RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 DDRGK1Q96HY6 314 aa18.8■□□□□ 0.6
SRP54-202ENST00000546080 ANKRD50Q9ULJ7 1429 aa18.8■□□□□ 0.6
SRP54-202ENST00000546080 ZNF777Q9ULD5 760 aaPredicted RBP18.79■□□□□ 0.6
SRP54-202ENST00000546080 RTN4Q9NQC3 1192 aaKnown RBP18.79■□□□□ 0.6
SRP54-202ENST00000546080 PRG4Q92954 1404 aaPredicted RBP18.79■□□□□ 0.6
SRP54-202ENST00000546080 KIAA0586Q9BVV6 1533 aa18.78■□□□□ 0.6
SRP54-202ENST00000546080 GPATCH8Q9UKJ3 1502 aaKnown RBP18.78■□□□□ 0.6
SRP54-202ENST00000546080 WASHC2CQ9Y4E1 1318 aa18.78■□□□□ 0.6
SRP54-202ENST00000546080 KDM2AQ9Y2K7 1162 aa18.78■□□□□ 0.6
SRP54-202ENST00000546080 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
SRP54-202ENST00000546080 NUP155O75694 1391 aa18.76■□□□□ 0.59
SRP54-202ENST00000546080 CDCA7LQ96GN5 454 aa18.74■□□□□ 0.59
SRP54-202ENST00000546080 DCAF11Q8TEB1 546 aa18.74■□□□□ 0.59
SRP54-202ENST00000546080 ADCY10Q96PN6 1610 aa18.73■□□□□ 0.59
SRP54-202ENST00000546080 CEP170Q5SW79 1584 aa18.73■□□□□ 0.59
SRP54-202ENST00000546080 PLIN1O60240 522 aa18.72■□□□□ 0.59
SRP54-202ENST00000546080 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
SRP54-202ENST00000546080 KDM5DQ9BY66 1539 aa18.71■□□□□ 0.59
SRP54-202ENST00000546080 BLMP54132 1417 aaPredicted RBP18.69■□□□□ 0.58
SRP54-202ENST00000546080 INSRP06213 1382 aa18.69■□□□□ 0.58
SRP54-202ENST00000546080 ZMYM4Q5VZL5 1548 aa18.68■□□□□ 0.58
SRP54-202ENST00000546080 SHANK2Q9UPX8 1470 aa18.68■□□□□ 0.58
SRP54-202ENST00000546080 C9orf84Q5VXU9 1444 aa18.68■□□□□ 0.58
SRP54-202ENST00000546080 GSE1Q14687 1217 aa18.68■□□□□ 0.58
SRP54-202ENST00000546080 SKAP1Q86WV1 359 aa18.68■□□□□ 0.58
SRP54-202ENST00000546080 PLEKHH2Q8IVE3 1493 aa18.67■□□□□ 0.58
SRP54-202ENST00000546080 DAXXQ9UER7 740 aaPredicted RBP18.66■□□□□ 0.58
SRP54-202ENST00000546080 TRPM1Q7Z4N2 1603 aa18.66■□□□□ 0.58
SRP54-202ENST00000546080 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
SRP54-202ENST00000546080 NFKBIBQ15653 356 aa18.65■□□□□ 0.58
SRP54-202ENST00000546080 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
SRP54-202ENST00000546080 PLB1Q6P1J6 1458 aa18.64■□□□□ 0.57
SRP54-202ENST00000546080 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
SRP54-202ENST00000546080 PTPRGP23470 1445 aa18.63■□□□□ 0.57
SRP54-202ENST00000546080 PRAG1Q86YV5 1406 aa18.63■□□□□ 0.57
SRP54-202ENST00000546080 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
SRP54-202ENST00000546080 KDM2BQ8NHM5 1336 aa18.61■□□□□ 0.57
SRP54-202ENST00000546080 BRPF3Q9ULD4 1205 aa18.61■□□□□ 0.57
SRP54-202ENST00000546080 TSPY4P0CV99 314 aa18.61■□□□□ 0.57
SRP54-202ENST00000546080 TSPY10P0CW01 314 aa18.61■□□□□ 0.57
SRP54-202ENST00000546080 CENPQQ7L2Z9 268 aaPredicted RBP18.61■□□□□ 0.57
SRP54-202ENST00000546080 ZNF608Q9ULD9 1512 aaPredicted RBP18.6■□□□□ 0.57
SRP54-202ENST00000546080 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
SRP54-202ENST00000546080 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
SRP54-202ENST00000546080 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
SRP54-202ENST00000546080 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.59■□□□□ 0.57
SRP54-202ENST00000546080 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.56
SRP54-202ENST00000546080 FAM161AQ3B820 660 aa18.58■□□□□ 0.56
SRP54-202ENST00000546080 FRAT1Q92837 279 aaPredicted RBP18.57■□□□□ 0.56
SRP54-202ENST00000546080 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
SRP54-202ENST00000546080 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
SRP54-202ENST00000546080 DISP3Q9P2K9 1392 aa18.56■□□□□ 0.56
SRP54-202ENST00000546080 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
SRP54-202ENST00000546080 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
SRP54-202ENST00000546080 PANK3Q9H999 370 aa18.56■□□□□ 0.56
SRP54-202ENST00000546080 FAM135AQ9P2D6 1515 aa18.56■□□□□ 0.56
SRP54-202ENST00000546080 LAMC1P11047 1609 aa18.55■□□□□ 0.56
SRP54-202ENST00000546080 PRDM15P57071 1507 aaPredicted RBP18.55■□□□□ 0.56
SRP54-202ENST00000546080 ABCC10Q5T3U5 1492 aa18.54■□□□□ 0.56
SRP54-202ENST00000546080 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
SRP54-202ENST00000546080 ERBINQ96RT1 1412 aa18.54■□□□□ 0.56
SRP54-202ENST00000546080 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
SRP54-202ENST00000546080 RGL3Q3MIN7 710 aa18.52■□□□□ 0.56
SRP54-202ENST00000546080 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.52■□□□□ 0.56
SRP54-202ENST00000546080 TESK2Q96S53 571 aa18.52■□□□□ 0.56
SRP54-202ENST00000546080 TMF1P82094 1093 aa18.51■□□□□ 0.55
SRP54-202ENST00000546080 ADAMTS8Q9UP79 889 aa18.51■□□□□ 0.55
SRP54-202ENST00000546080 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
SRP54-202ENST00000546080 A2MP01023 1474 aa18.51■□□□□ 0.55
SRP54-202ENST00000546080 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
SRP54-202ENST00000546080 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
SRP54-202ENST00000546080 CARMIL2Q6F5E8 1435 aa18.5■□□□□ 0.55
SRP54-202ENST00000546080 HNRNPMP52272 730 aaKnown RBP eCLIP18.49■□□□□ 0.55
SRP54-202ENST00000546080 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
SRP54-202ENST00000546080 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
SRP54-202ENST00000546080 PLEKHH1Q9ULM0 1364 aa18.49■□□□□ 0.55
SRP54-202ENST00000546080 FRAT2O75474 233 aaPredicted RBP18.47■□□□□ 0.55
SRP54-202ENST00000546080 RGS3P49796 1198 aa18.47■□□□□ 0.55
SRP54-202ENST00000546080 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
SRP54-202ENST00000546080 CCDC141Q6ZP82 1450 aa18.45■□□□□ 0.54
SRP54-202ENST00000546080 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
SRP54-202ENST00000546080 ABCA8O94911 1581 aa18.45■□□□□ 0.54
SRP54-202ENST00000546080 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
SRP54-202ENST00000546080 ATP10BO94823 1461 aa18.43■□□□□ 0.54
SRP54-202ENST00000546080 PLA2R1Q13018 1463 aa18.43■□□□□ 0.54
SRP54-202ENST00000546080 NUP160Q12769 1436 aa18.43■□□□□ 0.54
SRP54-202ENST00000546080 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
SRP54-202ENST00000546080 CLASP1Q7Z460 1538 aa18.42■□□□□ 0.54
SRP54-202ENST00000546080 SYNJ2O15056 1496 aa18.42■□□□□ 0.54
SRP54-202ENST00000546080 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
SRP54-202ENST00000546080 KNSTRNQ9Y448 316 aa18.42■□□□□ 0.54
SRP54-202ENST00000546080 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
SRP54-202ENST00000546080 UNC13BO14795 1591 aa18.41■□□□□ 0.54
SRP54-202ENST00000546080 MAGI2Q86UL8 1455 aa18.4■□□□□ 0.54
SRP54-202ENST00000546080 SAMD9LQ8IVG5 1584 aa18.4■□□□□ 0.54
SRP54-202ENST00000546080 SLFN5Q08AF3 891 aa18.4■□□□□ 0.54
SRP54-202ENST00000546080 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
SRP54-202ENST00000546080 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.53
SRP54-202ENST00000546080 WDR7Q9Y4E6 1490 aa18.38■□□□□ 0.53
SRP54-202ENST00000546080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.536e-10■■■□□ 14.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms