■□□□ 1.38
SLC3A2-222ENST00000546253 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
SLC3A2-222ENST00000546253 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
SLC3A2-222ENST00000546253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.65■■□□□ 1.382e-10■■■■■ 27.4
SLC3A2-222ENST00000546253 EFCAB6Q5THR3 1501 aa23.64■■□□□ 1.38
SLC3A2-222ENST00000546253 MSH6P52701 1360 aa23.63■■□□□ 1.37
SLC3A2-222ENST00000546253 SLC26A8Q96RN1 970 aa23.62■■□□□ 1.37
SLC3A2-222ENST00000546253 MAP3K1Q13233 1512 aa23.61■■□□□ 1.37
SLC3A2-222ENST00000546253 BCANQ96GW7 911 aa23.61■■□□□ 1.37
SLC3A2-222ENST00000546253 NKTRP30414 1462 aaKnown RBP23.61■■□□□ 1.37
SLC3A2-222ENST00000546253 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
SLC3A2-222ENST00000546253 KDM5AP29375 1690 aaKnown RBP23.6■■□□□ 1.37
SLC3A2-222ENST00000546253 RBM33Q96EV2 1170 aaKnown RBP23.59■■□□□ 1.37
SLC3A2-222ENST00000546253 JCADQ9P266 1359 aa23.59■■□□□ 1.37
SLC3A2-222ENST00000546253 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.36
SLC3A2-222ENST00000546253 IDI1Q13907 227 aa23.57■■□□□ 1.36
SLC3A2-222ENST00000546253 SLAIN2Q9P270 581 aa23.56■■□□□ 1.36
SLC3A2-222ENST00000546253 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
SLC3A2-222ENST00000546253 TET3O43151 1660 aa23.54■■□□□ 1.36
SLC3A2-222ENST00000546253 PHLPP1O60346 1717 aa23.54■■□□□ 1.36
SLC3A2-222ENST00000546253 NWD1Q149M9 1564 aa23.54■■□□□ 1.36
SLC3A2-222ENST00000546253 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
SLC3A2-222ENST00000546253 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
SLC3A2-222ENST00000546253 ADGRB3O60242 1522 aa23.52■■□□□ 1.36
SLC3A2-222ENST00000546253 LMTK2Q8IWU2 1503 aa23.51■■□□□ 1.35
SLC3A2-222ENST00000546253 CROCC2H7BZ55 1655 aa23.51■■□□□ 1.35
SLC3A2-222ENST00000546253 ABCC5O15440 1437 aa23.5■■□□□ 1.35
SLC3A2-222ENST00000546253 ZNF772Q68DY9 489 aaPredicted RBP23.49■■□□□ 1.35
SLC3A2-222ENST00000546253 SLC52A1Q9NWF4 448 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms